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<a href="ga__clustering__operator_8hpp.html">Go to the documentation of this file.</a><div class="fragment"><div class="line"><a name="l00001"></a><span class="lineno">    1</span>&#160;</div><div class="line"><a name="l00013"></a><span class="lineno">   13</span>&#160;<span class="preprocessor">#ifndef __GA_CLUSTERING_OPERATOR_HPP </span></div><div class="line"><a name="l00014"></a><span class="lineno">   14</span>&#160;<span class="preprocessor">#define __GA_CLUSTERING_OPERATOR_HPP  </span></div><div class="line"><a name="l00015"></a><span class="lineno">   15</span>&#160;</div><div class="line"><a name="l00016"></a><span class="lineno">   16</span>&#160;<span class="preprocessor">#include &lt;climits&gt;</span></div><div class="line"><a name="l00017"></a><span class="lineno">   17</span>&#160;<span class="preprocessor">#include &lt;algorithm&gt;</span>  </div><div class="line"><a name="l00018"></a><span class="lineno">   18</span>&#160;<span class="preprocessor">#include &lt;cmath&gt;</span> <span class="comment">//std::round</span></div><div class="line"><a name="l00019"></a><span class="lineno">   19</span>&#160;<span class="preprocessor">#include &lt;iterator&gt;</span></div><div class="line"><a name="l00020"></a><span class="lineno">   20</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="common_8hpp.html">common.hpp</a>&quot;</span></div><div class="line"><a name="l00021"></a><span class="lineno">   21</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="chromosome__cbga_8hpp.html">chromosome_cbga.hpp</a>&quot;</span></div><div class="line"><a name="l00022"></a><span class="lineno">   22</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="chromosome__withrownull_8hpp.html">chromosome_withrownull.hpp</a>&quot;</span></div><div class="line"><a name="l00023"></a><span class="lineno">   23</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="chromosome__feac_8hpp.html">chromosome_feac.hpp</a>&quot;</span></div><div class="line"><a name="l00024"></a><span class="lineno">   24</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="chromosome__gga_8hpp.html">chromosome_gga.hpp</a>&quot;</span></div><div class="line"><a name="l00025"></a><span class="lineno">   25</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="chromosome__variablelength_8hpp.html">chromosome_variablelength.hpp</a>&quot;</span></div><div class="line"><a name="l00026"></a><span class="lineno">   26</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="linear__algebra__level1_8hpp.html">linear_algebra_level1.hpp</a>&quot;</span></div><div class="line"><a name="l00027"></a><span class="lineno">   27</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="linear__algebra__level2_8hpp.html">linear_algebra_level2.hpp</a>&quot;</span></div><div class="line"><a name="l00028"></a><span class="lineno">   28</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="bit__array_8hpp.html">bit_array.hpp</a>&quot;</span></div><div class="line"><a name="l00029"></a><span class="lineno">   29</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="probability__selection_8hpp.html">probability_selection.hpp</a>&quot;</span></div><div class="line"><a name="l00030"></a><span class="lineno">   30</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="vector__utils_8hpp.html">vector_utils.hpp</a>&quot;</span></div><div class="line"><a name="l00031"></a><span class="lineno">   31</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="probability__distribution_8hpp.html">probability_distribution.hpp</a>&quot;</span></div><div class="line"><a name="l00032"></a><span class="lineno">   32</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="ga__selection_8hpp.html">ga_selection.hpp</a>&quot;</span></div><div class="line"><a name="l00033"></a><span class="lineno">   33</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="ga__integer__operator_8hpp.html">ga_integer_operator.hpp</a>&quot;</span></div><div class="line"><a name="l00034"></a><span class="lineno">   34</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="partition__label_8hpp.html">partition_label.hpp</a>&quot;</span></div><div class="line"><a name="l00035"></a><span class="lineno">   35</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="probability__distribution_8hpp.html">probability_distribution.hpp</a>&quot;</span></div><div class="line"><a name="l00036"></a><span class="lineno">   36</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="probability__selection_8hpp.html">probability_selection.hpp</a>&quot;</span></div><div class="line"><a name="l00037"></a><span class="lineno">   37</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="ga__function__objective_8hpp.html">ga_function_objective.hpp</a>&quot;</span></div><div class="line"><a name="l00038"></a><span class="lineno">   38</span>&#160;</div><div class="line"><a name="l00039"></a><span class="lineno"><a class="line" href="ga__clustering__operator_8hpp.html#a4c2ece0f1bd2488ca9dc8853a93fab35">   39</a></span>&#160;<span class="preprocessor">#define  GENETICOPCLUSTER_MAX_GLA  INT_MAX</span></div><div class="line"><a name="l00040"></a><span class="lineno">   40</span>&#160;</div><div class="line"><a name="l00041"></a><span class="lineno">   41</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="verbose__global_8hpp.html">verbose_global.hpp</a>&quot;</span></div><div class="line"><a name="l00042"></a><span class="lineno">   42</span>&#160;</div><div class="line"><a name="l00043"></a><span class="lineno">   43</span>&#160;<span class="keyword">extern</span> <a class="code" href="random__ext_8hpp.html#a096d42d6e488c0b0de08cd7c24ec0099">StdMT19937</a>       <a class="code" href="ga__clustering__operator_8hpp.html#acee5944d570f2fb7efdf1d4c801b30fb">gmt19937_eng</a>;</div><div class="line"><a name="l00044"></a><span class="lineno">   44</span>&#160;</div><div class="line"><a name="l00045"></a><span class="lineno">   45</span>&#160;</div><div class="line"><a name="l00055"></a><span class="lineno">   55</span>&#160;<span class="keyword">namespace </span><a class="code" href="namespacegaclusteringop.html">gaclusteringop</a> {</div><div class="line"><a name="l00056"></a><span class="lineno">   56</span>&#160;  </div><div class="line"><a name="l00064"></a><span class="lineno">   64</span>&#160;<span class="keyword">template</span> &lt;<span class="keyword">typename</span> T_FEATURE, </div><div class="line"><a name="l00065"></a><span class="lineno">   65</span>&#160;           <span class="keyword">typename</span> T_REAL  <span class="comment">//TYPE OF OBJETIVE FUNCTION,</span></div><div class="line"><a name="l00066"></a><span class="lineno">   66</span>&#160;           &gt;</div><div class="line"><a name="l00067"></a><span class="lineno">   67</span>&#160;<a class="code" href="classgaencode_1_1_chrom_variable_length.html">gaencode::ChromVariableLength&lt;T_FEATURE,T_REAL&gt;</a>*</div><div class="line"><a name="l00068"></a><span class="lineno">   68</span>&#160;<a class="code" href="namespacegaclusteringop.html#a182c10ea30b952abe8b98ae7e83f6938">newChromosome</a></div><div class="line"><a name="l00069"></a><span class="lineno"><a class="line" href="namespacegaclusteringop.html#a182c10ea30b952abe8b98ae7e83f6938">   69</a></span>&#160;(<a class="code" href="classmat_1_1_matrix_row.html">mat::MatrixRow&lt;T_FEATURE&gt;</a>&amp; aimatrixrowt_minMaxKSegments,</div><div class="line"><a name="l00070"></a><span class="lineno">   70</span>&#160; T_REAL                     airt_fitnessInitial,</div><div class="line"><a name="l00071"></a><span class="lineno">   71</span>&#160; T_REAL                     airt_objetiveInitial</div><div class="line"><a name="l00072"></a><span class="lineno">   72</span>&#160; )</div><div class="line"><a name="l00073"></a><span class="lineno">   73</span>&#160;{</div><div class="line"><a name="l00074"></a><span class="lineno">   74</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l00075"></a><span class="lineno">   75</span>&#160;  <span class="keyword">const</span> <span class="keywordtype">char</span>* lpc_labelFunc = <span class="stringliteral">&quot;gaclusteringop::newChromosome&quot;</span>;</div><div class="line"><a name="l00076"></a><span class="lineno">   76</span>&#160;  ++geiinparam_verbose;</div><div class="line"><a name="l00077"></a><span class="lineno">   77</span>&#160;  <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l00078"></a><span class="lineno">   78</span>&#160;    std::cout &lt;&lt; lpc_labelFunc</div><div class="line"><a name="l00079"></a><span class="lineno">   79</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;:  IN(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="stringliteral">&quot;)\n&quot;</span></div><div class="line"><a name="l00080"></a><span class="lineno">   80</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;( input aimatrixrowt_minMaxKSegments[&quot;</span>  </div><div class="line"><a name="l00081"></a><span class="lineno">   81</span>&#160;              &lt;&lt; &amp;aimatrixrowt_minMaxKSegments &lt;&lt; <span class="stringliteral">&quot;]\n&quot;</span></div><div class="line"><a name="l00082"></a><span class="lineno">   82</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;  input airt_fitnessInitial = &quot;</span>  &lt;&lt; airt_fitnessInitial</div><div class="line"><a name="l00083"></a><span class="lineno">   83</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;\n input airt_objetiveInitial = &quot;</span> &lt;&lt; airt_objetiveInitial</div><div class="line"><a name="l00084"></a><span class="lineno">   84</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;\n)&quot;</span></div><div class="line"><a name="l00085"></a><span class="lineno">   85</span>&#160;              &lt;&lt; std::endl;</div><div class="line"><a name="l00086"></a><span class="lineno">   86</span>&#160;  }</div><div class="line"><a name="l00087"></a><span class="lineno">   87</span>&#160;<span class="preprocessor">#endif //__VERBOSE_YES</span></div><div class="line"><a name="l00088"></a><span class="lineno">   88</span>&#160;  </div><div class="line"><a name="l00089"></a><span class="lineno">   89</span>&#160;  <a class="code" href="classgaencode_1_1_chrom_variable_length.html">gaencode::ChromVariableLength&lt;T_FEATURE,T_REAL&gt;</a> *lochromvarlength_new =</div><div class="line"><a name="l00090"></a><span class="lineno">   90</span>&#160;    <span class="keyword">new</span> <a class="code" href="classgaencode_1_1_chrom_variable_length.html">gaencode::ChromVariableLength&lt;T_FEATURE,T_REAL&gt;</a></div><div class="line"><a name="l00091"></a><span class="lineno">   91</span>&#160;    ( aimatrixrowt_minMaxKSegments.<a class="code" href="classmat_1_1_matrix_base.html#ac500eedd5e203327d3292f8ab22d8f3e">getNumRows</a>() *</div><div class="line"><a name="l00092"></a><span class="lineno">   92</span>&#160;      <a class="code" href="classdata_1_1_instance.html#a90d1eaeb66cc1470bbfdb95434fdb761">data::Instance&lt;T_FEATURE&gt;::getNumDimensions</a>() );</div><div class="line"><a name="l00093"></a><span class="lineno">   93</span>&#160;         </div><div class="line"><a name="l00094"></a><span class="lineno">   94</span>&#160;  <a class="code" href="classmat_1_1_matrix_row.html">mat::MatrixRow&lt;T_FEATURE&gt;</a> </div><div class="line"><a name="l00095"></a><span class="lineno">   95</span>&#160;    lmatrixrowt_centroidsChrom</div><div class="line"><a name="l00096"></a><span class="lineno">   96</span>&#160;    ( aimatrixrowt_minMaxKSegments.<a class="code" href="classmat_1_1_matrix_base.html#ac500eedd5e203327d3292f8ab22d8f3e">getNumRows</a>(), </div><div class="line"><a name="l00097"></a><span class="lineno">   97</span>&#160;      <a class="code" href="classdata_1_1_instance.html#a90d1eaeb66cc1470bbfdb95434fdb761">data::Instance&lt;T_FEATURE&gt;::getNumDimensions</a>(),</div><div class="line"><a name="l00098"></a><span class="lineno">   98</span>&#160;      lochromvarlength_new-&gt;<a class="code" href="classgaencode_1_1_chrom_variable_length.html#ad2f7938aabc7bb8175344e36b372934d">getString</a>()</div><div class="line"><a name="l00099"></a><span class="lineno">   99</span>&#160;      );</div><div class="line"><a name="l00100"></a><span class="lineno">  100</span>&#160;</div><div class="line"><a name="l00101"></a><span class="lineno">  101</span>&#160;  <span class="keywordflow">for</span> (<a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a> _lui_i =  0;</div><div class="line"><a name="l00102"></a><span class="lineno">  102</span>&#160;       _lui_i &lt; lmatrixrowt_centroidsChrom.getNumRows();</div><div class="line"><a name="l00103"></a><span class="lineno">  103</span>&#160;       _lui_i ++) {</div><div class="line"><a name="l00104"></a><span class="lineno">  104</span>&#160;</div><div class="line"><a name="l00105"></a><span class="lineno">  105</span>&#160;<span class="preprocessor">#if  DATATYPE_CENTROIDS_ROUND == 0</span></div><div class="line"><a name="l00106"></a><span class="lineno">  106</span>&#160;    std::uniform_real_distribution&lt;T_FEATURE&gt;</div><div class="line"><a name="l00107"></a><span class="lineno">  107</span>&#160;      uniformdis_kSegments</div><div class="line"><a name="l00108"></a><span class="lineno">  108</span>&#160;      (aimatrixrowt_minMaxKSegments(_lui_i,0),</div><div class="line"><a name="l00109"></a><span class="lineno">  109</span>&#160;       aimatrixrowt_minMaxKSegments(_lui_i,1)</div><div class="line"><a name="l00110"></a><span class="lineno">  110</span>&#160;       );</div><div class="line"><a name="l00111"></a><span class="lineno">  111</span>&#160;<span class="preprocessor">#else</span></div><div class="line"><a name="l00112"></a><span class="lineno">  112</span>&#160;    std::uniform_int_distribution&lt;T_FEATURE&gt;</div><div class="line"><a name="l00113"></a><span class="lineno">  113</span>&#160;      uniformdis_kSegments</div><div class="line"><a name="l00114"></a><span class="lineno">  114</span>&#160;      (aimatrixrowt_minMaxKSegments(_lui_i,0),</div><div class="line"><a name="l00115"></a><span class="lineno">  115</span>&#160;       aimatrixrowt_minMaxKSegments(_lui_i,1)</div><div class="line"><a name="l00116"></a><span class="lineno">  116</span>&#160;       );</div><div class="line"><a name="l00117"></a><span class="lineno">  117</span>&#160;<span class="preprocessor">#endif //DATATYPE_CENTROIDS_ROUND</span></div><div class="line"><a name="l00118"></a><span class="lineno">  118</span>&#160;           </div><div class="line"><a name="l00119"></a><span class="lineno">  119</span>&#160;    <span class="keywordflow">for</span> (<a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a> _lui_j =  0; _lui_j &lt; lmatrixrowt_centroidsChrom.getNumColumns(); _lui_j ++) {</div><div class="line"><a name="l00120"></a><span class="lineno">  120</span>&#160;      lmatrixrowt_centroidsChrom(_lui_i,_lui_j) = uniformdis_kSegments(<a class="code" href="ga__clustering__operator_8hpp.html#acee5944d570f2fb7efdf1d4c801b30fb">gmt19937_eng</a>);</div><div class="line"><a name="l00121"></a><span class="lineno">  121</span>&#160;    }</div><div class="line"><a name="l00122"></a><span class="lineno">  122</span>&#160;          </div><div class="line"><a name="l00123"></a><span class="lineno">  123</span>&#160;  }</div><div class="line"><a name="l00124"></a><span class="lineno">  124</span>&#160;</div><div class="line"><a name="l00125"></a><span class="lineno">  125</span>&#160;  lochromvarlength_new-&gt;<a class="code" href="classgaencode_1_1_chromosome_base.html#ab136d6f70ea068097d764e5bc34015e1">setFitness</a>(airt_fitnessInitial); </div><div class="line"><a name="l00126"></a><span class="lineno">  126</span>&#160;  lochromvarlength_new-&gt;<a class="code" href="classgaencode_1_1_chromosome_base.html#a0c0f339b486fb7d097d2afac2539ddc8">setObjetiveFunc</a>(airt_objetiveInitial);</div><div class="line"><a name="l00127"></a><span class="lineno">  127</span>&#160;</div><div class="line"><a name="l00128"></a><span class="lineno">  128</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l00129"></a><span class="lineno">  129</span>&#160;  <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l00130"></a><span class="lineno">  130</span>&#160;    std::cout &lt;&lt; lpc_labelFunc</div><div class="line"><a name="l00131"></a><span class="lineno">  131</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;: OUT(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="stringliteral">&quot;)\n&quot;</span>;</div><div class="line"><a name="l00132"></a><span class="lineno">  132</span>&#160;    lochromvarlength_new-&gt;<a class="code" href="classgaencode_1_1_chrom_variable_length.html#ad9aade851fa130ddc0fb16a1dd9a15e1">print</a>(std::cout,lpc_labelFunc);</div><div class="line"><a name="l00133"></a><span class="lineno">  133</span>&#160;    std::cout &lt;&lt; std::endl;</div><div class="line"><a name="l00134"></a><span class="lineno">  134</span>&#160;  }</div><div class="line"><a name="l00135"></a><span class="lineno">  135</span>&#160;  --geiinparam_verbose;</div><div class="line"><a name="l00136"></a><span class="lineno">  136</span>&#160;<span class="preprocessor">#endif //__VERBOSE_YES</span></div><div class="line"><a name="l00137"></a><span class="lineno">  137</span>&#160;  </div><div class="line"><a name="l00138"></a><span class="lineno">  138</span>&#160;  <span class="keywordflow">return</span> lochromvarlength_new;</div><div class="line"><a name="l00139"></a><span class="lineno">  139</span>&#160;  </div><div class="line"><a name="l00140"></a><span class="lineno">  140</span>&#160;}</div><div class="line"><a name="l00141"></a><span class="lineno">  141</span>&#160;    </div><div class="line"><a name="l00142"></a><span class="lineno">  142</span>&#160;  </div><div class="line"><a name="l00143"></a><span class="lineno">  143</span>&#160;<span class="comment">/*CROSSOVER---------------------------------------------------------------------</span></div><div class="line"><a name="l00144"></a><span class="lineno">  144</span>&#160;<span class="comment"> */</span></div><div class="line"><a name="l00145"></a><span class="lineno">  145</span>&#160;</div><div class="line"><a name="l00146"></a><span class="lineno">  146</span>&#160;<span class="comment">/* BEGIN crossPNNnew----------------------------------------------</span></div><div class="line"><a name="l00147"></a><span class="lineno">  147</span>&#160;<span class="comment"> */</span></div><div class="line"><a name="l00148"></a><span class="lineno">  148</span>&#160;</div><div class="line"><a name="l00159"></a><span class="lineno">  159</span>&#160;<span class="keyword">template</span> &lt;<span class="keyword">typename</span> T_FEATURE, </div><div class="line"><a name="l00160"></a><span class="lineno">  160</span>&#160;          <span class="keyword">typename</span> T_CLUSTERIDX,</div><div class="line"><a name="l00161"></a><span class="lineno">  161</span>&#160;          <span class="keyword">typename</span> T_INSTANCE_FREQUENCY,</div><div class="line"><a name="l00162"></a><span class="lineno">  162</span>&#160;          <span class="keyword">typename</span> T_INSTANCES_CLUSTER_K,</div><div class="line"><a name="l00163"></a><span class="lineno">  163</span>&#160;          <span class="keyword">typename</span> T_FEATURE_SUM,</div><div class="line"><a name="l00164"></a><span class="lineno">  164</span>&#160;          <span class="keyword">typename</span> T_REAL,</div><div class="line"><a name="l00165"></a><span class="lineno">  165</span>&#160;          <span class="keyword">typename</span> INPUT_ITERATOR</div><div class="line"><a name="l00166"></a><span class="lineno">  166</span>&#160;          &gt;</div><div class="line"><a name="l00167"></a><span class="lineno">  167</span>&#160;<span class="keywordtype">void</span> <a class="code" href="namespacegaclusteringop.html#a3ecbd55894b1ddbc7bf49a22df7cde00">merge</a></div><div class="line"><a name="l00168"></a><span class="lineno"><a class="line" href="namespacegaclusteringop.html#a3ecbd55894b1ddbc7bf49a22df7cde00">  168</a></span>&#160;(<a class="code" href="classgaencode_1_1_chromosome_c_b_g_a.html">gaencode::ChromosomeCBGA</a></div><div class="line"><a name="l00169"></a><span class="lineno">  169</span>&#160; &lt;T_FEATURE,</div><div class="line"><a name="l00170"></a><span class="lineno">  170</span>&#160; T_CLUSTERIDX,</div><div class="line"><a name="l00171"></a><span class="lineno">  171</span>&#160; T_INSTANCE_FREQUENCY,</div><div class="line"><a name="l00172"></a><span class="lineno">  172</span>&#160; T_INSTANCES_CLUSTER_K,</div><div class="line"><a name="l00173"></a><span class="lineno">  173</span>&#160; T_FEATURE_SUM,</div><div class="line"><a name="l00174"></a><span class="lineno">  174</span>&#160; T_REAL&gt;                             &amp;aiochromcbga_offspring,</div><div class="line"><a name="l00175"></a><span class="lineno">  175</span>&#160; <a class="code" href="classgaencode_1_1_chromosome_c_b_g_a.html">gaencode::ChromosomeCBGA</a></div><div class="line"><a name="l00176"></a><span class="lineno">  176</span>&#160; &lt;T_FEATURE,</div><div class="line"><a name="l00177"></a><span class="lineno">  177</span>&#160; T_CLUSTERIDX,</div><div class="line"><a name="l00178"></a><span class="lineno">  178</span>&#160; T_INSTANCE_FREQUENCY,</div><div class="line"><a name="l00179"></a><span class="lineno">  179</span>&#160; T_INSTANCES_CLUSTER_K,</div><div class="line"><a name="l00180"></a><span class="lineno">  180</span>&#160; T_FEATURE_SUM,</div><div class="line"><a name="l00181"></a><span class="lineno">  181</span>&#160; T_REAL&gt;                             &amp;aiochromcbga_part1,</div><div class="line"><a name="l00182"></a><span class="lineno">  182</span>&#160; <a class="code" href="classgaencode_1_1_chromosome_c_b_g_a.html">gaencode::ChromosomeCBGA</a></div><div class="line"><a name="l00183"></a><span class="lineno">  183</span>&#160; &lt;T_FEATURE,</div><div class="line"><a name="l00184"></a><span class="lineno">  184</span>&#160; T_CLUSTERIDX,</div><div class="line"><a name="l00185"></a><span class="lineno">  185</span>&#160; T_INSTANCE_FREQUENCY,</div><div class="line"><a name="l00186"></a><span class="lineno">  186</span>&#160; T_INSTANCES_CLUSTER_K,</div><div class="line"><a name="l00187"></a><span class="lineno">  187</span>&#160; T_FEATURE_SUM,</div><div class="line"><a name="l00188"></a><span class="lineno">  188</span>&#160; T_REAL&gt;                             &amp;aiochromcbga_part2,</div><div class="line"><a name="l00189"></a><span class="lineno">  189</span>&#160; INPUT_ITERATOR                      aiiterator_instfirst,</div><div class="line"><a name="l00190"></a><span class="lineno">  190</span>&#160; <span class="keyword">const</span> INPUT_ITERATOR                aiiterator_instlast,</div><div class="line"><a name="l00191"></a><span class="lineno">  191</span>&#160; <span class="keyword">const</span> <a class="code" href="structdist_1_1_dist.html">dist::Dist&lt;T_REAL,T_FEATURE&gt;</a>  &amp;aifunc2p_dist</div><div class="line"><a name="l00192"></a><span class="lineno">  192</span>&#160; )</div><div class="line"><a name="l00193"></a><span class="lineno">  193</span>&#160;{</div><div class="line"><a name="l00194"></a><span class="lineno">  194</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l00195"></a><span class="lineno">  195</span>&#160;</div><div class="line"><a name="l00196"></a><span class="lineno">  196</span>&#160;  <span class="keyword">const</span> <span class="keywordtype">char</span>* lpc_labelFunc = <span class="stringliteral">&quot;gaclusteringop::merge&quot;</span>;</div><div class="line"><a name="l00197"></a><span class="lineno">  197</span>&#160;  ++geiinparam_verbose;</div><div class="line"><a name="l00198"></a><span class="lineno">  198</span>&#160;  <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l00199"></a><span class="lineno">  199</span>&#160;    std::cout &lt;&lt; lpc_labelFunc</div><div class="line"><a name="l00200"></a><span class="lineno">  200</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;:  IN(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="stringliteral">&quot;)\n&quot;</span>;</div><div class="line"><a name="l00201"></a><span class="lineno">  201</span>&#160;    std::ostringstream lostrstream_labeoffspring;</div><div class="line"><a name="l00202"></a><span class="lineno">  202</span>&#160;    lostrstream_labeoffspring &lt;&lt; lpc_labelFunc &lt;&lt; <span class="stringliteral">&quot;:aiochromcbga_offspring&quot;</span>;</div><div class="line"><a name="l00203"></a><span class="lineno">  203</span>&#160;    aiochromcbga_offspring.print(std::cout,lostrstream_labeoffspring.str().c_str(),<span class="charliteral">&#39;,&#39;</span>,<span class="charliteral">&#39;;&#39;</span>);</div><div class="line"><a name="l00204"></a><span class="lineno">  204</span>&#160;    std::cout &lt;&lt; <span class="charliteral">&#39;\n&#39;</span>;</div><div class="line"><a name="l00205"></a><span class="lineno">  205</span>&#160;    std::ostringstream lostrstream_labelPart1;</div><div class="line"><a name="l00206"></a><span class="lineno">  206</span>&#160;    lostrstream_labelPart1 &lt;&lt; lpc_labelFunc &lt;&lt; <span class="stringliteral">&quot;:aiochromcbga_part1&quot;</span>;</div><div class="line"><a name="l00207"></a><span class="lineno">  207</span>&#160;    aiochromcbga_part1.print(std::cout,lostrstream_labelPart1.str().c_str(),<span class="charliteral">&#39;,&#39;</span>,<span class="charliteral">&#39;;&#39;</span>);</div><div class="line"><a name="l00208"></a><span class="lineno">  208</span>&#160;    std::cout &lt;&lt; <span class="charliteral">&#39;\n&#39;</span>;</div><div class="line"><a name="l00209"></a><span class="lineno">  209</span>&#160;    std::ostringstream lostrstream_labelPart2;</div><div class="line"><a name="l00210"></a><span class="lineno">  210</span>&#160;    lostrstream_labelPart2 &lt;&lt; lpc_labelFunc &lt;&lt; <span class="stringliteral">&quot;:aiochromcbga_part2&quot;</span>;</div><div class="line"><a name="l00211"></a><span class="lineno">  211</span>&#160;    aiochromcbga_part2.print(std::cout,lostrstream_labelPart2.str().c_str(),<span class="charliteral">&#39;,&#39;</span>,<span class="charliteral">&#39;;&#39;</span>);</div><div class="line"><a name="l00212"></a><span class="lineno">  212</span>&#160;    </div><div class="line"><a name="l00213"></a><span class="lineno">  213</span>&#160;    std::cout &lt;&lt; <span class="stringliteral">&quot;\ninput aiiterator_instfirst[&quot;</span> &lt;&lt; *aiiterator_instfirst &lt;&lt; <span class="stringliteral">&quot;]\n&quot;</span></div><div class="line"><a name="l00214"></a><span class="lineno">  214</span>&#160;              &lt;&lt; <span class="stringliteral">&quot; input const aiiterator_instlast[&quot;</span> &lt;&lt; &amp;aiiterator_instlast &lt;&lt; <span class="stringliteral">&quot;]\n&quot;</span></div><div class="line"><a name="l00215"></a><span class="lineno">  215</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;input  dist::Dist&lt;T_REAL,T_FEATURE&gt; &amp;aifunc2p_dist[&quot;</span> </div><div class="line"><a name="l00216"></a><span class="lineno">  216</span>&#160;              &lt;&lt; &amp;aifunc2p_dist &lt;&lt; <span class="stringliteral">&quot;]\n&quot;</span></div><div class="line"><a name="l00217"></a><span class="lineno">  217</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;)&quot;</span></div><div class="line"><a name="l00218"></a><span class="lineno">  218</span>&#160;              &lt;&lt; std::endl;</div><div class="line"><a name="l00219"></a><span class="lineno">  219</span>&#160;  }</div><div class="line"><a name="l00220"></a><span class="lineno">  220</span>&#160;<span class="preprocessor">#endif //__VERBOSE_YES</span></div><div class="line"><a name="l00221"></a><span class="lineno">  221</span>&#160;</div><div class="line"><a name="l00222"></a><span class="lineno">  222</span>&#160;  <a class="code" href="classds_1_1_partition_linked_stats.html">ds::PartitionLinkedStats</a></div><div class="line"><a name="l00223"></a><span class="lineno">  223</span>&#160;    &lt;T_FEATURE,</div><div class="line"><a name="l00224"></a><span class="lineno">  224</span>&#160;     T_CLUSTERIDX, <span class="comment">//-1, 0, 1, .., K</span></div><div class="line"><a name="l00225"></a><span class="lineno">  225</span>&#160;     T_INSTANCE_FREQUENCY,</div><div class="line"><a name="l00226"></a><span class="lineno">  226</span>&#160;     T_INSTANCES_CLUSTER_K,</div><div class="line"><a name="l00227"></a><span class="lineno">  227</span>&#160;     T_FEATURE_SUM</div><div class="line"><a name="l00228"></a><span class="lineno">  228</span>&#160;     &gt;  &amp;lpartlinkstats_offspring  =  aiochromcbga_offspring.getPartition();</div><div class="line"><a name="l00229"></a><span class="lineno">  229</span>&#160;</div><div class="line"><a name="l00230"></a><span class="lineno">  230</span>&#160;  <a class="code" href="classds_1_1_partition_linked_stats.html">ds::PartitionLinkedStats</a></div><div class="line"><a name="l00231"></a><span class="lineno">  231</span>&#160;    &lt;T_FEATURE,</div><div class="line"><a name="l00232"></a><span class="lineno">  232</span>&#160;     T_CLUSTERIDX, <span class="comment">//-1, 0, 1, .., K</span></div><div class="line"><a name="l00233"></a><span class="lineno">  233</span>&#160;     T_INSTANCE_FREQUENCY,</div><div class="line"><a name="l00234"></a><span class="lineno">  234</span>&#160;     T_INSTANCES_CLUSTER_K,</div><div class="line"><a name="l00235"></a><span class="lineno">  235</span>&#160;     T_FEATURE_SUM</div><div class="line"><a name="l00236"></a><span class="lineno">  236</span>&#160;     &gt;  &amp;aipartition_chromPart1  =  aiochromcbga_part1.getPartition();</div><div class="line"><a name="l00237"></a><span class="lineno">  237</span>&#160;</div><div class="line"><a name="l00238"></a><span class="lineno">  238</span>&#160;  <a class="code" href="classds_1_1_partition_linked_stats.html">ds::PartitionLinkedStats</a></div><div class="line"><a name="l00239"></a><span class="lineno">  239</span>&#160;    &lt;T_FEATURE,</div><div class="line"><a name="l00240"></a><span class="lineno">  240</span>&#160;     T_CLUSTERIDX, <span class="comment">//-1, 0, 1, .., K</span></div><div class="line"><a name="l00241"></a><span class="lineno">  241</span>&#160;     T_INSTANCE_FREQUENCY,</div><div class="line"><a name="l00242"></a><span class="lineno">  242</span>&#160;     T_INSTANCES_CLUSTER_K,</div><div class="line"><a name="l00243"></a><span class="lineno">  243</span>&#160;     T_FEATURE_SUM</div><div class="line"><a name="l00244"></a><span class="lineno">  244</span>&#160;     &gt;  &amp;aipartition_chromPart2  =  aiochromcbga_part2.getPartition();</div><div class="line"><a name="l00245"></a><span class="lineno">  245</span>&#160;   </div><div class="line"><a name="l00246"></a><span class="lineno">  246</span>&#160;  <a class="code" href="classmat_1_1_matrix_resizable_row.html">mat::MatrixResizableRow&lt;T_FEATURE,T_INSTANCES_CLUSTER_K&gt;</a></div><div class="line"><a name="l00247"></a><span class="lineno">  247</span>&#160;    &amp;aiomatrixresizerow_offspring = aiochromcbga_offspring.getCodeBook();</div><div class="line"><a name="l00248"></a><span class="lineno">  248</span>&#160;</div><div class="line"><a name="l00249"></a><span class="lineno">  249</span>&#160;  <a class="code" href="classmat_1_1_matrix_resizable_row.html">mat::MatrixResizableRow&lt;T_FEATURE,T_INSTANCES_CLUSTER_K&gt;</a></div><div class="line"><a name="l00250"></a><span class="lineno">  250</span>&#160;    &amp;aiomatrixresizerow_chromPart1 = aiochromcbga_part1.getCodeBook();</div><div class="line"><a name="l00251"></a><span class="lineno">  251</span>&#160;</div><div class="line"><a name="l00252"></a><span class="lineno">  252</span>&#160;  <a class="code" href="classmat_1_1_matrix_resizable_row.html">mat::MatrixResizableRow&lt;T_FEATURE,T_INSTANCES_CLUSTER_K&gt;</a></div><div class="line"><a name="l00253"></a><span class="lineno">  253</span>&#160;    &amp;aiomatrixresizerow_chromPart2 = aiochromcbga_part2.getCodeBook();</div><div class="line"><a name="l00254"></a><span class="lineno">  254</span>&#160;</div><div class="line"><a name="l00255"></a><span class="lineno">  255</span>&#160;  aiomatrixresizerow_offspring.<a class="code" href="classmat_1_1_matrix_resizable_row.html#a7dfaaa9e49857a46c3b3977dd741f5f9">merge</a></div><div class="line"><a name="l00256"></a><span class="lineno">  256</span>&#160;    (aiomatrixresizerow_chromPart1,</div><div class="line"><a name="l00257"></a><span class="lineno">  257</span>&#160;     aiomatrixresizerow_chromPart2</div><div class="line"><a name="l00258"></a><span class="lineno">  258</span>&#160;     );</div><div class="line"><a name="l00259"></a><span class="lineno">  259</span>&#160;</div><div class="line"><a name="l00260"></a><span class="lineno">  260</span>&#160;  lpartlinkstats_offspring = aiochromcbga_part1.getPartition();</div><div class="line"><a name="l00261"></a><span class="lineno">  261</span>&#160;  </div><div class="line"><a name="l00262"></a><span class="lineno">  262</span>&#160;  lpartlinkstats_offspring.resize(aiomatrixresizerow_offspring.<a class="code" href="classmat_1_1_matrix_base.html#ac500eedd5e203327d3292f8ab22d8f3e">getNumRows</a>());</div><div class="line"><a name="l00263"></a><span class="lineno">  263</span>&#160;</div><div class="line"><a name="l00264"></a><span class="lineno">  264</span>&#160;  <span class="keywordflow">for</span> (<a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a> lidxinst_i = 0;</div><div class="line"><a name="l00265"></a><span class="lineno">  265</span>&#160;       aiiterator_instfirst != aiiterator_instlast;</div><div class="line"><a name="l00266"></a><span class="lineno">  266</span>&#160;       ++aiiterator_instfirst, lidxinst_i++)</div><div class="line"><a name="l00267"></a><span class="lineno">  267</span>&#160;    {</div><div class="line"><a name="l00268"></a><span class="lineno">  268</span>&#160;     </div><div class="line"><a name="l00269"></a><span class="lineno">  269</span>&#160;      T_CLUSTERIDX lIdxK_memberClusterPart1 =</div><div class="line"><a name="l00270"></a><span class="lineno">  270</span>&#160;        aipartition_chromPart1.<a class="code" href="classds_1_1_partition_linked_stats.html#acb60261685a91301a4d7a5c046375e31">getMemberShip</a>(lidxinst_i);</div><div class="line"><a name="l00271"></a><span class="lineno">  271</span>&#160;         </div><div class="line"><a name="l00272"></a><span class="lineno">  272</span>&#160;      T_CLUSTERIDX lIdxK_memberClusterPart2 =</div><div class="line"><a name="l00273"></a><span class="lineno">  273</span>&#160;        aipartition_chromPart2.<a class="code" href="classds_1_1_partition_linked_stats.html#acb60261685a91301a4d7a5c046375e31">getMemberShip</a>(lidxinst_i);</div><div class="line"><a name="l00274"></a><span class="lineno">  274</span>&#160;      </div><div class="line"><a name="l00275"></a><span class="lineno">  275</span>&#160;      <a class="code" href="classdata_1_1_instance_freq.html">data::InstanceFreq</a></div><div class="line"><a name="l00276"></a><span class="lineno">  276</span>&#160;        &lt;T_FEATURE,</div><div class="line"><a name="l00277"></a><span class="lineno">  277</span>&#160;         T_INSTANCE_FREQUENCY&gt; *literinstfo_iInstance  = </div><div class="line"><a name="l00278"></a><span class="lineno">  278</span>&#160;        (<a class="code" href="classdata_1_1_instance_freq.html">data::InstanceFreq&lt;T_FEATURE,T_INSTANCE_FREQUENCY&gt;</a>*)</div><div class="line"><a name="l00279"></a><span class="lineno">  279</span>&#160;        *aiiterator_instfirst;</div><div class="line"><a name="l00280"></a><span class="lineno">  280</span>&#160;         </div><div class="line"><a name="l00281"></a><span class="lineno">  281</span>&#160;      T_REAL lTnCentInst_distChrom1 = aifunc2p_dist</div><div class="line"><a name="l00282"></a><span class="lineno">  282</span>&#160;        (aiomatrixresizerow_chromPart1.<a class="code" href="classmat_1_1_matrix_resizable_row.html#a9dc9ad27ad33933bfa6c0f483e24cc33">getRow</a>(lIdxK_memberClusterPart1),</div><div class="line"><a name="l00283"></a><span class="lineno">  283</span>&#160;         literinstfo_iInstance-&gt;getFeatures(),</div><div class="line"><a name="l00284"></a><span class="lineno">  284</span>&#160;         literinstfo_iInstance-&gt;getNumDimensions()</div><div class="line"><a name="l00285"></a><span class="lineno">  285</span>&#160;         );</div><div class="line"><a name="l00286"></a><span class="lineno">  286</span>&#160;            </div><div class="line"><a name="l00287"></a><span class="lineno">  287</span>&#160;      T_REAL lTnCentInst_distChrom2 = </div><div class="line"><a name="l00288"></a><span class="lineno">  288</span>&#160;        aifunc2p_dist</div><div class="line"><a name="l00289"></a><span class="lineno">  289</span>&#160;        (aiomatrixresizerow_chromPart2.<a class="code" href="classmat_1_1_matrix_resizable_row.html#a9dc9ad27ad33933bfa6c0f483e24cc33">getRow</a>(lIdxK_memberClusterPart2),</div><div class="line"><a name="l00290"></a><span class="lineno">  290</span>&#160;         literinstfo_iInstance-&gt;getFeatures(),</div><div class="line"><a name="l00291"></a><span class="lineno">  291</span>&#160;         literinstfo_iInstance-&gt;getNumDimensions()</div><div class="line"><a name="l00292"></a><span class="lineno">  292</span>&#160;         );</div><div class="line"><a name="l00293"></a><span class="lineno">  293</span>&#160;         </div><div class="line"><a name="l00294"></a><span class="lineno">  294</span>&#160;      <span class="keywordflow">if</span>( lTnCentInst_distChrom2 &lt; lTnCentInst_distChrom1 )  {</div><div class="line"><a name="l00295"></a><span class="lineno">  295</span>&#160;        </div><div class="line"><a name="l00296"></a><span class="lineno">  296</span>&#160;        lpartlinkstats_offspring.changeMemberShip</div><div class="line"><a name="l00297"></a><span class="lineno">  297</span>&#160;          (aiomatrixresizerow_chromPart1.<a class="code" href="classmat_1_1_matrix_base.html#ac500eedd5e203327d3292f8ab22d8f3e">getNumRows</a>() + lIdxK_memberClusterPart2, </div><div class="line"><a name="l00298"></a><span class="lineno">  298</span>&#160;           lidxinst_i,</div><div class="line"><a name="l00299"></a><span class="lineno">  299</span>&#160;           literinstfo_iInstance-&gt;getFeatures(),</div><div class="line"><a name="l00300"></a><span class="lineno">  300</span>&#160;           literinstfo_iInstance-&gt;getFrequency()</div><div class="line"><a name="l00301"></a><span class="lineno">  301</span>&#160;           );</div><div class="line"><a name="l00302"></a><span class="lineno">  302</span>&#160;      }</div><div class="line"><a name="l00303"></a><span class="lineno">  303</span>&#160;    } </div><div class="line"><a name="l00304"></a><span class="lineno">  304</span>&#160;    </div><div class="line"><a name="l00305"></a><span class="lineno">  305</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l00306"></a><span class="lineno">  306</span>&#160;  <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l00307"></a><span class="lineno">  307</span>&#160;    std::cout &lt;&lt; lpc_labelFunc</div><div class="line"><a name="l00308"></a><span class="lineno">  308</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;: OUT(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="stringliteral">&quot;)\n&quot;</span>;</div><div class="line"><a name="l00309"></a><span class="lineno">  309</span>&#160;    aiochromcbga_offspring.print(std::cout,lpc_labelFunc,<span class="charliteral">&#39;,&#39;</span>,<span class="charliteral">&#39;;&#39;</span>);</div><div class="line"><a name="l00310"></a><span class="lineno">  310</span>&#160;    std::cout &lt;&lt; std::endl;</div><div class="line"><a name="l00311"></a><span class="lineno">  311</span>&#160;  }</div><div class="line"><a name="l00312"></a><span class="lineno">  312</span>&#160;  --geiinparam_verbose;</div><div class="line"><a name="l00313"></a><span class="lineno">  313</span>&#160;<span class="preprocessor">#endif //__VERBOSE_YES</span></div><div class="line"><a name="l00314"></a><span class="lineno">  314</span>&#160;</div><div class="line"><a name="l00315"></a><span class="lineno">  315</span>&#160;} <span class="comment">/*END merge*/</span></div><div class="line"><a name="l00316"></a><span class="lineno">  316</span>&#160;  </div><div class="line"><a name="l00317"></a><span class="lineno">  317</span>&#160;</div><div class="line"><a name="l00329"></a><span class="lineno">  329</span>&#160;<span class="keyword">template</span> &lt;<span class="keyword">typename</span> T_FEATURE,</div><div class="line"><a name="l00330"></a><span class="lineno">  330</span>&#160;          <span class="keyword">typename</span> T_INSTANCE_FREQUENCY,</div><div class="line"><a name="l00331"></a><span class="lineno">  331</span>&#160;          <span class="keyword">typename</span> T_INSTANCES_CLUSTER_K,  <span class="comment">//0, 1, .., N</span></div><div class="line"><a name="l00332"></a><span class="lineno">  332</span>&#160;          <span class="keyword">typename</span> T_FEATURE_SUM,</div><div class="line"><a name="l00333"></a><span class="lineno">  333</span>&#160;          <span class="keyword">typename</span> T_CLUSTERIDX, <span class="comment">//-1, 0, 1, .., K</span></div><div class="line"><a name="l00334"></a><span class="lineno">  334</span>&#160;          <span class="keyword">typename</span> T_REAL,</div><div class="line"><a name="l00335"></a><span class="lineno">  335</span>&#160;          <span class="keyword">typename</span> INPUT_ITERATOR</div><div class="line"><a name="l00336"></a><span class="lineno">  336</span>&#160;          &gt;</div><div class="line"><a name="l00337"></a><span class="lineno">  337</span>&#160;<span class="keywordtype">void</span></div><div class="line"><a name="l00338"></a><span class="lineno">  338</span>&#160;<a class="code" href="namespacegaclusteringop.html#a08e44d7c579743d81b7f23d0c09e4414">crossPNNnew</a></div><div class="line"><a name="l00339"></a><span class="lineno"><a class="line" href="namespacegaclusteringop.html#a08e44d7c579743d81b7f23d0c09e4414">  339</a></span>&#160;(<a class="code" href="classgaencode_1_1_chromosome_c_b_g_a.html">gaencode::ChromosomeCBGA</a></div><div class="line"><a name="l00340"></a><span class="lineno">  340</span>&#160; &lt;T_FEATURE,</div><div class="line"><a name="l00341"></a><span class="lineno">  341</span>&#160; T_CLUSTERIDX,</div><div class="line"><a name="l00342"></a><span class="lineno">  342</span>&#160; T_INSTANCE_FREQUENCY,</div><div class="line"><a name="l00343"></a><span class="lineno">  343</span>&#160; T_INSTANCES_CLUSTER_K,</div><div class="line"><a name="l00344"></a><span class="lineno">  344</span>&#160; T_FEATURE_SUM, </div><div class="line"><a name="l00345"></a><span class="lineno">  345</span>&#160; T_REAL&gt;                            &amp;aochromcbga_new,</div><div class="line"><a name="l00346"></a><span class="lineno">  346</span>&#160; <a class="code" href="classgaencode_1_1_chromosome_c_b_g_a.html">gaencode::ChromosomeCBGA</a></div><div class="line"><a name="l00347"></a><span class="lineno">  347</span>&#160; &lt;T_FEATURE,</div><div class="line"><a name="l00348"></a><span class="lineno">  348</span>&#160; T_CLUSTERIDX,</div><div class="line"><a name="l00349"></a><span class="lineno">  349</span>&#160; T_INSTANCE_FREQUENCY,</div><div class="line"><a name="l00350"></a><span class="lineno">  350</span>&#160; T_INSTANCES_CLUSTER_K,</div><div class="line"><a name="l00351"></a><span class="lineno">  351</span>&#160; T_FEATURE_SUM,</div><div class="line"><a name="l00352"></a><span class="lineno">  352</span>&#160; T_REAL&gt;                            &amp;aichromcbga_old1,</div><div class="line"><a name="l00353"></a><span class="lineno">  353</span>&#160; <a class="code" href="classgaencode_1_1_chromosome_c_b_g_a.html">gaencode::ChromosomeCBGA</a></div><div class="line"><a name="l00354"></a><span class="lineno">  354</span>&#160; &lt;T_FEATURE,</div><div class="line"><a name="l00355"></a><span class="lineno">  355</span>&#160; T_CLUSTERIDX,</div><div class="line"><a name="l00356"></a><span class="lineno">  356</span>&#160; T_INSTANCE_FREQUENCY,</div><div class="line"><a name="l00357"></a><span class="lineno">  357</span>&#160; T_INSTANCES_CLUSTER_K,</div><div class="line"><a name="l00358"></a><span class="lineno">  358</span>&#160; T_FEATURE_SUM, </div><div class="line"><a name="l00359"></a><span class="lineno">  359</span>&#160; T_REAL&gt;                            &amp;aichromcbga_old2,</div><div class="line"><a name="l00360"></a><span class="lineno">  360</span>&#160; INPUT_ITERATOR                     aiiterator_instfirst,</div><div class="line"><a name="l00361"></a><span class="lineno">  361</span>&#160; <span class="keyword">const</span> INPUT_ITERATOR               aiiterator_instlast,</div><div class="line"><a name="l00362"></a><span class="lineno">  362</span>&#160; <span class="keyword">const</span> T_CLUSTERIDX                 aicidx_numclusterKToReduce,</div><div class="line"><a name="l00363"></a><span class="lineno">  363</span>&#160; <span class="keyword">const</span> <a class="code" href="structdist_1_1_dist.html">dist::Dist&lt;T_REAL,T_FEATURE&gt;</a> &amp;aifunc2p_dist</div><div class="line"><a name="l00364"></a><span class="lineno">  364</span>&#160; )</div><div class="line"><a name="l00365"></a><span class="lineno">  365</span>&#160;{</div><div class="line"><a name="l00366"></a><span class="lineno">  366</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l00367"></a><span class="lineno">  367</span>&#160;  ++geiinparam_verbose;</div><div class="line"><a name="l00368"></a><span class="lineno">  368</span>&#160;  <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l00369"></a><span class="lineno">  369</span>&#160;    std::cout &lt;&lt; <span class="stringliteral">&quot;gaclusteringop::crossPNNnew:  IN&quot;</span></div><div class="line"><a name="l00370"></a><span class="lineno">  370</span>&#160;              &lt;&lt; <span class="charliteral">&#39;(&#39;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="stringliteral">&quot;)\n&quot;</span></div><div class="line"><a name="l00371"></a><span class="lineno">  371</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;\t(output gaencode::ChromosomeCBGA: aochromcbga_new[&quot;</span></div><div class="line"><a name="l00372"></a><span class="lineno">  372</span>&#160;              &lt;&lt; &amp;aochromcbga_new &lt;&lt; <span class="stringliteral">&quot;]\n&quot;</span></div><div class="line"><a name="l00373"></a><span class="lineno">  373</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;\t input  gaencode::ChromosomeCBGA: aichromcbga_old1[&quot;</span></div><div class="line"><a name="l00374"></a><span class="lineno">  374</span>&#160;              &lt;&lt; &amp;aichromcbga_old1 &lt;&lt; <span class="stringliteral">&quot;]\n&quot;</span></div><div class="line"><a name="l00375"></a><span class="lineno">  375</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;\t input  gaencode::ChromosomeCBGA: aichromcbga_old2[&quot;</span></div><div class="line"><a name="l00376"></a><span class="lineno">  376</span>&#160;              &lt;&lt; &amp;aichromcbga_old2 &lt;&lt; <span class="stringliteral">&quot;]\n&quot;</span></div><div class="line"><a name="l00377"></a><span class="lineno">  377</span>&#160;              &lt;&lt; <span class="stringliteral">&quot; input  aiiterator_instfirst[&quot;</span> &lt;&lt; *aiiterator_instfirst &lt;&lt; <span class="stringliteral">&quot;]\n&quot;</span></div><div class="line"><a name="l00378"></a><span class="lineno">  378</span>&#160;              &lt;&lt; <span class="stringliteral">&quot; input const aiiterator_instlast[&quot;</span> &lt;&lt; &amp;aiiterator_instlast &lt;&lt; <span class="stringliteral">&quot;]\n&quot;</span></div><div class="line"><a name="l00379"></a><span class="lineno">  379</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;\t input  T_CLUSTERIDX:     aicidx_numclusterKToReduce &quot;</span> </div><div class="line"><a name="l00380"></a><span class="lineno">  380</span>&#160;              &lt;&lt; aicidx_numclusterKToReduce &lt;&lt; <span class="charliteral">&#39;\n&#39;</span></div><div class="line"><a name="l00381"></a><span class="lineno">  381</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;\t input  dist::Dist&lt;T_REAL,T_FEATURE&gt; &amp;aifunc2p_dist[&quot;</span> </div><div class="line"><a name="l00382"></a><span class="lineno">  382</span>&#160;              &lt;&lt; &amp;aifunc2p_dist &lt;&lt; <span class="stringliteral">&quot;]\n&quot;</span></div><div class="line"><a name="l00383"></a><span class="lineno">  383</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;\t)&quot;</span></div><div class="line"><a name="l00384"></a><span class="lineno">  384</span>&#160;              &lt;&lt; std::endl;</div><div class="line"><a name="l00385"></a><span class="lineno">  385</span>&#160;  }</div><div class="line"><a name="l00386"></a><span class="lineno">  386</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l00387"></a><span class="lineno">  387</span>&#160;</div><div class="line"><a name="l00388"></a><span class="lineno">  388</span>&#160;  <span class="comment">/* Combine chromosomes: </span></div><div class="line"><a name="l00389"></a><span class="lineno">  389</span>&#160;<span class="comment">         aochromcbga_new &lt;-- aichromcbga_old1 + aichromcbga_old2, </span></div><div class="line"><a name="l00390"></a><span class="lineno">  390</span>&#160;<span class="comment">   */</span></div><div class="line"><a name="l00391"></a><span class="lineno">  391</span>&#160;  <a class="code" href="namespacegaclusteringop.html#a3ecbd55894b1ddbc7bf49a22df7cde00">merge</a></div><div class="line"><a name="l00392"></a><span class="lineno">  392</span>&#160;    (aochromcbga_new,</div><div class="line"><a name="l00393"></a><span class="lineno">  393</span>&#160;     aichromcbga_old1,</div><div class="line"><a name="l00394"></a><span class="lineno">  394</span>&#160;     aichromcbga_old2,</div><div class="line"><a name="l00395"></a><span class="lineno">  395</span>&#160;     aiiterator_instfirst,</div><div class="line"><a name="l00396"></a><span class="lineno">  396</span>&#160;     aiiterator_instlast,</div><div class="line"><a name="l00397"></a><span class="lineno">  397</span>&#160;     aifunc2p_dist</div><div class="line"><a name="l00398"></a><span class="lineno">  398</span>&#160;     );</div><div class="line"><a name="l00399"></a><span class="lineno">  399</span>&#160;</div><div class="line"><a name="l00400"></a><span class="lineno">  400</span>&#160;  <span class="comment">/* Calculate optimal centroids (2K) for combined partitioning (mean) </span></div><div class="line"><a name="l00401"></a><span class="lineno">  401</span>&#160;<span class="comment">   */</span></div><div class="line"><a name="l00402"></a><span class="lineno">  402</span>&#160;  aochromcbga_new.optimalCodebook(); </div><div class="line"><a name="l00403"></a><span class="lineno">  403</span>&#160;  </div><div class="line"><a name="l00404"></a><span class="lineno">  404</span>&#160;  <span class="comment">/* Reduce clustering size from 2K -&gt; K using PNN algorithm </span></div><div class="line"><a name="l00405"></a><span class="lineno">  405</span>&#160;<span class="comment">   */</span></div><div class="line"><a name="l00406"></a><span class="lineno">  406</span>&#160;  <a class="code" href="namespaceclusteringop.html#a8dda4c828d8ffde2aff08eb40dc35190">clusteringop::pnnFast</a></div><div class="line"><a name="l00407"></a><span class="lineno">  407</span>&#160;    (aochromcbga_new.getPartition(),</div><div class="line"><a name="l00408"></a><span class="lineno">  408</span>&#160;     aochromcbga_new.getCodeBook(),</div><div class="line"><a name="l00409"></a><span class="lineno">  409</span>&#160;     aiiterator_instfirst,</div><div class="line"><a name="l00410"></a><span class="lineno">  410</span>&#160;     aiiterator_instlast,</div><div class="line"><a name="l00411"></a><span class="lineno">  411</span>&#160;     aicidx_numclusterKToReduce,</div><div class="line"><a name="l00412"></a><span class="lineno">  412</span>&#160;     aifunc2p_dist</div><div class="line"><a name="l00413"></a><span class="lineno">  413</span>&#160;     );</div><div class="line"><a name="l00414"></a><span class="lineno">  414</span>&#160;  </div><div class="line"><a name="l00415"></a><span class="lineno">  415</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l00416"></a><span class="lineno">  416</span>&#160;  <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l00417"></a><span class="lineno">  417</span>&#160;    std::cout &lt;&lt; <span class="stringliteral">&quot;gaclusteringop::crossPNNnew: OUT&quot;</span></div><div class="line"><a name="l00418"></a><span class="lineno">  418</span>&#160;              &lt;&lt; <span class="charliteral">&#39;(&#39;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="stringliteral">&quot;)\n&quot;</span>;</div><div class="line"><a name="l00419"></a><span class="lineno">  419</span>&#160;  }</div><div class="line"><a name="l00420"></a><span class="lineno">  420</span>&#160;  --geiinparam_verbose;</div><div class="line"><a name="l00421"></a><span class="lineno">  421</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l00422"></a><span class="lineno">  422</span>&#160;</div><div class="line"><a name="l00423"></a><span class="lineno">  423</span>&#160;} <span class="comment">/*END crossPNNnew*/</span></div><div class="line"><a name="l00424"></a><span class="lineno">  424</span>&#160;</div><div class="line"><a name="l00425"></a><span class="lineno">  425</span>&#160;</div><div class="line"><a name="l00426"></a><span class="lineno">  426</span>&#160;</div><div class="line"><a name="l00448"></a><span class="lineno">  448</span>&#160;<span class="keyword">template</span> &lt;<span class="keyword">typename</span> T_GENE,</div><div class="line"><a name="l00449"></a><span class="lineno">  449</span>&#160;           <span class="keyword">typename</span> T_METRIC</div><div class="line"><a name="l00450"></a><span class="lineno">  450</span>&#160;           &gt;</div><div class="line"><a name="l00451"></a><span class="lineno">  451</span>&#160;<span class="keyword">inline</span></div><div class="line"><a name="l00452"></a><span class="lineno">  452</span>&#160;<span class="keywordtype">void</span></div><div class="line"><a name="l00453"></a><span class="lineno">  453</span>&#160;<a class="code" href="namespacegaclusteringop.html#a50fa9f176df103b249d767838b5a044c">onePointCrossover</a></div><div class="line"><a name="l00454"></a><span class="lineno"><a class="line" href="namespacegaclusteringop.html#a50fa9f176df103b249d767838b5a044c">  454</a></span>&#160;(<a class="code" href="classgaencode_1_1_chromosome_matrix_with_row_null.html">gaencode::ChromosomeMatrixWithRowNull&lt;T_GENE,T_METRIC&gt;</a> &amp;aiochrommwrn_child1,</div><div class="line"><a name="l00455"></a><span class="lineno">  455</span>&#160; <a class="code" href="classgaencode_1_1_chromosome_matrix_with_row_null.html">gaencode::ChromosomeMatrixWithRowNull&lt;T_GENE,T_METRIC&gt;</a> &amp;aiochrommwrn_child2</div><div class="line"><a name="l00456"></a><span class="lineno">  456</span>&#160; )</div><div class="line"><a name="l00457"></a><span class="lineno">  457</span>&#160;{</div><div class="line"><a name="l00458"></a><span class="lineno">  458</span>&#160; <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a> lui_minStringLength =</div><div class="line"><a name="l00459"></a><span class="lineno">  459</span>&#160;    std::min(aiochrommwrn_child1.<a class="code" href="classmat_1_1_matrix_with_row_null.html#a8d77f1703911ef50ec18d351e7bf17da">getNumRowsMax</a>(),aiochrommwrn_child1.<a class="code" href="classmat_1_1_matrix_with_row_null.html#a8d77f1703911ef50ec18d351e7bf17da">getNumRowsMax</a>());</div><div class="line"><a name="l00460"></a><span class="lineno">  460</span>&#160; std::uniform_int_distribution&lt;uintidx&gt; luniformdis_uiCrossover1KMax</div><div class="line"><a name="l00461"></a><span class="lineno">  461</span>&#160;   (1,lui_minStringLength-1);</div><div class="line"><a name="l00462"></a><span class="lineno">  462</span>&#160; <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a> lui_positionGene = luniformdis_uiCrossover1KMax(<a class="code" href="ga__clustering__operator_8hpp.html#acee5944d570f2fb7efdf1d4c801b30fb">gmt19937_eng</a>);</div><div class="line"><a name="l00463"></a><span class="lineno">  463</span>&#160; </div><div class="line"><a name="l00464"></a><span class="lineno">  464</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l00465"></a><span class="lineno">  465</span>&#160;  <span class="keyword">const</span> <span class="keywordtype">char</span>* lpc_labelFunc = <span class="stringliteral">&quot;gaclusteringop::onePointCrossover&quot;</span>;</div><div class="line"><a name="l00466"></a><span class="lineno">  466</span>&#160;  ++geiinparam_verbose;</div><div class="line"><a name="l00467"></a><span class="lineno">  467</span>&#160;  <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l00468"></a><span class="lineno">  468</span>&#160;    std::cout &lt;&lt; lpc_labelFunc </div><div class="line"><a name="l00469"></a><span class="lineno">  469</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;:  IN(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="charliteral">&#39;)&#39;</span></div><div class="line"><a name="l00470"></a><span class="lineno">  470</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;\n(output gaencode::Chromosomemat::MatrixWithRowNull&lt;&gt;&amp;: aiochrommwrn_child1[&quot;</span> </div><div class="line"><a name="l00471"></a><span class="lineno">  471</span>&#160;              &lt;&lt; &amp;aiochrommwrn_child1 &lt;&lt; <span class="stringliteral">&quot;]\n&quot;</span></div><div class="line"><a name="l00472"></a><span class="lineno">  472</span>&#160;              &lt;&lt; <span class="stringliteral">&quot; output gaencode::Chromosomemat::MatrixWithRowNull&lt;&gt;&amp;: aiochrommwrn_child2[&quot;</span> </div><div class="line"><a name="l00473"></a><span class="lineno">  473</span>&#160;              &lt;&lt; &amp;aiochrommwrn_child2 &lt;&lt; <span class="stringliteral">&quot;]\n&quot;</span></div><div class="line"><a name="l00474"></a><span class="lineno">  474</span>&#160;              &lt;&lt; <span class="stringliteral">&quot; lui_positionGene =  &quot;</span> &lt;&lt; lui_positionGene</div><div class="line"><a name="l00475"></a><span class="lineno">  475</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;\n)&quot;</span></div><div class="line"><a name="l00476"></a><span class="lineno">  476</span>&#160;              &lt;&lt; std::endl;</div><div class="line"><a name="l00477"></a><span class="lineno">  477</span>&#160;  }</div><div class="line"><a name="l00478"></a><span class="lineno">  478</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l00479"></a><span class="lineno">  479</span>&#160;</div><div class="line"><a name="l00480"></a><span class="lineno">  480</span>&#160;  <span class="keywordflow">if</span> ( lui_minStringLength  == aiochrommwrn_child1.<a class="code" href="classmat_1_1_matrix_with_row_null.html#a8d77f1703911ef50ec18d351e7bf17da">getNumRowsMax</a>() ) {</div><div class="line"><a name="l00481"></a><span class="lineno">  481</span>&#160;    aiochrommwrn_child1.<a class="code" href="classmat_1_1_matrix_with_row_null.html#aee081e65142220cb024d5b5ee5e18b40">combination</a>(lui_positionGene,aiochrommwrn_child2);</div><div class="line"><a name="l00482"></a><span class="lineno">  482</span>&#160;  }</div><div class="line"><a name="l00483"></a><span class="lineno">  483</span>&#160;  <span class="keywordflow">else</span> {</div><div class="line"><a name="l00484"></a><span class="lineno">  484</span>&#160;    aiochrommwrn_child2.<a class="code" href="classmat_1_1_matrix_with_row_null.html#aee081e65142220cb024d5b5ee5e18b40">combination</a>(lui_positionGene,aiochrommwrn_child1);</div><div class="line"><a name="l00485"></a><span class="lineno">  485</span>&#160;  }</div><div class="line"><a name="l00486"></a><span class="lineno">  486</span>&#160;  </div><div class="line"><a name="l00487"></a><span class="lineno">  487</span>&#160;  aiochrommwrn_child1.<a class="code" href="classgaencode_1_1_chromosome_base.html#ab136d6f70ea068097d764e5bc34015e1">setFitness</a>(-std::numeric_limits&lt;T_METRIC&gt;::max());  </div><div class="line"><a name="l00488"></a><span class="lineno">  488</span>&#160;  aiochrommwrn_child1.<a class="code" href="classgaencode_1_1_chromosome_base.html#a0c0f339b486fb7d097d2afac2539ddc8">setObjetiveFunc</a>(std::numeric_limits&lt;T_METRIC&gt;::max());</div><div class="line"><a name="l00489"></a><span class="lineno">  489</span>&#160;  aiochrommwrn_child2.<a class="code" href="classgaencode_1_1_chromosome_base.html#ab136d6f70ea068097d764e5bc34015e1">setFitness</a>(-std::numeric_limits&lt;T_METRIC&gt;::max());  </div><div class="line"><a name="l00490"></a><span class="lineno">  490</span>&#160;  aiochrommwrn_child2.<a class="code" href="classgaencode_1_1_chromosome_base.html#a0c0f339b486fb7d097d2afac2539ddc8">setObjetiveFunc</a>(std::numeric_limits&lt;T_METRIC&gt;::max());</div><div class="line"><a name="l00491"></a><span class="lineno">  491</span>&#160;</div><div class="line"><a name="l00492"></a><span class="lineno">  492</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l00493"></a><span class="lineno">  493</span>&#160;  <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l00494"></a><span class="lineno">  494</span>&#160;    std::cout &lt;&lt; lpc_labelFunc</div><div class="line"><a name="l00495"></a><span class="lineno">  495</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;: OUT(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="stringliteral">&quot;)\n&quot;</span>;</div><div class="line"><a name="l00496"></a><span class="lineno">  496</span>&#160;    aiochrommwrn_child1.<a class="code" href="classgaencode_1_1_chromosome_matrix_with_row_null.html#a6ebc3be8731fb39e14355b05b89767e1">print</a>(std::cout,lpc_labelFunc,<span class="charliteral">&#39;,&#39;</span>,<span class="charliteral">&#39;;&#39;</span>);</div><div class="line"><a name="l00497"></a><span class="lineno">  497</span>&#160;    std::cout &lt;&lt; <span class="charliteral">&#39;\n&#39;</span>;</div><div class="line"><a name="l00498"></a><span class="lineno">  498</span>&#160;    aiochrommwrn_child2.<a class="code" href="classgaencode_1_1_chromosome_matrix_with_row_null.html#a6ebc3be8731fb39e14355b05b89767e1">print</a>(std::cout,lpc_labelFunc,<span class="charliteral">&#39;,&#39;</span>,<span class="charliteral">&#39;;&#39;</span>);</div><div class="line"><a name="l00499"></a><span class="lineno">  499</span>&#160;    std::cout &lt;&lt; std::endl;</div><div class="line"><a name="l00500"></a><span class="lineno">  500</span>&#160;  }</div><div class="line"><a name="l00501"></a><span class="lineno">  501</span>&#160;  --geiinparam_verbose;</div><div class="line"><a name="l00502"></a><span class="lineno">  502</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l00503"></a><span class="lineno">  503</span>&#160;</div><div class="line"><a name="l00504"></a><span class="lineno">  504</span>&#160;}</div><div class="line"><a name="l00505"></a><span class="lineno">  505</span>&#160;</div><div class="line"><a name="l00506"></a><span class="lineno">  506</span>&#160;</div><div class="line"><a name="l00513"></a><span class="lineno">  513</span>&#160;<span class="keyword">template</span> &lt;<span class="keyword">typename</span> T_CLUSTERIDX,</div><div class="line"><a name="l00514"></a><span class="lineno">  514</span>&#160;           <span class="keyword">typename</span> T_METRIC</div><div class="line"><a name="l00515"></a><span class="lineno">  515</span>&#160;           &gt;</div><div class="line"><a name="l00516"></a><span class="lineno">  516</span>&#160;<a class="code" href="classgaencode_1_1_chromosome_g_g_a.html">gaencode::ChromosomeGGA&lt;T_CLUSTERIDX,T_METRIC&gt;</a></div><div class="line"><a name="l00517"></a><span class="lineno">  517</span>&#160;<a class="code" href="namespacegaclusteringop.html#abc19797156931b073030d9a58175d0c9">mergeCrossover</a></div><div class="line"><a name="l00518"></a><span class="lineno"><a class="line" href="namespacegaclusteringop.html#abc19797156931b073030d9a58175d0c9">  518</a></span>&#160;(<a class="code" href="classgaencode_1_1_chromosome_g_g_a.html">gaencode::ChromosomeGGA&lt;T_CLUSTERIDX,T_METRIC&gt;</a>&amp; aichrom_parent1, </div><div class="line"><a name="l00519"></a><span class="lineno">  519</span>&#160; <a class="code" href="classgaencode_1_1_chromosome_g_g_a.html">gaencode::ChromosomeGGA&lt;T_CLUSTERIDX,T_METRIC&gt;</a>&amp; aichrom_parent2</div><div class="line"><a name="l00520"></a><span class="lineno">  520</span>&#160; )</div><div class="line"><a name="l00521"></a><span class="lineno">  521</span>&#160;{</div><div class="line"><a name="l00522"></a><span class="lineno">  522</span>&#160;  T_CLUSTERIDX lcidx_kParent1 = aichrom_parent1.<a class="code" href="classgaencode_1_1_chromosome_g_g_a.html#aad4d008731eebf9615ad62aa884cc518">getNumClusterK</a>();</div><div class="line"><a name="l00523"></a><span class="lineno">  523</span>&#160;  T_CLUSTERIDX lcidx_kParent2 = aichrom_parent2.<a class="code" href="classgaencode_1_1_chromosome_g_g_a.html#aad4d008731eebf9615ad62aa884cc518">getNumClusterK</a>();</div><div class="line"><a name="l00524"></a><span class="lineno">  524</span>&#160;  </div><div class="line"><a name="l00525"></a><span class="lineno">  525</span>&#160;  std::uniform_int_distribution&lt;T_CLUSTERIDX&gt; uniformdis_cidx_KParent1</div><div class="line"><a name="l00526"></a><span class="lineno">  526</span>&#160;    (0,lcidx_kParent1-1);</div><div class="line"><a name="l00527"></a><span class="lineno">  527</span>&#160;  std::uniform_int_distribution&lt;T_CLUSTERIDX&gt; uniformdis_cidx_KParent2</div><div class="line"><a name="l00528"></a><span class="lineno">  528</span>&#160;    (0,lcidx_kParent2-1);</div><div class="line"><a name="l00529"></a><span class="lineno">  529</span>&#160;  </div><div class="line"><a name="l00530"></a><span class="lineno">  530</span>&#160;  <span class="keyword">auto</span> lpaircidx_parent1 = </div><div class="line"><a name="l00531"></a><span class="lineno">  531</span>&#160;    <a class="code" href="namespaceprob.html#a736bde3100258c3c2d13ebfe2b6746f8">prob::getRandPairUnlikeInOrd</a></div><div class="line"><a name="l00532"></a><span class="lineno">  532</span>&#160;    ([&amp;]() -&gt; T_CLUSTERIDX</div><div class="line"><a name="l00533"></a><span class="lineno">  533</span>&#160;     {</div><div class="line"><a name="l00534"></a><span class="lineno">  534</span>&#160;       <span class="keywordflow">return</span> uniformdis_cidx_KParent1(<a class="code" href="ga__clustering__operator_8hpp.html#acee5944d570f2fb7efdf1d4c801b30fb">gmt19937_eng</a>);</div><div class="line"><a name="l00535"></a><span class="lineno">  535</span>&#160;     }</div><div class="line"><a name="l00536"></a><span class="lineno">  536</span>&#160;     );</div><div class="line"><a name="l00537"></a><span class="lineno">  537</span>&#160;  <span class="keyword">auto</span> lpaircidx_parent2 = </div><div class="line"><a name="l00538"></a><span class="lineno">  538</span>&#160;    <a class="code" href="namespaceprob.html#a736bde3100258c3c2d13ebfe2b6746f8">prob::getRandPairUnlikeInOrd</a></div><div class="line"><a name="l00539"></a><span class="lineno">  539</span>&#160;    ([&amp;]() -&gt; T_CLUSTERIDX</div><div class="line"><a name="l00540"></a><span class="lineno">  540</span>&#160;     {</div><div class="line"><a name="l00541"></a><span class="lineno">  541</span>&#160;       <span class="keywordflow">return</span> uniformdis_cidx_KParent2(<a class="code" href="ga__clustering__operator_8hpp.html#acee5944d570f2fb7efdf1d4c801b30fb">gmt19937_eng</a>);</div><div class="line"><a name="l00542"></a><span class="lineno">  542</span>&#160;     }</div><div class="line"><a name="l00543"></a><span class="lineno">  543</span>&#160;     );</div><div class="line"><a name="l00544"></a><span class="lineno">  544</span>&#160;    </div><div class="line"><a name="l00545"></a><span class="lineno">  545</span>&#160;   </div><div class="line"><a name="l00546"></a><span class="lineno">  546</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l00547"></a><span class="lineno">  547</span>&#160;  <span class="keyword">const</span> <span class="keywordtype">char</span>* lpc_labelFunc = <span class="stringliteral">&quot;gaclusteringop::mergeCrossover&quot;</span>;</div><div class="line"><a name="l00548"></a><span class="lineno">  548</span>&#160;  ++geiinparam_verbose;</div><div class="line"><a name="l00549"></a><span class="lineno">  549</span>&#160;  <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l00550"></a><span class="lineno">  550</span>&#160;    std::cout &lt;&lt; lpc_labelFunc</div><div class="line"><a name="l00551"></a><span class="lineno">  551</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;:  IN(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="stringliteral">&quot;)\n&quot;</span>;</div><div class="line"><a name="l00552"></a><span class="lineno">  552</span>&#160;    std::ostringstream lostrstream_labelChromParent1;</div><div class="line"><a name="l00553"></a><span class="lineno">  553</span>&#160;    lostrstream_labelChromParent1 &lt;&lt; <span class="stringliteral">&quot;PARENT1:&quot;</span></div><div class="line"><a name="l00554"></a><span class="lineno">  554</span>&#160;                                  &lt;&lt; lpc_labelFunc;</div><div class="line"><a name="l00555"></a><span class="lineno">  555</span>&#160;    aichrom_parent1.<a class="code" href="classgaencode_1_1_chromosome_g_g_a.html#a1b069cf9c5179f7aff064081f72aefb6">print</a>(std::cout,lostrstream_labelChromParent1.str().c_str());</div><div class="line"><a name="l00556"></a><span class="lineno">  556</span>&#160;    std::cout &lt;&lt; <span class="charliteral">&#39;\n&#39;</span>;</div><div class="line"><a name="l00557"></a><span class="lineno">  557</span>&#160;    std::ostringstream lostrstream_labelChromParent2;</div><div class="line"><a name="l00558"></a><span class="lineno">  558</span>&#160;    lostrstream_labelChromParent2 &lt;&lt; <span class="stringliteral">&quot;PARENT2:&quot;</span></div><div class="line"><a name="l00559"></a><span class="lineno">  559</span>&#160;                                  &lt;&lt; lpc_labelFunc;</div><div class="line"><a name="l00560"></a><span class="lineno">  560</span>&#160;    aichrom_parent2.<a class="code" href="classgaencode_1_1_chromosome_g_g_a.html#a1b069cf9c5179f7aff064081f72aefb6">print</a>(std::cout,lostrstream_labelChromParent2.str().c_str());</div><div class="line"><a name="l00561"></a><span class="lineno">  561</span>&#160;    std::cout &lt;&lt; <span class="charliteral">&#39;\n&#39;</span>;</div><div class="line"><a name="l00562"></a><span class="lineno">  562</span>&#160;</div><div class="line"><a name="l00563"></a><span class="lineno">  563</span>&#160;    std::cout &lt;&lt; <span class="stringliteral">&quot;lcidx_kParent1 = &quot;</span>  &lt;&lt; lcidx_kParent1</div><div class="line"><a name="l00564"></a><span class="lineno">  564</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;,LimRandom[&quot;</span> &lt;&lt; lpaircidx_parent1.first &lt;&lt; <span class="charliteral">&#39;,&#39;</span> &lt;&lt; lpaircidx_parent1.second &lt;&lt; <span class="charliteral">&#39;]&#39;</span></div><div class="line"><a name="l00565"></a><span class="lineno">  565</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;,lcidx_kParent2 = &quot;</span> &lt;&lt; lcidx_kParent2</div><div class="line"><a name="l00566"></a><span class="lineno">  566</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;,LimRandom[&quot;</span> &lt;&lt; lpaircidx_parent2.first &lt;&lt; <span class="charliteral">&#39;,&#39;</span> &lt;&lt; lpaircidx_parent2.second &lt;&lt; <span class="charliteral">&#39;]&#39;</span></div><div class="line"><a name="l00567"></a><span class="lineno">  567</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;,lui_lengthElemSec = &quot;</span></div><div class="line"><a name="l00568"></a><span class="lineno">  568</span>&#160;              &lt;&lt; <a class="code" href="classgaencode_1_1_chromosome_g_g_a.html#acf107792536ef822d20bed243aa89160">gaencode::ChromosomeGGA&lt;T_CLUSTERIDX,T_METRIC&gt;::getElementSize</a>()</div><div class="line"><a name="l00569"></a><span class="lineno">  569</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;\n)&quot;</span></div><div class="line"><a name="l00570"></a><span class="lineno">  570</span>&#160;              &lt;&lt; std::endl;</div><div class="line"><a name="l00571"></a><span class="lineno">  571</span>&#160;  }</div><div class="line"><a name="l00572"></a><span class="lineno">  572</span>&#160;<span class="preprocessor">#endif //__VERBOSE_YES</span></div><div class="line"><a name="l00573"></a><span class="lineno">  573</span>&#160;</div><div class="line"><a name="l00574"></a><span class="lineno">  574</span>&#160; <span class="keyword">const</span> T_CLUSTERIDX lcidx_kOffspring = </div><div class="line"><a name="l00575"></a><span class="lineno">  575</span>&#160;    lpaircidx_parent1.second - lpaircidx_parent1.first + lpaircidx_parent2.second - lpaircidx_parent2.first + 2;</div><div class="line"><a name="l00576"></a><span class="lineno">  576</span>&#160;</div><div class="line"><a name="l00577"></a><span class="lineno">  577</span>&#160; std::uniform_int_distribution&lt;T_CLUSTERIDX&gt; uniformdis_cidx_KOffspring</div><div class="line"><a name="l00578"></a><span class="lineno">  578</span>&#160;    (0,lcidx_kOffspring-1);</div><div class="line"><a name="l00579"></a><span class="lineno">  579</span>&#160; </div><div class="line"><a name="l00580"></a><span class="lineno">  580</span>&#160;  <a class="code" href="classgaencode_1_1_chromosome_g_g_a.html">gaencode::ChromosomeGGA&lt;T_CLUSTERIDX,T_METRIC&gt;</a> lochrom_offspring((<a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>) lcidx_kOffspring );</div><div class="line"><a name="l00581"></a><span class="lineno">  581</span>&#160;  std::vector&lt;uintidx&gt; lvectort_numInstClusterK((<a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>) lcidx_kOffspring, 0);</div><div class="line"><a name="l00582"></a><span class="lineno">  582</span>&#160;</div><div class="line"><a name="l00583"></a><span class="lineno">  583</span>&#160;  lochrom_offspring.<a class="code" href="classgaencode_1_1_chromosome_g_g_a.html#aa8e83da69a7ab90e13da04fe9500103a">initializeGroupSec</a>();</div><div class="line"><a name="l00584"></a><span class="lineno">  584</span>&#160;</div><div class="line"><a name="l00585"></a><span class="lineno">  585</span>&#160;  <span class="comment">//INITIALIZE</span></div><div class="line"><a name="l00586"></a><span class="lineno">  586</span>&#160;  <a class="code" href="namespaceinterfacesse.html#aa4b94bf2bf8cb7c437fa3feba8b70ff8">interfacesse::copya</a></div><div class="line"><a name="l00587"></a><span class="lineno">  587</span>&#160;    (lochrom_offspring.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#a4d1d15f6be16c0d0a23824033993aa71">getString</a>(),</div><div class="line"><a name="l00588"></a><span class="lineno">  588</span>&#160;     T_CLUSTERIDX(<a class="code" href="clustering__common_8hpp.html#a24b99685a442a97eb2ae902d09fb8f88">UNKNOWN_CLUSTER_IDX</a>),</div><div class="line"><a name="l00589"></a><span class="lineno">  589</span>&#160;     lochrom_offspring.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#aac60dd08cf0d29f08845a6381d84edad">getStringSize</a>()</div><div class="line"><a name="l00590"></a><span class="lineno">  590</span>&#160;     );</div><div class="line"><a name="l00591"></a><span class="lineno">  591</span>&#160;</div><div class="line"><a name="l00592"></a><span class="lineno">  592</span>&#160;  T_CLUSTERIDX *larraycidx_parent    = aichrom_parent1.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#a4d1d15f6be16c0d0a23824033993aa71">getString</a>();</div><div class="line"><a name="l00593"></a><span class="lineno">  593</span>&#160;  T_CLUSTERIDX *larraycidx_offspring = lochrom_offspring.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#a4d1d15f6be16c0d0a23824033993aa71">getString</a>();</div><div class="line"><a name="l00594"></a><span class="lineno">  594</span>&#160;  <span class="keywordflow">for</span> (<a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a> lui_i = 0;</div><div class="line"><a name="l00595"></a><span class="lineno">  595</span>&#160;       lui_i &lt; gaencode::ChromosomeGGA&lt;T_CLUSTERIDX,T_METRIC&gt;::getElementSize();</div><div class="line"><a name="l00596"></a><span class="lineno">  596</span>&#160;       lui_i++)</div><div class="line"><a name="l00597"></a><span class="lineno">  597</span>&#160;    {</div><div class="line"><a name="l00598"></a><span class="lineno">  598</span>&#160;      <span class="keywordflow">if</span> ( lpaircidx_parent1.first &lt;= *larraycidx_parent &amp;&amp; *larraycidx_parent &lt;= lpaircidx_parent1.second) {</div><div class="line"><a name="l00599"></a><span class="lineno">  599</span>&#160;        *larraycidx_offspring = *larraycidx_parent - lpaircidx_parent1.first;</div><div class="line"><a name="l00600"></a><span class="lineno">  600</span>&#160;        ++lvectort_numInstClusterK.at(*larraycidx_offspring);</div><div class="line"><a name="l00601"></a><span class="lineno">  601</span>&#160;      }</div><div class="line"><a name="l00602"></a><span class="lineno">  602</span>&#160;      ++larraycidx_parent;</div><div class="line"><a name="l00603"></a><span class="lineno">  603</span>&#160;      ++larraycidx_offspring;</div><div class="line"><a name="l00604"></a><span class="lineno">  604</span>&#160;    }</div><div class="line"><a name="l00605"></a><span class="lineno">  605</span>&#160;</div><div class="line"><a name="l00606"></a><span class="lineno">  606</span>&#160;  T_CLUSTERIDX lcidx_beginKparent2 = lpaircidx_parent1.second - lpaircidx_parent1.first + 1;</div><div class="line"><a name="l00607"></a><span class="lineno">  607</span>&#160;  larraycidx_parent    = aichrom_parent2.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#a4d1d15f6be16c0d0a23824033993aa71">getString</a>();</div><div class="line"><a name="l00608"></a><span class="lineno">  608</span>&#160;  larraycidx_offspring = lochrom_offspring.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#a4d1d15f6be16c0d0a23824033993aa71">getString</a>();</div><div class="line"><a name="l00609"></a><span class="lineno">  609</span>&#160;  <span class="keywordflow">for</span> (<a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a> lui_i = 0;</div><div class="line"><a name="l00610"></a><span class="lineno">  610</span>&#160;       lui_i &lt; gaencode::ChromosomeGGA&lt;T_CLUSTERIDX,T_METRIC&gt;::getElementSize();</div><div class="line"><a name="l00611"></a><span class="lineno">  611</span>&#160;       lui_i++)</div><div class="line"><a name="l00612"></a><span class="lineno">  612</span>&#160;    {</div><div class="line"><a name="l00613"></a><span class="lineno">  613</span>&#160;    <span class="keywordflow">if</span> ( (*larraycidx_offspring == <a class="code" href="clustering__common_8hpp.html#a24b99685a442a97eb2ae902d09fb8f88">UNKNOWN_CLUSTER_IDX</a>) &amp;&amp;</div><div class="line"><a name="l00614"></a><span class="lineno">  614</span>&#160;         (lpaircidx_parent2.first &lt;= *larraycidx_parent &amp;&amp; *larraycidx_parent &lt;= lpaircidx_parent2.second)</div><div class="line"><a name="l00615"></a><span class="lineno">  615</span>&#160;         )</div><div class="line"><a name="l00616"></a><span class="lineno">  616</span>&#160;      {</div><div class="line"><a name="l00617"></a><span class="lineno">  617</span>&#160;        *larraycidx_offspring = *larraycidx_parent - lpaircidx_parent2.first + lcidx_beginKparent2;</div><div class="line"><a name="l00618"></a><span class="lineno">  618</span>&#160;        ++lvectort_numInstClusterK.at(*larraycidx_offspring);</div><div class="line"><a name="l00619"></a><span class="lineno">  619</span>&#160;        </div><div class="line"><a name="l00620"></a><span class="lineno">  620</span>&#160;      }</div><div class="line"><a name="l00621"></a><span class="lineno">  621</span>&#160;    ++larraycidx_parent;</div><div class="line"><a name="l00622"></a><span class="lineno">  622</span>&#160;    ++larraycidx_offspring;</div><div class="line"><a name="l00623"></a><span class="lineno">  623</span>&#160;  }</div><div class="line"><a name="l00624"></a><span class="lineno">  624</span>&#160;  </div><div class="line"><a name="l00625"></a><span class="lineno">  625</span>&#160;  larraycidx_offspring = lochrom_offspring.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#a4d1d15f6be16c0d0a23824033993aa71">getString</a>();</div><div class="line"><a name="l00626"></a><span class="lineno">  626</span>&#160;  <span class="keywordflow">for</span> (<a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a> lui_i = 0;</div><div class="line"><a name="l00627"></a><span class="lineno">  627</span>&#160;       lui_i &lt; gaencode::ChromosomeGGA&lt;T_CLUSTERIDX,T_METRIC&gt;::getElementSize();</div><div class="line"><a name="l00628"></a><span class="lineno">  628</span>&#160;       lui_i++)</div><div class="line"><a name="l00629"></a><span class="lineno">  629</span>&#160;    {</div><div class="line"><a name="l00630"></a><span class="lineno">  630</span>&#160;    <span class="keywordflow">if</span> ( (*larraycidx_offspring == <a class="code" href="clustering__common_8hpp.html#a24b99685a442a97eb2ae902d09fb8f88">UNKNOWN_CLUSTER_IDX</a>) ) {</div><div class="line"><a name="l00631"></a><span class="lineno">  631</span>&#160;      T_CLUSTERIDX lcidx_randK =</div><div class="line"><a name="l00632"></a><span class="lineno">  632</span>&#160;        uniformdis_cidx_KOffspring(<a class="code" href="ga__clustering__operator_8hpp.html#acee5944d570f2fb7efdf1d4c801b30fb">gmt19937_eng</a>);</div><div class="line"><a name="l00633"></a><span class="lineno">  633</span>&#160;      *larraycidx_offspring = lcidx_randK;</div><div class="line"><a name="l00634"></a><span class="lineno">  634</span>&#160;      ++lvectort_numInstClusterK.at(*larraycidx_offspring);</div><div class="line"><a name="l00635"></a><span class="lineno">  635</span>&#160;    }</div><div class="line"><a name="l00636"></a><span class="lineno">  636</span>&#160;    ++larraycidx_offspring;</div><div class="line"><a name="l00637"></a><span class="lineno">  637</span>&#160;  }</div><div class="line"><a name="l00638"></a><span class="lineno">  638</span>&#160;</div><div class="line"><a name="l00639"></a><span class="lineno">  639</span>&#160;  std::vector&lt;uintidx&gt; lvectorcidx_clustersKeep;</div><div class="line"><a name="l00640"></a><span class="lineno">  640</span>&#160;</div><div class="line"><a name="l00641"></a><span class="lineno">  641</span>&#160;  lvectorcidx_clustersKeep.reserve(lvectort_numInstClusterK.size());</div><div class="line"><a name="l00642"></a><span class="lineno">  642</span>&#160;  <span class="keywordflow">for</span> ( <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a> lui_i = 0; lui_i &lt; lvectort_numInstClusterK.size(); lui_i++) {</div><div class="line"><a name="l00643"></a><span class="lineno">  643</span>&#160;    <span class="keywordflow">if</span> ( lvectort_numInstClusterK[lui_i] != 0 ) {</div><div class="line"><a name="l00644"></a><span class="lineno">  644</span>&#160;      lvectorcidx_clustersKeep.push_back(lui_i);</div><div class="line"><a name="l00645"></a><span class="lineno">  645</span>&#160;    }</div><div class="line"><a name="l00646"></a><span class="lineno">  646</span>&#160;  }</div><div class="line"><a name="l00647"></a><span class="lineno">  647</span>&#160;  <span class="keywordflow">if</span> (lvectort_numInstClusterK.size() !=  lvectorcidx_clustersKeep.size() ) {</div><div class="line"><a name="l00648"></a><span class="lineno">  648</span>&#160;    lochrom_offspring.<a class="code" href="classgaencode_1_1_chromosome_g_g_a.html#a846cdec17d362c23f8c7aa71ebc397c2">decrementGroupSecSize</a></div><div class="line"><a name="l00649"></a><span class="lineno">  649</span>&#160;      (lvectort_numInstClusterK.size() - lvectorcidx_clustersKeep.size() );</div><div class="line"><a name="l00650"></a><span class="lineno">  650</span>&#160;    <a class="code" href="namespacegaintegerop.html#ac5569129f257484a01a32fca9ef280cd">gaintegerop::labelKeep</a></div><div class="line"><a name="l00651"></a><span class="lineno">  651</span>&#160;      &lt;T_CLUSTERIDX,T_METRIC&gt;</div><div class="line"><a name="l00652"></a><span class="lineno">  652</span>&#160;      (lochrom_offspring,</div><div class="line"><a name="l00653"></a><span class="lineno">  653</span>&#160;       lvectorcidx_clustersKeep</div><div class="line"><a name="l00654"></a><span class="lineno">  654</span>&#160;       );</div><div class="line"><a name="l00655"></a><span class="lineno">  655</span>&#160;</div><div class="line"><a name="l00656"></a><span class="lineno">  656</span>&#160;  }</div><div class="line"><a name="l00657"></a><span class="lineno">  657</span>&#160;  </div><div class="line"><a name="l00658"></a><span class="lineno">  658</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l00659"></a><span class="lineno">  659</span>&#160;  <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l00660"></a><span class="lineno">  660</span>&#160;    std::cout &lt;&lt; lpc_labelFunc</div><div class="line"><a name="l00661"></a><span class="lineno">  661</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;: OUT(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="stringliteral">&quot;)\n&quot;</span>;</div><div class="line"><a name="l00662"></a><span class="lineno">  662</span>&#160;    lochrom_offspring.<a class="code" href="classgaencode_1_1_chromosome_g_g_a.html#a1b069cf9c5179f7aff064081f72aefb6">print</a>();</div><div class="line"><a name="l00663"></a><span class="lineno">  663</span>&#160;    std::cout &lt;&lt; std::endl;</div><div class="line"><a name="l00664"></a><span class="lineno">  664</span>&#160;        </div><div class="line"><a name="l00665"></a><span class="lineno">  665</span>&#160;  }</div><div class="line"><a name="l00666"></a><span class="lineno">  666</span>&#160;  --geiinparam_verbose;</div><div class="line"><a name="l00667"></a><span class="lineno">  667</span>&#160;<span class="preprocessor">#endif //__VERBOSE_YES</span></div><div class="line"><a name="l00668"></a><span class="lineno">  668</span>&#160;</div><div class="line"><a name="l00669"></a><span class="lineno">  669</span>&#160;  <span class="keywordflow">return</span> lochrom_offspring;</div><div class="line"><a name="l00670"></a><span class="lineno">  670</span>&#160;} </div><div class="line"><a name="l00671"></a><span class="lineno">  671</span>&#160;</div><div class="line"><a name="l00672"></a><span class="lineno">  672</span>&#160;</div><div class="line"><a name="l00681"></a><span class="lineno">  681</span>&#160;<span class="keyword">template</span> &lt;<span class="keyword">typename</span> T_CLUSTERIDX,</div><div class="line"><a name="l00682"></a><span class="lineno">  682</span>&#160;          <span class="keyword">typename</span> T_REAL,</div><div class="line"><a name="l00683"></a><span class="lineno">  683</span>&#160;          <span class="keyword">typename</span> T_FEATURE,</div><div class="line"><a name="l00684"></a><span class="lineno">  684</span>&#160;          <span class="keyword">typename</span> T_INSTANCES_CLUSTER_K,</div><div class="line"><a name="l00685"></a><span class="lineno">  685</span>&#160;          <span class="keyword">typename</span> T_FEATURE_SUM,</div><div class="line"><a name="l00686"></a><span class="lineno">  686</span>&#160;          <span class="keyword">typename</span> INPUT_ITERATOR</div><div class="line"><a name="l00687"></a><span class="lineno">  687</span>&#160;          &gt;</div><div class="line"><a name="l00688"></a><span class="lineno">  688</span>&#160;<span class="keywordtype">void</span></div><div class="line"><a name="l00689"></a><span class="lineno">  689</span>&#160;<a class="code" href="namespacegaclusteringop.html#a5c9d8a0cc06ff5663e3fb5c186e852cd">crossoverCGA</a></div><div class="line"><a name="l00690"></a><span class="lineno"><a class="line" href="namespacegaclusteringop.html#a5c9d8a0cc06ff5663e3fb5c186e852cd">  690</a></span>&#160;(<a class="code" href="classgaencode_1_1_chrom_fixed_length.html">gaencode::ChromFixedLength&lt;T_CLUSTERIDX,T_REAL&gt;</a>   &amp;aochrom_childC,</div><div class="line"><a name="l00691"></a><span class="lineno">  691</span>&#160; <a class="code" href="classgaencode_1_1_chrom_fixed_length.html">gaencode::ChromFixedLength&lt;T_CLUSTERIDX,T_REAL&gt;</a>   &amp;aichrom_parentA,</div><div class="line"><a name="l00692"></a><span class="lineno">  692</span>&#160; <a class="code" href="classgaencode_1_1_chrom_fixed_length.html">gaencode::ChromFixedLength&lt;T_CLUSTERIDX,T_REAL&gt;</a>   &amp;aichrom_parentB,</div><div class="line"><a name="l00693"></a><span class="lineno">  693</span>&#160; <a class="code" href="classmat_1_1_matrix_row.html">mat::MatrixRow&lt;T_FEATURE&gt;</a>                         &amp;aomatrixrowt_centroids,</div><div class="line"><a name="l00694"></a><span class="lineno">  694</span>&#160; <a class="code" href="classmat_1_1_matrix_row.html">mat::MatrixRow&lt;T_FEATURE_SUM&gt;</a>                     &amp;aomatrixrowt_sumInstCluster,</div><div class="line"><a name="l00695"></a><span class="lineno">  695</span>&#160; std::vector&lt;T_INSTANCES_CLUSTER_K&gt;          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702</span>&#160;  <span class="keyword">const</span> <span class="keywordtype">char</span>* lpc_labelFunc = <span class="stringliteral">&quot;gaclusteringop::crossoverCGA&quot;</span>;</div><div class="line"><a name="l00703"></a><span class="lineno">  703</span>&#160;  ++geiinparam_verbose;</div><div class="line"><a name="l00704"></a><span class="lineno">  704</span>&#160;  <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l00705"></a><span class="lineno">  705</span>&#160;    std::cout &lt;&lt; lpc_labelFunc</div><div class="line"><a name="l00706"></a><span class="lineno">  706</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;:  IN(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="charliteral">&#39;)&#39;</span></div><div class="line"><a name="l00707"></a><span class="lineno">  707</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;\n(output gaencode::ChromFixedLength&lt;&gt;: aochrom_childC[&quot;</span> </div><div class="line"><a name="l00708"></a><span class="lineno">  708</span>&#160;              &lt;&lt; &amp;aochrom_childC &lt;&lt; <span class="stringliteral">&quot;]\n&quot;</span>;</div><div class="line"><a name="l00709"></a><span class="lineno">  709</span>&#160;    std::ostringstream lostrstream_labelchildA;</div><div class="line"><a name="l00710"></a><span class="lineno">  710</span>&#160;    lostrstream_labelchildA &lt;&lt; <span class="stringliteral">&quot;childA:&quot;</span> &lt;&lt; lpc_labelFunc;</div><div class="line"><a name="l00711"></a><span class="lineno">  711</span>&#160;    aichrom_parentA.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#a2d0b4e4d46c2f224ce34cf795407b407">print</a>(std::cout,lostrstream_labelchildA.str().c_str());</div><div class="line"><a name="l00712"></a><span class="lineno">  712</span>&#160;    std::cout  &lt;&lt; <span class="stringliteral">&quot;\ninput  gaencode::ChromFixedLength&lt;&gt;: aichrom_parentB[&quot;</span> </div><div class="line"><a name="l00713"></a><span class="lineno">  713</span>&#160;              &lt;&lt; &amp;aichrom_parentB &lt;&lt; <span class="stringliteral">&quot;]\n&quot;</span></div><div class="line"><a name="l00714"></a><span class="lineno">  714</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;input  dist::Dist&lt;T_REAL,T_FEATURE&gt; &amp;aifunc2p_dist[&quot;</span> </div><div class="line"><a name="l00715"></a><span class="lineno">  715</span>&#160;              &lt;&lt; &amp;aifunc2p_dist &lt;&lt; <span class="charliteral">&#39;]&#39;</span></div><div class="line"><a name="l00716"></a><span class="lineno">  716</span>&#160;              &lt;&lt;  <span class="stringliteral">&quot;\n)&quot;</span></div><div class="line"><a name="l00717"></a><span class="lineno">  717</span>&#160;              &lt;&lt; std::endl;</div><div class="line"><a name="l00718"></a><span class="lineno">  718</span>&#160;  }</div><div class="line"><a name="l00719"></a><span class="lineno">  719</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l00720"></a><span class="lineno">  720</span>&#160;</div><div class="line"><a name="l00721"></a><span class="lineno">  721</span>&#160;  aochrom_childC = aichrom_parentB;</div><div class="line"><a name="l00722"></a><span class="lineno">  722</span>&#160;  </div><div class="line"><a name="l00723"></a><span class="lineno">  723</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l00724"></a><span class="lineno">  724</span>&#160;  ++geiinparam_verbose;</div><div class="line"><a name="l00725"></a><span class="lineno">  725</span>&#160;  <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l00726"></a><span class="lineno">  726</span>&#160;    std::cout &lt;&lt; <span class="stringliteral">&quot;CROSSOVERCGA 1. RANDOMLY CHOOSES c in {1,...,k_1}:  IN&quot;</span></div><div class="line"><a name="l00727"></a><span class="lineno">  727</span>&#160;              &lt;&lt; <span class="charliteral">&#39;(&#39;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="charliteral">&#39;)&#39;</span></div><div class="line"><a name="l00728"></a><span class="lineno">  728</span>&#160;              &lt;&lt; std::endl; </div><div class="line"><a name="l00729"></a><span class="lineno">  729</span>&#160;  }</div><div class="line"><a name="l00730"></a><span class="lineno">  730</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l00731"></a><span class="lineno">  731</span>&#160;  </div><div class="line"><a name="l00732"></a><span class="lineno">  732</span>&#160;  std::uniform_int_distribution&lt;T_CLUSTERIDX&gt; uniformdis_cidx_1K1</div><div class="line"><a name="l00733"></a><span class="lineno">  733</span>&#160;    (1,aichrom_parentA.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#ab9d0b01b82cd679c6232dcd78c13e9d2">getGene</a>(<a class="code" href="classgaencode_1_1_chrom_fixed_length.html">gaencode::ChromFixedLength&lt;T_CLUSTERIDX,T_REAL&gt;::stcgetStringSize</a>()-1));</div><div class="line"><a name="l00734"></a><span class="lineno">  734</span>&#160;</div><div class="line"><a name="l00735"></a><span class="lineno">  735</span>&#160;  std::uniform_int_distribution&lt;T_CLUSTERIDX&gt; uniformdis_cidx_0K1</div><div class="line"><a name="l00736"></a><span class="lineno">  736</span>&#160;    (0,aichrom_parentA.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#ab9d0b01b82cd679c6232dcd78c13e9d2">getGene</a>(<a class="code" href="classgaencode_1_1_chrom_fixed_length.html">gaencode::ChromFixedLength&lt;T_CLUSTERIDX,T_REAL&gt;::stcgetStringSize</a>()-1)-1);</div><div class="line"><a name="l00737"></a><span class="lineno">  737</span>&#160;</div><div class="line"><a name="l00738"></a><span class="lineno">  738</span>&#160;  T_CLUSTERIDX lcidx_c = uniformdis_cidx_1K1(<a class="code" href="ga__clustering__operator_8hpp.html#acee5944d570f2fb7efdf1d4c801b30fb">gmt19937_eng</a>);</div><div class="line"><a name="l00739"></a><span class="lineno">  739</span>&#160;  </div><div class="line"><a name="l00740"></a><span class="lineno">  740</span>&#160;  std::unordered_set&lt;T_CLUSTERIDX&gt;&amp;&amp; lunorderedset_cidx_0K1 =</div><div class="line"><a name="l00741"></a><span class="lineno">  741</span>&#160;    <a class="code" href="namespaceprob.html#a15090755bafc59aa295f2d02be64af8c">prob::getWithoutRepeatsSet</a></div><div class="line"><a name="l00742"></a><span class="lineno">  742</span>&#160;    (lcidx_c,</div><div class="line"><a name="l00743"></a><span class="lineno">  743</span>&#160;     [&amp;]() -&gt; T_CLUSTERIDX</div><div class="line"><a name="l00744"></a><span class="lineno">  744</span>&#160;     {</div><div class="line"><a name="l00745"></a><span class="lineno">  745</span>&#160;       <span class="keywordflow">return</span> uniformdis_cidx_0K1(<a class="code" href="ga__clustering__operator_8hpp.html#acee5944d570f2fb7efdf1d4c801b30fb">gmt19937_eng</a>);</div><div class="line"><a name="l00746"></a><span class="lineno">  746</span>&#160;     }</div><div class="line"><a name="l00747"></a><span class="lineno">  747</span>&#160;     );</div><div class="line"><a name="l00748"></a><span class="lineno">  748</span>&#160;</div><div class="line"><a name="l00749"></a><span class="lineno">  749</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l00750"></a><span class="lineno">  750</span>&#160;  <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l00751"></a><span class="lineno">  751</span>&#160;    std::cout</div><div class="line"><a name="l00752"></a><span class="lineno">  752</span>&#160;      &lt;&lt; <span class="stringliteral">&quot;CROSSOVERCGA 1. RANDOMLY CHOOSES c in {1,...,k_1}: OUT&quot;</span></div><div class="line"><a name="l00753"></a><span class="lineno">  753</span>&#160;      &lt;&lt; <span class="charliteral">&#39;(&#39;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="charliteral">&#39;)&#39;</span></div><div class="line"><a name="l00754"></a><span class="lineno">  754</span>&#160;      &lt;&lt; <span class="stringliteral">&quot;\nc = &quot;</span> &lt;&lt; lcidx_c &lt;&lt; <span class="stringliteral">&quot; in {1,...,&quot;</span></div><div class="line"><a name="l00755"></a><span class="lineno">  755</span>&#160;      &lt;&lt; aichrom_parentA.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#ab9d0b01b82cd679c6232dcd78c13e9d2">getGene</a>(<a class="code" href="classgaencode_1_1_chrom_fixed_length.html">gaencode::ChromFixedLength&lt;T_CLUSTERIDX,T_REAL&gt;::stcgetStringSize</a>()-1)</div><div class="line"><a name="l00756"></a><span class="lineno">  756</span>&#160;      &lt;&lt; <span class="charliteral">&#39;}&#39;</span></div><div class="line"><a name="l00757"></a><span class="lineno">  757</span>&#160;      &lt;&lt; std::endl; </div><div class="line"><a name="l00758"></a><span class="lineno">  758</span>&#160;  }</div><div class="line"><a name="l00759"></a><span class="lineno">  759</span>&#160;  --geiinparam_verbose;</div><div class="line"><a name="l00760"></a><span class="lineno">  760</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l00761"></a><span class="lineno">  761</span>&#160;</div><div class="line"><a name="l00762"></a><span class="lineno">  762</span>&#160;  <a class="code" href="classpartition_1_1_partition_label.html">partition::PartitionLabel</a></div><div class="line"><a name="l00763"></a><span class="lineno">  763</span>&#160;    &lt;T_CLUSTERIDX&gt;</div><div class="line"><a name="l00764"></a><span class="lineno">  764</span>&#160;    lpartition_clustersParent1</div><div class="line"><a name="l00765"></a><span class="lineno">  765</span>&#160;    (aichrom_parentA.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#a4d1d15f6be16c0d0a23824033993aa71">getString</a>(),</div><div class="line"><a name="l00766"></a><span class="lineno">  766</span>&#160;     <a class="code" href="classgaencode_1_1_chrom_fixed_length.html#a406e67fa48d6cdfc7a01f0c6e04f373b">gaencode::ChromFixedLength&lt;T_CLUSTERIDX,T_REAL&gt;::stcgetStringSize</a>()-1,</div><div class="line"><a name="l00767"></a><span class="lineno">  767</span>&#160;     aichrom_parentA.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#ab9d0b01b82cd679c6232dcd78c13e9d2">getGene</a></div><div class="line"><a name="l00768"></a><span class="lineno">  768</span>&#160;     (<a class="code" href="classgaencode_1_1_chrom_fixed_length.html">gaencode::ChromFixedLength&lt;T_CLUSTERIDX,T_REAL&gt;::stcgetStringSize</a>()-1)</div><div class="line"><a name="l00769"></a><span class="lineno">  769</span>&#160;     );</div><div class="line"><a name="l00770"></a><span class="lineno">  770</span>&#160;  </div><div class="line"><a name="l00771"></a><span class="lineno">  771</span>&#160;  <a class="code" href="classds_1_1_partition_linked.html">ds::PartitionLinked&lt;T_CLUSTERIDX&gt;</a></div><div class="line"><a name="l00772"></a><span class="lineno">  772</span>&#160;    lpartlink_memberShipParent1 =</div><div class="line"><a name="l00773"></a><span class="lineno">  773</span>&#160;    <a class="code" href="namespaceds.html#a3aae03bcc1455a8c5549ef2a03d9c93c">ds::getPartitionlinked</a></div><div class="line"><a name="l00774"></a><span class="lineno">  774</span>&#160;    (lpartition_clustersParent1);</div><div class="line"><a name="l00775"></a><span class="lineno">  775</span>&#160;</div><div class="line"><a name="l00776"></a><span class="lineno">  776</span>&#160;  <a class="code" href="classds_1_1_iterator_partition_linked.html">ds::IteratorPartitionLinked&lt;T_CLUSTERIDX&gt;</a></div><div class="line"><a name="l00777"></a><span class="lineno">  777</span>&#160;    literpartlink_parent1(&amp;lpartlink_memberShipParent1);</div><div class="line"><a name="l00778"></a><span class="lineno">  778</span>&#160;</div><div class="line"><a name="l00779"></a><span class="lineno">  779</span>&#160;  std::unordered_set&lt;T_CLUSTERIDX&gt; lounorderedset_affected;</div><div class="line"><a name="l00780"></a><span class="lineno">  780</span>&#160;  lounorderedset_affected.reserve(lunorderedset_cidx_0K1.size());</div><div class="line"><a name="l00781"></a><span class="lineno">  781</span>&#160;  </div><div class="line"><a name="l00782"></a><span class="lineno">  782</span>&#160;  <span class="keywordflow">for</span> (<span class="keyword">const</span> <span class="keyword">auto</span> lcidx_gene: lunorderedset_cidx_0K1) {</div><div class="line"><a name="l00783"></a><span class="lineno">  783</span>&#160;    <span class="keywordflow">for</span> ( literpartlink_parent1.<a class="code" href="classds_1_1_iterator_partition_linked.html#ad171cb96653fadaec272389381a4f8b4">begin</a>(lcidx_gene);</div><div class="line"><a name="l00784"></a><span class="lineno">  784</span>&#160;          literpartlink_parent1.<a class="code" href="classds_1_1_iterator_partition_linked.html#af0e179fae69c0d4f047082ee44783613">end</a>();</div><div class="line"><a name="l00785"></a><span class="lineno">  785</span>&#160;          literpartlink_parent1.<a class="code" href="classds_1_1_iterator_partition_linked.html#a83b887be41c97dc0bdfc47a02abbc383">next</a>()</div><div class="line"><a name="l00786"></a><span class="lineno">  786</span>&#160;          )</div><div class="line"><a name="l00787"></a><span class="lineno">  787</span>&#160;      {</div><div class="line"><a name="l00788"></a><span class="lineno">  788</span>&#160;        lounorderedset_affected.insert</div><div class="line"><a name="l00789"></a><span class="lineno">  789</span>&#160;          ( aochrom_childC.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#ab9d0b01b82cd679c6232dcd78c13e9d2">getGene</a>(literpartlink_parent1.<a class="code" href="classds_1_1_iterator_partition_linked.html#a1a031c033d0d2d1c6982ced4e0473831">getValue</a>()));</div><div class="line"><a name="l00790"></a><span class="lineno">  790</span>&#160;      }  </div><div class="line"><a name="l00791"></a><span class="lineno">  791</span>&#160;  }</div><div class="line"><a name="l00792"></a><span class="lineno">  792</span>&#160;</div><div class="line"><a name="l00793"></a><span class="lineno">  793</span>&#160;</div><div class="line"><a name="l00794"></a><span class="lineno">  794</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l00795"></a><span class="lineno">  795</span>&#160;  ++geiinparam_verbose;</div><div class="line"><a name="l00796"></a><span class="lineno">  796</span>&#160;  <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l00797"></a><span class="lineno">  797</span>&#160;    <a class="code" href="namespaceinout.html#a0c10a45877a347dec0d4ec4e5b05b828">inout::containerprint</a></div><div class="line"><a name="l00798"></a><span class="lineno">  798</span>&#160;    (lounorderedset_affected.begin(),</div><div class="line"><a name="l00799"></a><span class="lineno">  799</span>&#160;     lounorderedset_affected.end(),</div><div class="line"><a name="l00800"></a><span class="lineno">  800</span>&#160;     std::cout,</div><div class="line"><a name="l00801"></a><span class="lineno">  801</span>&#160;     <span class="stringliteral">&quot;CROSSOVERCGA 2. GENES INDIRECTLY AFFECTED&quot;</span>,</div><div class="line"><a name="l00802"></a><span class="lineno">  802</span>&#160;     <span class="charliteral">&#39;,&#39;</span></div><div class="line"><a name="l00803"></a><span class="lineno">  803</span>&#160;     );</div><div class="line"><a name="l00804"></a><span class="lineno">  804</span>&#160;  std::cout &lt;&lt; std::endl;</div><div class="line"><a name="l00805"></a><span class="lineno">  805</span>&#160;  }</div><div class="line"><a name="l00806"></a><span class="lineno">  806</span>&#160;  --geiinparam_verbose;</div><div class="line"><a name="l00807"></a><span class="lineno">  807</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l00808"></a><span class="lineno">  808</span>&#160;  </div><div class="line"><a name="l00809"></a><span class="lineno">  809</span>&#160;  <span class="keywordflow">for</span> ( <span class="keyword">auto</span> liter_gene = aochrom_childC.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#af29275f1369d5ba7ca30da4831a528db">begin</a>(); liter_gene != aochrom_childC.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#a014e2a6eac1f0dc7655e37b2a8355a4e">end</a>()-1; liter_gene++)</div><div class="line"><a name="l00810"></a><span class="lineno">  810</span>&#160;    {</div><div class="line"><a name="l00811"></a><span class="lineno">  811</span>&#160;      <span class="keyword">auto</span>  liter_setaffected = lounorderedset_affected.find(*liter_gene);</div><div class="line"><a name="l00812"></a><span class="lineno">  812</span>&#160;      <span class="keywordflow">if</span> ( liter_setaffected != lounorderedset_affected.end() )</div><div class="line"><a name="l00813"></a><span class="lineno">  813</span>&#160;        *liter_gene = T_CLUSTERIDX(<a class="code" href="nearestinstance__operator_8hpp.html#ac6dfec13abcffd9b8f8abd4ad0cf6f11">NEARESTCENTROID_UNKNOWN</a>);</div><div class="line"><a name="l00814"></a><span class="lineno">  814</span>&#160;    }</div><div class="line"><a name="l00815"></a><span class="lineno">  815</span>&#160;</div><div class="line"><a name="l00816"></a><span class="lineno">  816</span>&#160;  <span class="keywordflow">for</span> (<span class="keyword">const</span> <span class="keyword">auto</span> lcidx_gene: lunorderedset_cidx_0K1) {</div><div class="line"><a name="l00817"></a><span class="lineno">  817</span>&#160;    <span class="keywordflow">for</span> ( literpartlink_parent1.<a class="code" href="classds_1_1_iterator_partition_linked.html#ad171cb96653fadaec272389381a4f8b4">begin</a>(lcidx_gene);</div><div class="line"><a name="l00818"></a><span class="lineno">  818</span>&#160;          literpartlink_parent1.<a class="code" href="classds_1_1_iterator_partition_linked.html#af0e179fae69c0d4f047082ee44783613">end</a>();</div><div class="line"><a name="l00819"></a><span class="lineno">  819</span>&#160;          literpartlink_parent1.<a class="code" href="classds_1_1_iterator_partition_linked.html#a83b887be41c97dc0bdfc47a02abbc383">next</a>()</div><div class="line"><a name="l00820"></a><span class="lineno">  820</span>&#160;          )</div><div class="line"><a name="l00821"></a><span class="lineno">  821</span>&#160;      {</div><div class="line"><a name="l00822"></a><span class="lineno">  822</span>&#160;        aochrom_childC.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#a62cd9d117ffefb43b4de56cf82bc44bc">setGene</a>(literpartlink_parent1.<a class="code" href="classds_1_1_iterator_partition_linked.html#a1a031c033d0d2d1c6982ced4e0473831">getValue</a>(),lcidx_gene);</div><div class="line"><a name="l00823"></a><span class="lineno">  823</span>&#160;      }  </div><div class="line"><a name="l00824"></a><span class="lineno">  824</span>&#160;  }</div><div class="line"><a name="l00825"></a><span class="lineno">  825</span>&#160;</div><div class="line"><a name="l00826"></a><span class="lineno">  826</span>&#160;</div><div class="line"><a name="l00827"></a><span class="lineno">  827</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l00828"></a><span class="lineno">  828</span>&#160;  ++geiinparam_verbose;</div><div class="line"><a name="l00829"></a><span class="lineno">  829</span>&#160;  <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l00830"></a><span class="lineno">  830</span>&#160;   aochrom_childC.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#a2d0b4e4d46c2f224ce34cf795407b407">print</a>(std::cout,<span class="stringliteral">&quot;CROSSOVERCGA 3. AFFECTED NOW CHANGED TO 0&quot;</span>);</div><div class="line"><a name="l00831"></a><span class="lineno">  831</span>&#160;   std::cout &lt;&lt; std::endl;</div><div class="line"><a name="l00832"></a><span class="lineno">  832</span>&#160;  }</div><div class="line"><a name="l00833"></a><span class="lineno">  833</span>&#160;  --geiinparam_verbose;</div><div class="line"><a name="l00834"></a><span class="lineno">  834</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l00835"></a><span class="lineno">  835</span>&#160;  </div><div class="line"><a name="l00836"></a><span class="lineno">  836</span>&#160;  <span class="comment">//renumber</span></div><div class="line"><a name="l00837"></a><span class="lineno">  837</span>&#160;  T_CLUSTERIDX lcidx_consecK = 0;</div><div class="line"><a name="l00838"></a><span class="lineno">  838</span>&#160;    </div><div class="line"><a name="l00839"></a><span class="lineno">  839</span>&#160;  std::map&lt;T_CLUSTERIDX,T_CLUSTERIDX&gt; mymap;</div><div class="line"><a name="l00840"></a><span class="lineno">  840</span>&#160;  <span class="keywordflow">for</span> ( <span class="keyword">auto</span> liter_gene = aochrom_childC.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#af29275f1369d5ba7ca30da4831a528db">begin</a>(); liter_gene != aochrom_childC.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#a014e2a6eac1f0dc7655e37b2a8355a4e">end</a>()-1; liter_gene++)</div><div class="line"><a name="l00841"></a><span class="lineno">  841</span>&#160;    {</div><div class="line"><a name="l00842"></a><span class="lineno">  842</span>&#160;      <span class="keywordflow">if</span> ( *liter_gene != T_CLUSTERIDX(<a class="code" href="nearestinstance__operator_8hpp.html#ac6dfec13abcffd9b8f8abd4ad0cf6f11">NEARESTCENTROID_UNKNOWN</a>) ) {</div><div class="line"><a name="l00843"></a><span class="lineno">  843</span>&#160;        <span class="keyword">auto</span> liter_map = mymap.find(*liter_gene);</div><div class="line"><a name="l00844"></a><span class="lineno">  844</span>&#160; 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liter_gene++)</div><div class="line"><a name="l00852"></a><span class="lineno">  852</span>&#160;    {</div><div class="line"><a name="l00853"></a><span class="lineno">  853</span>&#160;      <span class="keywordflow">if</span> ( *liter_gene != T_CLUSTERIDX(<a class="code" href="nearestinstance__operator_8hpp.html#ac6dfec13abcffd9b8f8abd4ad0cf6f11">NEARESTCENTROID_UNKNOWN</a>) ) {</div><div class="line"><a name="l00854"></a><span class="lineno">  854</span>&#160;        *liter_gene = mymap[*liter_gene];</div><div class="line"><a name="l00855"></a><span class="lineno">  855</span>&#160;      }</div><div class="line"><a name="l00856"></a><span class="lineno">  856</span>&#160;    }</div><div class="line"><a name="l00857"></a><span class="lineno">  857</span>&#160;</div><div class="line"><a name="l00858"></a><span class="lineno">  858</span>&#160;  aochrom_childC.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#a62cd9d117ffefb43b4de56cf82bc44bc">setGene</a></div><div class="line"><a name="l00859"></a><span class="lineno">  859</span>&#160; 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    <a class="code" href="classgaencode_1_1_chrom_fixed_length.html#a406e67fa48d6cdfc7a01f0c6e04f373b">gaencode::ChromFixedLength&lt;T_CLUSTERIDX,T_REAL&gt;::stcgetStringSize</a>()-1,</div><div class="line"><a name="l00868"></a><span class="lineno">  868</span>&#160;     aochrom_childC.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#ab9d0b01b82cd679c6232dcd78c13e9d2">getGene</a></div><div class="line"><a name="l00869"></a><span class="lineno">  869</span>&#160;     (<a class="code" href="classgaencode_1_1_chrom_fixed_length.html">gaencode::ChromFixedLength&lt;T_CLUSTERIDX,T_REAL&gt;::stcgetStringSize</a>()-1)</div><div class="line"><a name="l00870"></a><span class="lineno">  870</span>&#160;     );</div><div class="line"><a name="l00871"></a><span class="lineno">  871</span>&#160;</div><div class="line"><a name="l00872"></a><span class="lineno">  872</span>&#160;  <a class="code" href="classmat_1_1_matrix_row.html">mat::MatrixRow&lt;T_FEATURE&gt;</a> </div><div class="line"><a name="l00873"></a><span class="lineno">  873</span>&#160;    lmatrixrowt_centroids</div><div class="line"><a name="l00874"></a><span class="lineno">  874</span>&#160;    ((<a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>) mymap.size(), </div><div class="line"><a name="l00875"></a><span class="lineno">  875</span>&#160;     <a class="code" href="classdata_1_1_instance.html#a90d1eaeb66cc1470bbfdb95434fdb761">data::Instance&lt;T_FEATURE&gt;::getNumDimensions</a>() </div><div class="line"><a name="l00876"></a><span class="lineno">  876</span>&#160;     );</div><div class="line"><a name="l00877"></a><span class="lineno">  877</span>&#160;  </div><div class="line"><a name="l00878"></a><span class="lineno">  878</span>&#160;  <a class="code" href="classmat_1_1_matrix_row.html">mat::MatrixRow&lt;T_FEATURE_SUM&gt;</a>       </div><div class="line"><a name="l00879"></a><span class="lineno">  879</span>&#160;    lmatrixrowt_sumInstCluster</div><div class="line"><a name="l00880"></a><span class="lineno">  880</span>&#160;    ((<a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>) mymap.size(),</div><div class="line"><a name="l00881"></a><span class="lineno">  881</span>&#160;     <a class="code" href="classdata_1_1_instance.html#a90d1eaeb66cc1470bbfdb95434fdb761">data::Instance&lt;T_FEATURE&gt;::getNumDimensions</a>()</div><div class="line"><a name="l00882"></a><span class="lineno">  882</span>&#160;     );</div><div class="line"><a name="l00883"></a><span class="lineno">  883</span>&#160;        </div><div class="line"><a name="l00884"></a><span class="lineno">  884</span>&#160;  std::vector&lt;T_INSTANCES_CLUSTER_K&gt; </div><div class="line"><a name="l00885"></a><span class="lineno">  885</span>&#160;    lvectort_numInstClusterK((<a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>) mymap.size());</div><div class="line"><a name="l00886"></a><span class="lineno">  886</span>&#160;</div><div class="line"><a name="l00887"></a><span class="lineno">  887</span>&#160; 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 <a class="code" href="namespaceinterfacesse.html#afaa45a2a27710ea2dfa979289cf4961d">std::swap</a>(aomatrixrowt_centroids,lmatrixrowt_centroids);</div><div class="line"><a name="l00905"></a><span class="lineno">  905</span>&#160;  <a class="code" href="namespaceinterfacesse.html#afaa45a2a27710ea2dfa979289cf4961d">std::swap</a>(aomatrixrowt_sumInstCluster,lmatrixrowt_sumInstCluster);</div><div class="line"><a name="l00906"></a><span class="lineno">  906</span>&#160;  <a class="code" href="namespaceinterfacesse.html#afaa45a2a27710ea2dfa979289cf4961d">std::swap</a>(aovectort_numInstClusterK,lvectort_numInstClusterK);</div><div class="line"><a name="l00907"></a><span class="lineno">  907</span>&#160;          </div><div class="line"><a name="l00908"></a><span class="lineno">  908</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l00909"></a><span class="lineno">  909</span>&#160;  <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l00910"></a><span class="lineno">  910</span>&#160;    std::cout &lt;&lt; lpc_labelFunc</div><div class="line"><a name="l00911"></a><span class="lineno">  911</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;: OUT(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="charliteral">&#39;)&#39;</span>;</div><div class="line"><a name="l00912"></a><span class="lineno">  912</span>&#160;    std::ostringstream lostrstream_labelchildC;</div><div class="line"><a name="l00913"></a><span class="lineno">  913</span>&#160;    lostrstream_labelchildC &lt;&lt; <span class="stringliteral">&quot;childC:&quot;</span> &lt;&lt; lpc_labelFunc;</div><div class="line"><a name="l00914"></a><span class="lineno">  914</span>&#160;    aochrom_childC.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#a2d0b4e4d46c2f224ce34cf795407b407">print</a>(std::cout,lostrstream_labelchildC.str().c_str());</div><div class="line"><a name="l00915"></a><span class="lineno">  915</span>&#160;    std::cout &lt;&lt; std::endl;</div><div class="line"><a name="l00916"></a><span class="lineno">  916</span>&#160;    std::cout &lt;&lt; std::endl; </div><div class="line"><a name="l00917"></a><span class="lineno">  917</span>&#160;  }</div><div class="line"><a name="l00918"></a><span class="lineno">  918</span>&#160;  --geiinparam_verbose;</div><div class="line"><a name="l00919"></a><span class="lineno">  919</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l00920"></a><span class="lineno">  920</span>&#160;  </div><div class="line"><a name="l00921"></a><span class="lineno">  921</span>&#160;} <span class="comment">/*crossoverCGA*/</span></div><div class="line"><a name="l00922"></a><span class="lineno">  922</span>&#160;</div><div class="line"><a name="l00923"></a><span class="lineno">  923</span>&#160;  </div><div class="line"><a name="l00924"></a><span class="lineno">  924</span>&#160;<span class="comment">/*MUTATION---------------------------------------------------------------------</span></div><div class="line"><a name="l00925"></a><span class="lineno">  925</span>&#160;<span class="comment">*/</span></div><div class="line"><a name="l00926"></a><span class="lineno">  926</span>&#160;</div><div class="line"><a name="l00927"></a><span class="lineno">  927</span>&#160;  </div><div class="line"><a name="l00933"></a><span class="lineno">  933</span>&#160;<span class="keyword">template</span> &lt;<span class="keyword">typename</span> T_CLUSTERIDX,</div><div class="line"><a name="l00934"></a><span class="lineno">  934</span>&#160;           <span class="keyword">typename</span> T_REAL</div><div class="line"><a name="l00935"></a><span class="lineno">  935</span>&#160;           &gt;</div><div class="line"><a name="l00936"></a><span class="lineno">  936</span>&#160;<span class="keywordtype">void</span></div><div class="line"><a name="l00937"></a><span class="lineno">  937</span>&#160;<a class="code" href="namespacegaclusteringop.html#a935f199f5ca932fbaa301198fcc563f9">splittingMutation</a></div><div class="line"><a name="l00938"></a><span class="lineno"><a class="line" href="namespacegaclusteringop.html#a935f199f5ca932fbaa301198fcc563f9">  938</a></span>&#160;(<a class="code" href="classgaencode_1_1_chromosome_g_g_a.html">gaencode::ChromosomeGGA&lt;T_CLUSTERIDX,T_REAL&gt;</a>  &amp;aiochromab_toMutate)</div><div class="line"><a name="l00939"></a><span class="lineno">  939</span>&#160;{ </div><div class="line"><a name="l00940"></a><span class="lineno">  940</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l00941"></a><span class="lineno">  941</span>&#160;  <span class="keyword">const</span> <span class="keywordtype">char</span>* lpc_labelFunc = <span class="stringliteral">&quot;gabinaryop::splittingMutation&quot;</span>;</div><div class="line"><a name="l00942"></a><span class="lineno">  942</span>&#160;  ++geiinparam_verbose;</div><div class="line"><a name="l00943"></a><span class="lineno">  943</span>&#160;  <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l00944"></a><span class="lineno">  944</span>&#160;    std::cout &lt;&lt; lpc_labelFunc</div><div class="line"><a name="l00945"></a><span class="lineno">  945</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;:  IN(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="stringliteral">&quot;)\n&quot;</span>;</div><div class="line"><a name="l00946"></a><span class="lineno">  946</span>&#160;    aiochromab_toMutate.<a class="code" href="classgaencode_1_1_chromosome_g_g_a.html#a1b069cf9c5179f7aff064081f72aefb6">print</a>(std::cout,lpc_labelFunc);</div><div class="line"><a name="l00947"></a><span class="lineno">  947</span>&#160;    std::cout &lt;&lt; <span class="stringliteral">&quot;\n)&quot;</span></div><div class="line"><a name="l00948"></a><span class="lineno">  948</span>&#160;              &lt;&lt; std::endl;</div><div class="line"><a name="l00949"></a><span class="lineno">  949</span>&#160;   }</div><div class="line"><a name="l00950"></a><span class="lineno">  950</span>&#160;<span class="preprocessor">#endif //__VERBOSE_YES</span></div><div class="line"><a name="l00951"></a><span class="lineno">  951</span>&#160;</div><div class="line"><a name="l00952"></a><span class="lineno">  952</span>&#160;  T_CLUSTERIDX lcidx_ktoMutate = aiochromab_toMutate.<a class="code" href="classgaencode_1_1_chromosome_g_g_a.html#aad4d008731eebf9615ad62aa884cc518">getNumClusterK</a>();</div><div class="line"><a name="l00953"></a><span class="lineno">  953</span>&#160;  std::vector&lt;uintidx&gt; lvectorrt_numInstClusterK(lcidx_ktoMutate,0);</div><div class="line"><a name="l00954"></a><span class="lineno">  954</span>&#160;  T_CLUSTERIDX *larraycidx_toMutate = aiochromab_toMutate.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#a4d1d15f6be16c0d0a23824033993aa71">getString</a>();</div><div class="line"><a name="l00955"></a><span class="lineno">  955</span>&#160; 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    (lvectorprob_selectBySizeClusterK,</div><div class="line"><a name="l00971"></a><span class="lineno">  971</span>&#160;      T_CLUSTERIDX(0)</div><div class="line"><a name="l00972"></a><span class="lineno">  972</span>&#160;     );</div><div class="line"><a name="l00973"></a><span class="lineno">  973</span>&#160;</div><div class="line"><a name="l00974"></a><span class="lineno">  974</span>&#160;  <span class="keywordflow">if</span> ( lvectorrt_numInstClusterK[lcidx_selectClusterK] &gt;= 2 ) {</div><div class="line"><a name="l00975"></a><span class="lineno">  975</span>&#160;</div><div class="line"><a name="l00976"></a><span class="lineno">  976</span>&#160;    larraycidx_toMutate = aiochromab_toMutate.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#a4d1d15f6be16c0d0a23824033993aa71">getString</a>();</div><div class="line"><a name="l00977"></a><span class="lineno">  977</span>&#160;    <span class="keywordtype">bool</span> lb_mutOpApp = <span class="keyword">false</span>;</div><div class="line"><a name="l00978"></a><span class="lineno">  978</span>&#160; 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       lb_mutOpApp = <span class="keyword">true</span>;</div><div class="line"><a name="l00985"></a><span class="lineno">  985</span>&#160;      }</div><div class="line"><a name="l00986"></a><span class="lineno">  986</span>&#160;      ++larraycidx_toMutate;</div><div class="line"><a name="l00987"></a><span class="lineno">  987</span>&#160;    }</div><div class="line"><a name="l00988"></a><span class="lineno">  988</span>&#160;</div><div class="line"><a name="l00989"></a><span class="lineno">  989</span>&#160;    aiochromab_toMutate.<a class="code" href="classgaencode_1_1_chromosome_g_g_a.html#a1aa4f8c78e0de3afba730450847ac464">increaseGroupSecSize</a>(); <span class="comment">//Add cluster</span></div><div class="line"><a name="l00990"></a><span class="lineno">  990</span>&#160;    </div><div class="line"><a name="l00991"></a><span class="lineno">  991</span>&#160;  }</div><div class="line"><a name="l00992"></a><span class="lineno">  992</span>&#160;  </div><div class="line"><a name="l00993"></a><span class="lineno">  993</span>&#160;    </div><div class="line"><a name="l00994"></a><span class="lineno">  994</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l00995"></a><span class="lineno">  995</span>&#160;  <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l00996"></a><span class="lineno">  996</span>&#160;    std::cout &lt;&lt; lpc_labelFunc</div><div class="line"><a name="l00997"></a><span class="lineno">  997</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;: OUT(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="stringliteral">&quot;)\n&quot;</span></div><div class="line"><a name="l00998"></a><span class="lineno">  998</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;lcidx_selectClusterK = &quot;</span> &lt;&lt; lcidx_selectClusterK</div><div class="line"><a name="l00999"></a><span class="lineno">  999</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;\tlui_numInstClusterK = &quot;</span> &lt;&lt; lvectorrt_numInstClusterK[lcidx_selectClusterK] &lt;&lt; <span class="charliteral">&#39;\n&#39;</span>;</div><div class="line"><a name="l01000"></a><span class="lineno"> 1000</span>&#160;    aiochromab_toMutate.<a class="code" href="classgaencode_1_1_chromosome_g_g_a.html#a1b069cf9c5179f7aff064081f72aefb6">print</a>(std::cout,lpc_labelFunc);</div><div class="line"><a name="l01001"></a><span class="lineno"> 1001</span>&#160;    std::cout &lt;&lt; std::endl;</div><div class="line"><a name="l01002"></a><span class="lineno"> 1002</span>&#160;   }</div><div class="line"><a name="l01003"></a><span class="lineno"> 1003</span>&#160;  --geiinparam_verbose;</div><div class="line"><a name="l01004"></a><span class="lineno"> 1004</span>&#160;<span class="preprocessor">#endif //__VERBOSE_YES</span></div><div class="line"><a name="l01005"></a><span class="lineno"> 1005</span>&#160;</div><div class="line"><a name="l01006"></a><span class="lineno"> 1006</span>&#160;}  <span class="comment">/*gabinaryop::splittingMutation*/</span></div><div class="line"><a name="l01007"></a><span class="lineno"> 1007</span>&#160;</div><div class="line"><a name="l01008"></a><span class="lineno"> 1008</span>&#160;  </div><div class="line"><a name="l01014"></a><span class="lineno"> 1014</span>&#160;<span class="keyword">template</span> &lt;<span class="keyword">typename</span> T_CLUSTERIDX,</div><div class="line"><a name="l01015"></a><span class="lineno"> 1015</span>&#160;           <span class="keyword">typename</span> T_REAL</div><div class="line"><a name="l01016"></a><span class="lineno"> 1016</span>&#160;           &gt;</div><div class="line"><a name="l01017"></a><span class="lineno"> 1017</span>&#160;<span class="keywordtype">void</span></div><div class="line"><a name="l01018"></a><span class="lineno"> 1018</span>&#160;<a class="code" href="namespacegaclusteringop.html#a53fa1eea7173c38da2ce171f83b0d464">mergeMutation</a></div><div class="line"><a name="l01019"></a><span class="lineno"><a class="line" href="namespacegaclusteringop.html#a53fa1eea7173c38da2ce171f83b0d464"> 1019</a></span>&#160;(<a class="code" href="classgaencode_1_1_chromosome_g_g_a.html">gaencode::ChromosomeGGA&lt;T_CLUSTERIDX,T_REAL&gt;</a> &amp;aiochromab_toMutate)</div><div class="line"><a name="l01020"></a><span class="lineno"> 1020</span>&#160;{</div><div class="line"><a name="l01021"></a><span class="lineno"> 1021</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l01022"></a><span class="lineno"> 1022</span>&#160;  <span class="keyword">const</span> <span class="keywordtype">char</span>* lpc_labelFunc = <span class="stringliteral">&quot;gaclusteringop::mergeMutation&quot;</span>;</div><div class="line"><a name="l01023"></a><span class="lineno"> 1023</span>&#160;  ++geiinparam_verbose;</div><div class="line"><a name="l01024"></a><span class="lineno"> 1024</span>&#160;  <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l01025"></a><span class="lineno"> 1025</span>&#160;    std::cout &lt;&lt; lpc_labelFunc</div><div class="line"><a name="l01026"></a><span class="lineno"> 1026</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;:  IN(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="stringliteral">&quot;)\n&quot;</span>;</div><div class="line"><a name="l01027"></a><span class="lineno"> 1027</span>&#160;    aiochromab_toMutate.<a class="code" href="classgaencode_1_1_chromosome_g_g_a.html#a1b069cf9c5179f7aff064081f72aefb6">print</a>(std::cout,lpc_labelFunc);</div><div class="line"><a name="l01028"></a><span class="lineno"> 1028</span>&#160;    std::cout &lt;&lt; <span class="stringliteral">&quot;\n)&quot;</span></div><div class="line"><a name="l01029"></a><span class="lineno"> 1029</span>&#160;              &lt;&lt; std::endl;</div><div class="line"><a name="l01030"></a><span class="lineno"> 1030</span>&#160;   }</div><div class="line"><a name="l01031"></a><span class="lineno"> 1031</span>&#160;<span class="preprocessor">#endif //__VERBOSE_YES</span></div><div class="line"><a name="l01032"></a><span class="lineno"> 1032</span>&#160;</div><div class="line"><a name="l01033"></a><span class="lineno"> 1033</span>&#160;</div><div class="line"><a name="l01034"></a><span class="lineno"> 1034</span>&#160;  T_CLUSTERIDX lcidx_ktoMutate = aiochromab_toMutate.<a class="code" href="classgaencode_1_1_chromosome_g_g_a.html#aad4d008731eebf9615ad62aa884cc518">getNumClusterK</a>();</div><div class="line"><a name="l01035"></a><span class="lineno"> 1035</span>&#160;  std::pair&lt;T_CLUSTERIDX,T_CLUSTERIDX&gt; lpaircidx_mergeK</div><div class="line"><a name="l01036"></a><span class="lineno"> 1036</span>&#160;    (<a class="code" href="clustering__common_8hpp.html#a24b99685a442a97eb2ae902d09fb8f88">UNKNOWN_CLUSTER_IDX</a>,<a class="code" href="clustering__common_8hpp.html#a24b99685a442a97eb2ae902d09fb8f88">UNKNOWN_CLUSTER_IDX</a>);</div><div class="line"><a name="l01037"></a><span class="lineno"> 1037</span>&#160;  </div><div class="line"><a name="l01038"></a><span class="lineno"> 1038</span>&#160;  <span class="keywordflow">if</span> ( lcidx_ktoMutate &gt; 2 ) {</div><div class="line"><a name="l01039"></a><span class="lineno"> 1039</span>&#160;    std::vector&lt;uintidx&gt; lvectorrt_numInstClusterK(lcidx_ktoMutate,0);</div><div class="line"><a name="l01040"></a><span class="lineno"> 1040</span>&#160;    T_CLUSTERIDX *larraycidx_toMutate = aiochromab_toMutate.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#a4d1d15f6be16c0d0a23824033993aa71">getString</a>();</div><div class="line"><a name="l01041"></a><span class="lineno"> 1041</span>&#160;    <span class="keywordflow">for</span> (<a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a> lui_i = 0; lui_i &lt; aiochromab_toMutate.<a class="code" href="classgaencode_1_1_chromosome_g_g_a.html#acf107792536ef822d20bed243aa89160">getElementSize</a>(); lui_i++) {</div><div class="line"><a name="l01042"></a><span class="lineno"> 1042</span>&#160;      ++lvectorrt_numInstClusterK.at(*larraycidx_toMutate);</div><div class="line"><a name="l01043"></a><span class="lineno"> 1043</span>&#160;      ++larraycidx_toMutate;</div><div class="line"><a name="l01044"></a><span class="lineno"> 1044</span>&#160;    }</div><div class="line"><a name="l01045"></a><span class="lineno"> 1045</span>&#160;</div><div class="line"><a name="l01046"></a><span class="lineno"> 1046</span>&#160;    <span class="keyword">const</span> std::vector&lt;T_REAL&gt;&amp;&amp; lvectorprob_selectBySizeClusterK =</div><div class="line"><a name="l01047"></a><span class="lineno"> 1047</span>&#160;      <a class="code" href="namespaceprob.html#aa737d76e6416a765f004cd211eff712d">prob::makeDistRouletteWheel</a></div><div class="line"><a name="l01048"></a><span class="lineno"> 1048</span>&#160;      (lvectorrt_numInstClusterK.begin(),lvectorrt_numInstClusterK.end(),</div><div class="line"><a name="l01049"></a><span class="lineno"> 1049</span>&#160;       [](<span class="keyword">const</span> <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>&amp; lui_numInstClusterK) -&gt; T_REAL</div><div class="line"><a name="l01050"></a><span class="lineno"> 1050</span>&#160;       {</div><div class="line"><a name="l01051"></a><span class="lineno"> 1051</span>&#160;         <span class="keywordflow">return</span> T_REAL(1.0) / T_REAL(lui_numInstClusterK);</div><div class="line"><a name="l01052"></a><span class="lineno"> 1052</span>&#160;       }</div><div class="line"><a name="l01053"></a><span class="lineno"> 1053</span>&#160;       );</div><div class="line"><a name="l01054"></a><span class="lineno"> 1054</span>&#160;</div><div class="line"><a name="l01055"></a><span class="lineno"> 1055</span>&#160;    std::pair&lt;uintidx,uintidx&gt; lpair_mergeIdxK =   </div><div class="line"><a name="l01056"></a><span class="lineno"> 1056</span>&#160;      <a class="code" href="namespaceprob.html#a9c4a6edf88cebc3b48d1cdf7d2f23e6e">prob::getIdxPairUnlikeRoulette</a></div><div class="line"><a name="l01057"></a><span class="lineno"> 1057</span>&#160;      (lvectorprob_selectBySizeClusterK, </div><div class="line"><a name="l01058"></a><span class="lineno"> 1058</span>&#160;       <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>(0)</div><div class="line"><a name="l01059"></a><span class="lineno"> 1059</span>&#160;       );</div><div class="line"><a name="l01060"></a><span class="lineno"> 1060</span>&#160;     </div><div class="line"><a name="l01061"></a><span class="lineno"> 1061</span>&#160;    <span class="keywordflow">if</span> (lpair_mergeIdxK.second &lt; lpair_mergeIdxK.first) {</div><div class="line"><a name="l01062"></a><span class="lineno"> 1062</span>&#160;        <a class="code" href="namespaceinterfacesse.html#afaa45a2a27710ea2dfa979289cf4961d">std::swap</a>(lpair_mergeIdxK.second,lpair_mergeIdxK.first);</div><div class="line"><a name="l01063"></a><span class="lineno"> 1063</span>&#160;    }</div><div class="line"><a name="l01064"></a><span class="lineno"> 1064</span>&#160;</div><div class="line"><a name="l01065"></a><span class="lineno"> 1065</span>&#160;    lpaircidx_mergeK.first  = (T_CLUSTERIDX) lpair_mergeIdxK.first;</div><div class="line"><a name="l01066"></a><span class="lineno"> 1066</span>&#160;    lpaircidx_mergeK.second = (T_CLUSTERIDX) lpair_mergeIdxK.second;</div><div class="line"><a name="l01067"></a><span class="lineno"> 1067</span>&#160;    </div><div class="line"><a name="l01068"></a><span class="lineno"> 1068</span>&#160;    T_CLUSTERIDX *larraycidx_chromMerge  = aiochromab_toMutate.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#a4d1d15f6be16c0d0a23824033993aa71">getString</a>();</div><div class="line"><a name="l01069"></a><span class="lineno"> 1069</span>&#160;    <span class="keywordflow">for</span> (<a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a> lui_i = 0; lui_i &lt; aiochromab_toMutate.<a class="code" href="classgaencode_1_1_chromosome_g_g_a.html#acf107792536ef822d20bed243aa89160">getElementSize</a>(); lui_i++) {</div><div class="line"><a name="l01070"></a><span class="lineno"> 1070</span>&#160;      <span class="keywordflow">if</span> ( *larraycidx_chromMerge == lpaircidx_mergeK.second ) {</div><div class="line"><a name="l01071"></a><span class="lineno"> 1071</span>&#160;        *larraycidx_chromMerge = lpaircidx_mergeK.first;</div><div class="line"><a name="l01072"></a><span class="lineno"> 1072</span>&#160;      }</div><div class="line"><a name="l01073"></a><span class="lineno"> 1073</span>&#160;      <span class="keywordflow">else</span> <span class="keywordflow">if</span> ( *larraycidx_chromMerge &gt; lpaircidx_mergeK.second ) {</div><div class="line"><a name="l01074"></a><span class="lineno"> 1074</span>&#160;        --(*larraycidx_chromMerge);</div><div class="line"><a name="l01075"></a><span class="lineno"> 1075</span>&#160;      }</div><div class="line"><a name="l01076"></a><span class="lineno"> 1076</span>&#160;      ++larraycidx_chromMerge;</div><div class="line"><a name="l01077"></a><span class="lineno"> 1077</span>&#160;    }</div><div class="line"><a name="l01078"></a><span class="lineno"> 1078</span>&#160;</div><div class="line"><a name="l01079"></a><span class="lineno"> 1079</span>&#160;    aiochromab_toMutate.<a class="code" href="classgaencode_1_1_chromosome_g_g_a.html#a846cdec17d362c23f8c7aa71ebc397c2">decrementGroupSecSize</a>(1);</div><div class="line"><a name="l01080"></a><span class="lineno"> 1080</span>&#160;    </div><div class="line"><a name="l01081"></a><span class="lineno"> 1081</span>&#160;  }</div><div class="line"><a name="l01082"></a><span class="lineno"> 1082</span>&#160;</div><div class="line"><a name="l01083"></a><span class="lineno"> 1083</span>&#160; </div><div class="line"><a name="l01084"></a><span class="lineno"> 1084</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l01085"></a><span class="lineno"> 1085</span>&#160;  <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l01086"></a><span class="lineno"> 1086</span>&#160;    std::cout &lt;&lt; lpc_labelFunc</div><div class="line"><a name="l01087"></a><span class="lineno"> 1087</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;: OUT(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="stringliteral">&quot;) &quot;</span></div><div class="line"><a name="l01088"></a><span class="lineno"> 1088</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;pair_mergeIdxK: &quot;</span> &lt;&lt; lpaircidx_mergeK.first</div><div class="line"><a name="l01089"></a><span class="lineno"> 1089</span>&#160;              &lt;&lt; <span class="stringliteral">&quot; and &quot;</span> &lt;&lt; lpaircidx_mergeK.second</div><div class="line"><a name="l01090"></a><span class="lineno"> 1090</span>&#160;              &lt;&lt; <span class="charliteral">&#39;\n&#39;</span>;</div><div class="line"><a name="l01091"></a><span class="lineno"> 1091</span>&#160;    aiochromab_toMutate.<a class="code" href="classgaencode_1_1_chromosome_g_g_a.html#a1b069cf9c5179f7aff064081f72aefb6">print</a>(std::cout,lpc_labelFunc);</div><div class="line"><a name="l01092"></a><span class="lineno"> 1092</span>&#160;    std::cout &lt;&lt; std::endl;</div><div class="line"><a name="l01093"></a><span class="lineno"> 1093</span>&#160;   }</div><div class="line"><a name="l01094"></a><span class="lineno"> 1094</span>&#160;  --geiinparam_verbose;</div><div class="line"><a name="l01095"></a><span class="lineno"> 1095</span>&#160;<span class="preprocessor">#endif //__VERBOSE_YES</span></div><div class="line"><a name="l01096"></a><span class="lineno"> 1096</span>&#160;  </div><div class="line"><a name="l01097"></a><span class="lineno"> 1097</span>&#160;} <span class="comment">//mutationMergingAgustin2012</span></div><div class="line"><a name="l01098"></a><span class="lineno"> 1098</span>&#160;</div><div class="line"><a name="l01099"></a><span class="lineno"> 1099</span>&#160;</div><div class="line"><a name="l01115"></a><span class="lineno"> 1115</span>&#160;<span class="keyword">template</span> &lt;<span class="keyword">typename</span> T_FEATURE,</div><div class="line"><a name="l01116"></a><span class="lineno"> 1116</span>&#160;          <span class="keyword">typename</span> T_REAL</div><div class="line"><a name="l01117"></a><span class="lineno"> 1117</span>&#160;          &gt; </div><div class="line"><a name="l01118"></a><span class="lineno"> 1118</span>&#160;<span class="keywordtype">void</span> </div><div class="line"><a name="l01119"></a><span class="lineno"> 1119</span>&#160;<a class="code" href="namespacegaclusteringop.html#aaa952213684dbb755ec6d44b3c783f60">randomMutation</a></div><div class="line"><a name="l01120"></a><span class="lineno"><a class="line" href="namespacegaclusteringop.html#aaa952213684dbb755ec6d44b3c783f60"> 1120</a></span>&#160;(<a class="code" href="classgaencode_1_1_chromosome_matrix_with_row_null.html">gaencode::ChromosomeMatrixWithRowNull</a></div><div class="line"><a name="l01121"></a><span class="lineno"> 1121</span>&#160; &lt;T_FEATURE,T_REAL&gt;&amp;                    aiochromatrixwrn_toMutate)</div><div class="line"><a name="l01122"></a><span class="lineno"> 1122</span>&#160;{</div><div class="line"><a name="l01123"></a><span class="lineno"> 1123</span>&#160;</div><div class="line"><a name="l01124"></a><span class="lineno"> 1124</span>&#160;  <span class="keyword">static</span> std::uniform_real_distribution&lt;T_REAL&gt; lsuniformdis_real01(0.0,1.0);</div><div class="line"><a name="l01125"></a><span class="lineno"> 1125</span>&#160;  <span class="keyword">const</span> T_REAL lrt_sign2delta = 2.0 * ((lsuniformdis_real01(<a class="code" href="ga__clustering__operator_8hpp.html#acee5944d570f2fb7efdf1d4c801b30fb">gmt19937_eng</a>) &lt; 0.5)?1.0:-1.0) * lsuniformdis_real01(<a class="code" href="ga__clustering__operator_8hpp.html#acee5944d570f2fb7efdf1d4c801b30fb">gmt19937_eng</a>);</div><div class="line"><a name="l01126"></a><span class="lineno"> 1126</span>&#160;</div><div class="line"><a name="l01127"></a><span class="lineno"> 1127</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l01128"></a><span class="lineno"> 1128</span>&#160;  <span class="keyword">const</span> <span class="keywordtype">char</span>* lpc_labelFunc = <span class="stringliteral">&quot;gaclusteringop::randomMutation&quot;</span>;</div><div class="line"><a name="l01129"></a><span class="lineno"> 1129</span>&#160;  ++geiinparam_verbose;</div><div class="line"><a name="l01130"></a><span class="lineno"> 1130</span>&#160;  <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l01131"></a><span class="lineno"> 1131</span>&#160;    std::cout</div><div class="line"><a name="l01132"></a><span class="lineno"> 1132</span>&#160;      &lt;&lt; lpc_labelFunc</div><div class="line"><a name="l01133"></a><span class="lineno"> 1133</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;:  IN(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="stringliteral">&quot;)\n&quot;</span></div><div class="line"><a name="l01134"></a><span class="lineno"> 1134</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;(output gaencode::Chromosomemat::MatrixWithRowNull&lt;&gt;&amp;: aiochromatrixwrn_toMutate[&quot;</span></div><div class="line"><a name="l01135"></a><span class="lineno"> 1135</span>&#160;              &lt;&lt; &amp;aiochromatrixwrn_toMutate &lt;&lt; <span class="stringliteral">&quot;]\n&quot;</span></div><div class="line"><a name="l01136"></a><span class="lineno"> 1136</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;lrt_sign2delta =  &quot;</span> &lt;&lt;  lrt_sign2delta</div><div class="line"><a name="l01137"></a><span class="lineno"> 1137</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;\n)&quot;</span></div><div class="line"><a name="l01138"></a><span class="lineno"> 1138</span>&#160;              &lt;&lt; std::endl;</div><div class="line"><a name="l01139"></a><span class="lineno"> 1139</span>&#160;  }</div><div class="line"><a name="l01140"></a><span class="lineno"> 1140</span>&#160;<span class="preprocessor">#endif //__VERBOSE_YES</span></div><div class="line"><a name="l01141"></a><span class="lineno"> 1141</span>&#160;</div><div class="line"><a name="l01142"></a><span class="lineno"> 1142</span>&#160;  <span class="keywordflow">for</span> ( <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a> lst_i = 0; lst_i &lt; aiochromatrixwrn_toMutate.getNumRowsMax(); ++lst_i) {</div><div class="line"><a name="l01143"></a><span class="lineno"> 1143</span>&#160;</div><div class="line"><a name="l01144"></a><span class="lineno"> 1144</span>&#160;    T_FEATURE *larrayt_string  = aiochromatrixwrn_toMutate.getRow(lst_i);</div><div class="line"><a name="l01145"></a><span class="lineno"> 1145</span>&#160; </div><div class="line"><a name="l01146"></a><span class="lineno"> 1146</span>&#160;    <span class="keywordflow">if</span> ( larrayt_string != NULL) {</div><div class="line"><a name="l01147"></a><span class="lineno"> 1147</span>&#160;</div><div class="line"><a name="l01148"></a><span class="lineno"> 1148</span>&#160;      <span class="keywordflow">for</span> ( <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a> lst_j = 0; lst_j &lt; aiochromatrixwrn_toMutate.getNumColumns(); ++lst_j) {</div><div class="line"><a name="l01149"></a><span class="lineno"> 1149</span>&#160;            </div><div class="line"><a name="l01150"></a><span class="lineno"> 1150</span>&#160;<span class="preprocessor">#if  DATATYPE_CENTROIDS_ROUND == 0</span></div><div class="line"><a name="l01151"></a><span class="lineno"> 1151</span>&#160; </div><div class="line"><a name="l01152"></a><span class="lineno"> 1152</span>&#160;        larrayt_string[lst_j] = ( larrayt_string[lst_j] != 0.0)?</div><div class="line"><a name="l01153"></a><span class="lineno"> 1153</span>&#160;          larrayt_string[lst_j]  * ( 1.0  + lrt_sign2delta )</div><div class="line"><a name="l01154"></a><span class="lineno"> 1154</span>&#160;          :lrt_sign2delta;</div><div class="line"><a name="l01155"></a><span class="lineno"> 1155</span>&#160;</div><div class="line"><a name="l01156"></a><span class="lineno"> 1156</span>&#160;<span class="preprocessor">#else</span></div><div class="line"><a name="l01157"></a><span class="lineno"> 1157</span>&#160;</div><div class="line"><a name="l01158"></a><span class="lineno"> 1158</span>&#160;        larrayt_string[lst_j] = ( larrayt_string[lst_j] != 0)?</div><div class="line"><a name="l01159"></a><span class="lineno"> 1159</span>&#160;          T_FEATURE( std::round((<a class="code" href="datatype__instance__integer_8hpp.html#a54011d8dea2721bfe1dfbb12eb861fc8">DATATYPE_REAL</a>) larrayt_string[lst_j]  * ( 1.0  +  lrt_sign2delta)))</div><div class="line"><a name="l01160"></a><span class="lineno"> 1160</span>&#160;          :T_FEATURE(std::round((<a class="code" href="datatype__instance__integer_8hpp.html#a54011d8dea2721bfe1dfbb12eb861fc8">DATATYPE_REAL</a>) lrt_sign2delta));</div><div class="line"><a name="l01161"></a><span class="lineno"> 1161</span>&#160;</div><div class="line"><a name="l01162"></a><span class="lineno"> 1162</span>&#160;<span class="preprocessor">#endif //DATATYPE_CENTROIDS_ROUND</span></div><div class="line"><a name="l01163"></a><span class="lineno"> 1163</span>&#160;      }</div><div class="line"><a name="l01164"></a><span class="lineno"> 1164</span>&#160;    }</div><div class="line"><a name="l01165"></a><span class="lineno"> 1165</span>&#160;  }</div><div class="line"><a name="l01166"></a><span class="lineno"> 1166</span>&#160;</div><div class="line"><a name="l01167"></a><span class="lineno"> 1167</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l01168"></a><span class="lineno"> 1168</span>&#160;  <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l01169"></a><span class="lineno"> 1169</span>&#160;    std::cout &lt;&lt; lpc_labelFunc</div><div class="line"><a name="l01170"></a><span class="lineno"> 1170</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;: OUT(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="stringliteral">&quot;)\n&quot;</span></div><div class="line"><a name="l01171"></a><span class="lineno"> 1171</span>&#160;              &lt;&lt; aiochromatrixwrn_toMutate</div><div class="line"><a name="l01172"></a><span class="lineno"> 1172</span>&#160;              &lt;&lt; std::endl;</div><div class="line"><a name="l01173"></a><span class="lineno"> 1173</span>&#160;  }</div><div class="line"><a name="l01174"></a><span class="lineno"> 1174</span>&#160;<span class="preprocessor">#endif //__VERBOSE_YES</span></div><div class="line"><a name="l01175"></a><span class="lineno"> 1175</span>&#160;  </div><div class="line"><a name="l01176"></a><span class="lineno"> 1176</span>&#160;}</div><div class="line"><a name="l01177"></a><span class="lineno"> 1177</span>&#160;</div><div class="line"><a name="l01178"></a><span class="lineno"> 1178</span>&#160;  </div><div class="line"><a name="l01204"></a><span class="lineno"> 1204</span>&#160;<span class="keyword">template</span> &lt;<span class="keyword">typename</span> T_GENE, </div><div class="line"><a name="l01205"></a><span class="lineno"> 1205</span>&#160;          <span class="keyword">typename</span> T_METRIC</div><div class="line"><a name="l01206"></a><span class="lineno"> 1206</span>&#160;         &gt;</div><div class="line"><a name="l01207"></a><span class="lineno"> 1207</span>&#160;<span class="keywordtype">void</span> </div><div class="line"><a name="l01208"></a><span class="lineno"> 1208</span>&#160;<a class="code" href="namespacegaclusteringop.html#abf115dc68f58f8d8fdb72e7c679766c3">biDirectionHMutation</a></div><div class="line"><a name="l01209"></a><span class="lineno"><a class="line" href="namespacegaclusteringop.html#abf115dc68f58f8d8fdb72e7c679766c3"> 1209</a></span>&#160;(<a class="code" href="classgaencode_1_1_chromosome_string.html">gaencode::ChromosomeString&lt;T_GENE,T_METRIC&gt;</a>  &amp;aiochromstr_toMutate,</div><div class="line"><a name="l01210"></a><span class="lineno"> 1210</span>&#160; <span class="keyword">const</span> T_METRIC                               airt_minObjetiveFunc,</div><div class="line"><a name="l01211"></a><span class="lineno"> 1211</span>&#160; <span class="keyword">const</span> T_METRIC                               airt_maxObjetiveFunc,</div><div class="line"><a name="l01212"></a><span class="lineno"> 1212</span>&#160; <span class="keyword">const</span> T_GENE*                                aiarrayt_minFeatures,</div><div class="line"><a name="l01213"></a><span class="lineno"> 1213</span>&#160; <span class="keyword">const</span> T_GENE*                                aiarrayt_maxFeatures</div><div class="line"><a name="l01214"></a><span class="lineno"> 1214</span>&#160; )</div><div class="line"><a name="l01215"></a><span class="lineno"> 1215</span>&#160;{ <span class="comment">//BEGIN biDirectionHMutation</span></div><div class="line"><a name="l01216"></a><span class="lineno"> 1216</span>&#160;</div><div class="line"><a name="l01217"></a><span class="lineno"> 1217</span>&#160;  <span class="keyword">const</span> <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a> lconstui_numClusterK =</div><div class="line"><a name="l01218"></a><span class="lineno"> 1218</span>&#160;    aiochromstr_toMutate.<a class="code" href="classgaencode_1_1_chromosome_string.html#a53164831ecb42560c000f529dcccf4c6">getStringSize</a>() / <a class="code" href="classdata_1_1_instance.html#a90d1eaeb66cc1470bbfdb95434fdb761">data::Instance&lt;T_GENE&gt;::getNumDimensions</a>();</div><div class="line"><a name="l01219"></a><span class="lineno"> 1219</span>&#160;    </div><div class="line"><a name="l01220"></a><span class="lineno"> 1220</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l01221"></a><span class="lineno"> 1221</span>&#160;  <span class="keyword">const</span> <span class="keywordtype">char</span>* lpc_labelFunc = <span class="stringliteral">&quot;gaclusteringop::biDirectionHMutation&quot;</span>;</div><div class="line"><a name="l01222"></a><span class="lineno"> 1222</span>&#160;  ++geiinparam_verbose;</div><div class="line"><a name="l01223"></a><span class="lineno"> 1223</span>&#160;  <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l01224"></a><span class="lineno"> 1224</span>&#160;    std::cout &lt;&lt; lpc_labelFunc </div><div class="line"><a name="l01225"></a><span class="lineno"> 1225</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;:  IN(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="charliteral">&#39;)&#39;</span></div><div class="line"><a name="l01226"></a><span class="lineno"> 1226</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;\n(output gaencode::Chromosome: &amp;aiochromstr_toMutate[&quot;</span> </div><div class="line"><a name="l01227"></a><span class="lineno"> 1227</span>&#160;              &lt;&lt; &amp;aiochromstr_toMutate &lt;&lt; <span class="stringliteral">&quot;]\n&quot;</span>;</div><div class="line"><a name="l01228"></a><span class="lineno"> 1228</span>&#160;    std::ostringstream lostrstream_labelChromCentroids;</div><div class="line"><a name="l01229"></a><span class="lineno"> 1229</span>&#160;    lostrstream_labelChromCentroids &lt;&lt; lpc_labelFunc &lt;&lt; <span class="stringliteral">&quot;:inout aiochromstr_toMutate&quot;</span>;</div><div class="line"><a name="l01230"></a><span class="lineno"> 1230</span>&#160;    aiochromstr_toMutate.<a class="code" href="classgaencode_1_1_chromosome_base.html#ab7a374a062ba8b5c6b4e674bae9a8299">print</a>(std::cout,lostrstream_labelChromCentroids.str().c_str());</div><div class="line"><a name="l01231"></a><span class="lineno"> 1231</span>&#160;    std::cout &lt;&lt; <span class="charliteral">&#39;\n&#39;</span>;</div><div class="line"><a name="l01232"></a><span class="lineno"> 1232</span>&#160;    std::cout &lt;&lt; <span class="stringliteral">&quot;input  M = &quot;</span> &lt;&lt; aiochromstr_toMutate.getObjetiveFunc()</div><div class="line"><a name="l01233"></a><span class="lineno"> 1233</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;\tairt_minObjetiveFunc = &quot;</span> &lt;&lt; airt_minObjetiveFunc</div><div class="line"><a name="l01234"></a><span class="lineno"> 1234</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;\tairt_maxObjetiveFunc = &quot;</span> &lt;&lt; airt_maxObjetiveFunc</div><div class="line"><a name="l01235"></a><span class="lineno"> 1235</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;\tlconstui_numClusterK = &quot;</span> &lt;&lt; lconstui_numClusterK</div><div class="line"><a name="l01236"></a><span class="lineno"> 1236</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;\n)&quot;</span></div><div class="line"><a name="l01237"></a><span class="lineno"> 1237</span>&#160;              &lt;&lt; std::endl;</div><div class="line"><a name="l01238"></a><span class="lineno"> 1238</span>&#160;  }</div><div class="line"><a name="l01239"></a><span class="lineno"> 1239</span>&#160;<span class="preprocessor">#endif //__VERBOSE_YES</span></div><div class="line"><a name="l01240"></a><span class="lineno"> 1240</span>&#160;     </div><div class="line"><a name="l01241"></a><span class="lineno"> 1241</span>&#160;<span class="preprocessor">#if  DATATYPE_CENTROIDS_ROUND == 0</span></div><div class="line"><a name="l01242"></a><span class="lineno"> 1242</span>&#160;    </div><div class="line"><a name="l01243"></a><span class="lineno"> 1243</span>&#160;  T_GENE  lrt_R;</div><div class="line"><a name="l01244"></a><span class="lineno"> 1244</span>&#160;  T_GENE  lrt_delta;</div><div class="line"><a name="l01245"></a><span class="lineno"> 1245</span>&#160;</div><div class="line"><a name="l01246"></a><span class="lineno"> 1246</span>&#160;  lrt_R     =  (airt_maxObjetiveFunc != airt_minObjetiveFunc)? </div><div class="line"><a name="l01247"></a><span class="lineno"> 1247</span>&#160;    (aiochromstr_toMutate.<a class="code" href="classgaencode_1_1_chromosome_base.html#afc3f7dbd72d88157ba37eb8bea29478e">getObjetiveFunc</a>() - airt_minObjetiveFunc) </div><div class="line"><a name="l01248"></a><span class="lineno"> 1248</span>&#160;    / (airt_maxObjetiveFunc - airt_minObjetiveFunc)</div><div class="line"><a name="l01249"></a><span class="lineno"> 1249</span>&#160;    :1.0;</div><div class="line"><a name="l01250"></a><span class="lineno"> 1250</span>&#160;  std::uniform_real_distribution&lt;T_GENE&gt; uniformdis_deltaRR(-lrt_R, lrt_R);</div><div class="line"><a name="l01251"></a><span class="lineno"> 1251</span>&#160;  lrt_delta = uniformdis_deltaRR(<a class="code" href="ga__clustering__operator_8hpp.html#acee5944d570f2fb7efdf1d4c801b30fb">gmt19937_eng</a>);</div><div class="line"><a name="l01252"></a><span class="lineno"> 1252</span>&#160;</div><div class="line"><a name="l01253"></a><span class="lineno"> 1253</span>&#160;  <span class="keywordflow">if</span> (lrt_delta &gt;= 0.0) {</div><div class="line"><a name="l01254"></a><span class="lineno"> 1254</span>&#160;</div><div class="line"><a name="l01255"></a><span class="lineno"> 1255</span>&#160;    <a class="code" href="namespaceinterfacesse.html#ace6b5b44901bf38644ed492778c620f5">interfacesse::aasxpa</a></div><div class="line"><a name="l01256"></a><span class="lineno"> 1256</span>&#160;      (-lrt_delta,</div><div class="line"><a name="l01257"></a><span class="lineno"> 1257</span>&#160;       aiochromstr_toMutate.<a class="code" href="classgaencode_1_1_chromosome_string.html#a95cc85a28caac393e63c98c6c1f3cde2">getString</a>(),</div><div class="line"><a name="l01258"></a><span class="lineno"> 1258</span>&#160;       lconstui_numClusterK,</div><div class="line"><a name="l01259"></a><span class="lineno"> 1259</span>&#160;       <a class="code" href="classdata_1_1_instance.html#a90d1eaeb66cc1470bbfdb95434fdb761">data::Instance&lt;T_GENE&gt;::getNumDimensions</a>(),</div><div class="line"><a name="l01260"></a><span class="lineno"> 1260</span>&#160;       aiarrayt_maxFeatures</div><div class="line"><a name="l01261"></a><span class="lineno"> 1261</span>&#160;       );</div><div class="line"><a name="l01262"></a><span class="lineno"> 1262</span>&#160;</div><div class="line"><a name="l01263"></a><span class="lineno"> 1263</span>&#160;  }</div><div class="line"><a name="l01264"></a><span class="lineno"> 1264</span>&#160;  <span class="keywordflow">else</span> {</div><div class="line"><a name="l01265"></a><span class="lineno"> 1265</span>&#160;</div><div class="line"><a name="l01266"></a><span class="lineno"> 1266</span>&#160;    <a class="code" href="namespaceinterfacesse.html#ace6b5b44901bf38644ed492778c620f5">interfacesse::aasxpa</a></div><div class="line"><a name="l01267"></a><span class="lineno"> 1267</span>&#160;      (lrt_delta,</div><div class="line"><a name="l01268"></a><span class="lineno"> 1268</span>&#160;       aiochromstr_toMutate.<a class="code" href="classgaencode_1_1_chromosome_string.html#a95cc85a28caac393e63c98c6c1f3cde2">getString</a>(),</div><div class="line"><a name="l01269"></a><span class="lineno"> 1269</span>&#160;       lconstui_numClusterK,</div><div class="line"><a name="l01270"></a><span class="lineno"> 1270</span>&#160;       <a class="code" href="classdata_1_1_instance.html#a90d1eaeb66cc1470bbfdb95434fdb761">data::Instance&lt;T_GENE&gt;::getNumDimensions</a>(),</div><div class="line"><a name="l01271"></a><span class="lineno"> 1271</span>&#160;       aiarrayt_minFeatures</div><div class="line"><a name="l01272"></a><span class="lineno"> 1272</span>&#160;       );</div><div class="line"><a name="l01273"></a><span class="lineno"> 1273</span>&#160;  }</div><div class="line"><a name="l01274"></a><span class="lineno"> 1274</span>&#160;</div><div class="line"><a name="l01275"></a><span class="lineno"> 1275</span>&#160;<span class="preprocessor">#else //DATATYPE_CENTROIDS_ROUND</span></div><div class="line"><a name="l01276"></a><span class="lineno"> 1276</span>&#160;</div><div class="line"><a name="l01277"></a><span class="lineno"> 1277</span>&#160;  <a class="code" href="datatype__instance__integer_8hpp.html#a54011d8dea2721bfe1dfbb12eb861fc8">DATATYPE_REAL</a>  lrt_R;</div><div class="line"><a name="l01278"></a><span class="lineno"> 1278</span>&#160;  <a class="code" href="datatype__instance__integer_8hpp.html#a54011d8dea2721bfe1dfbb12eb861fc8">DATATYPE_REAL</a>  lrt_delta;</div><div class="line"><a name="l01279"></a><span class="lineno"> 1279</span>&#160;</div><div class="line"><a name="l01280"></a><span class="lineno"> 1280</span>&#160;  lrt_R     = (airt_maxObjetiveFunc != airt_minObjetiveFunc)? </div><div class="line"><a name="l01281"></a><span class="lineno"> 1281</span>&#160;    (aiochromstr_toMutate.<a class="code" href="classgaencode_1_1_chromosome_base.html#afc3f7dbd72d88157ba37eb8bea29478e">getObjetiveFunc</a>() - airt_minObjetiveFunc) </div><div class="line"><a name="l01282"></a><span class="lineno"> 1282</span>&#160;    / (airt_maxObjetiveFunc - airt_minObjetiveFunc)</div><div class="line"><a name="l01283"></a><span class="lineno"> 1283</span>&#160;    :1.0;</div><div class="line"><a name="l01284"></a><span class="lineno"> 1284</span>&#160;  std::uniform_real_distribution&lt;DATATYPE_REAL&gt; uniformdis_deltaRR(-lrt_R, lrt_R);</div><div class="line"><a name="l01285"></a><span class="lineno"> 1285</span>&#160;  lrt_delta = uniformdis_deltaRR(<a class="code" href="ga__clustering__operator_8hpp.html#acee5944d570f2fb7efdf1d4c801b30fb">gmt19937_eng</a>);</div><div class="line"><a name="l01286"></a><span class="lineno"> 1286</span>&#160;  </div><div class="line"><a name="l01287"></a><span class="lineno"> 1287</span>&#160;</div><div class="line"><a name="l01288"></a><span class="lineno"> 1288</span>&#160;  T_GENE* lchromstr_toMutate = aiochromstr_toMutate.<a class="code" href="classgaencode_1_1_chromosome_string.html#a95cc85a28caac393e63c98c6c1f3cde2">getString</a>();</div><div class="line"><a name="l01289"></a><span class="lineno"> 1289</span>&#160;  </div><div class="line"><a name="l01290"></a><span class="lineno"> 1290</span>&#160;  <span class="keywordflow">if</span> (lrt_delta &gt;= 0.0) {</div><div class="line"><a name="l01291"></a><span class="lineno"> 1291</span>&#160;</div><div class="line"><a name="l01292"></a><span class="lineno"> 1292</span>&#160;      <span class="keywordflow">for</span> ( <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a> liu_i = 0; liu_i &lt; lconstui_numClusterK; ++liu_i) {</div><div class="line"><a name="l01293"></a><span class="lineno"> 1293</span>&#160;        </div><div class="line"><a name="l01294"></a><span class="lineno"> 1294</span>&#160;        <a class="code" href="namespaceinterfacesse.html#a0569818171fd8f88efe5d7f86e6e0b5d">interfacesse::aysxpy</a></div><div class="line"><a name="l01295"></a><span class="lineno"> 1295</span>&#160;          (lchromstr_toMutate,</div><div class="line"><a name="l01296"></a><span class="lineno"> 1296</span>&#160;           -lrt_delta,</div><div class="line"><a name="l01297"></a><span class="lineno"> 1297</span>&#160;           aiarrayt_maxFeatures,</div><div class="line"><a name="l01298"></a><span class="lineno"> 1298</span>&#160;           <a class="code" href="classdata_1_1_instance.html">data::Instance&lt;T_GENE&gt;::getNumDimensions</a>()</div><div class="line"><a name="l01299"></a><span class="lineno"> 1299</span>&#160;           );</div><div class="line"><a name="l01300"></a><span class="lineno"> 1300</span>&#160;        lchromstr_toMutate +=  <a class="code" href="classdata_1_1_instance.html#a90d1eaeb66cc1470bbfdb95434fdb761">data::Instance&lt;T_GENE&gt;::getNumDimensions</a>();</div><div class="line"><a name="l01301"></a><span class="lineno"> 1301</span>&#160;        </div><div class="line"><a name="l01302"></a><span class="lineno"> 1302</span>&#160;      }</div><div class="line"><a name="l01303"></a><span class="lineno"> 1303</span>&#160;</div><div class="line"><a name="l01304"></a><span class="lineno"> 1304</span>&#160;  }</div><div class="line"><a name="l01305"></a><span class="lineno"> 1305</span>&#160;  <span class="keywordflow">else</span> {</div><div class="line"><a name="l01306"></a><span class="lineno"> 1306</span>&#160;</div><div class="line"><a name="l01307"></a><span class="lineno"> 1307</span>&#160;    <span class="keywordflow">for</span> ( <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a> liu_i = 0; liu_i &lt; lconstui_numClusterK; ++liu_i) {</div><div class="line"><a name="l01308"></a><span class="lineno"> 1308</span>&#160;        </div><div class="line"><a name="l01309"></a><span class="lineno"> 1309</span>&#160;        <a class="code" href="namespaceinterfacesse.html#a0569818171fd8f88efe5d7f86e6e0b5d">interfacesse::aysxpy</a></div><div class="line"><a name="l01310"></a><span class="lineno"> 1310</span>&#160;          (lchromstr_toMutate,</div><div class="line"><a name="l01311"></a><span class="lineno"> 1311</span>&#160;           lrt_delta,</div><div class="line"><a name="l01312"></a><span class="lineno"> 1312</span>&#160;           aiarrayt_minFeatures,</div><div class="line"><a name="l01313"></a><span class="lineno"> 1313</span>&#160;           <a class="code" href="classdata_1_1_instance.html">data::Instance&lt;T_GENE&gt;::getNumDimensions</a>()</div><div class="line"><a name="l01314"></a><span class="lineno"> 1314</span>&#160;           );</div><div class="line"><a name="l01315"></a><span class="lineno"> 1315</span>&#160;        </div><div class="line"><a name="l01316"></a><span class="lineno"> 1316</span>&#160;        lchromstr_toMutate +=  <a class="code" href="classdata_1_1_instance.html#a90d1eaeb66cc1470bbfdb95434fdb761">data::Instance&lt;T_GENE&gt;::getNumDimensions</a>();</div><div class="line"><a name="l01317"></a><span class="lineno"> 1317</span>&#160;        </div><div class="line"><a name="l01318"></a><span class="lineno"> 1318</span>&#160;    }</div><div class="line"><a name="l01319"></a><span class="lineno"> 1319</span>&#160;    </div><div class="line"><a name="l01320"></a><span class="lineno"> 1320</span>&#160;  }</div><div class="line"><a name="l01321"></a><span class="lineno"> 1321</span>&#160;</div><div class="line"><a name="l01322"></a><span class="lineno"> 1322</span>&#160;<span class="preprocessor">#endif //DATATYPE_CENTROIDS_ROUND  </span></div><div class="line"><a name="l01323"></a><span class="lineno"> 1323</span>&#160;</div><div class="line"><a name="l01324"></a><span class="lineno"> 1324</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l01325"></a><span class="lineno"> 1325</span>&#160;  <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l01326"></a><span class="lineno"> 1326</span>&#160;    std::cout &lt;&lt; lpc_labelFunc</div><div class="line"><a name="l01327"></a><span class="lineno"> 1327</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;: OUT(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="charliteral">&#39;)&#39;</span></div><div class="line"><a name="l01328"></a><span class="lineno"> 1328</span>&#160;              &lt;&lt;  <span class="stringliteral">&quot;\tR = &quot;</span> &lt;&lt;  lrt_R &lt;&lt; <span class="stringliteral">&quot;\tdelta = &quot;</span> &lt;&lt; lrt_delta &lt;&lt;<span class="charliteral">&#39;\n&#39;</span>;</div><div class="line"><a name="l01329"></a><span class="lineno"> 1329</span>&#160;    aiochromstr_toMutate.<a class="code" href="classgaencode_1_1_chromosome_base.html#ab7a374a062ba8b5c6b4e674bae9a8299">print</a>(std::cout,lpc_labelFunc,<span class="charliteral">&#39;,&#39;</span>,<span class="charliteral">&#39;;&#39;</span>);</div><div class="line"><a name="l01330"></a><span class="lineno"> 1330</span>&#160;    std::cout &lt;&lt; std::endl;</div><div class="line"><a name="l01331"></a><span class="lineno"> 1331</span>&#160;  }</div><div class="line"><a name="l01332"></a><span class="lineno"> 1332</span>&#160;  --geiinparam_verbose;</div><div class="line"><a name="l01333"></a><span class="lineno"> 1333</span>&#160;<span class="preprocessor">#endif //__VERBOSE_YES</span></div><div class="line"><a name="l01334"></a><span class="lineno"> 1334</span>&#160;</div><div class="line"><a name="l01335"></a><span class="lineno"> 1335</span>&#160;} <span class="comment">//END mutationChromosomeBandyMaulik2002</span></div><div class="line"><a name="l01336"></a><span class="lineno"> 1336</span>&#160;</div><div class="line"><a name="l01337"></a><span class="lineno"> 1337</span>&#160;  </div><div class="line"><a name="l01338"></a><span class="lineno"> 1338</span>&#160;</div><div class="line"><a name="l01353"></a><span class="lineno"> 1353</span>&#160;<span class="keyword">template</span> &lt;<span class="keyword">typename</span> T_FEATURE,</div><div class="line"><a name="l01354"></a><span class="lineno"> 1354</span>&#160;          <span class="keyword">typename</span> T_REAL</div><div class="line"><a name="l01355"></a><span class="lineno"> 1355</span>&#160;          &gt;</div><div class="line"><a name="l01356"></a><span class="lineno"> 1356</span>&#160;<span class="keywordtype">void</span></div><div class="line"><a name="l01357"></a><span class="lineno"> 1357</span>&#160;</div><div class="line"><a name="l01358"></a><span class="lineno"> 1358</span>&#160;<a class="code" href="namespacegaclusteringop.html#aefe966c20e6bd3d44f0621349782cb91">biDirectionMutation</a></div><div class="line"><a name="l01359"></a><span class="lineno"><a class="line" href="namespacegaclusteringop.html#aefe966c20e6bd3d44f0621349782cb91"> 1359</a></span>&#160;(<a class="code" href="classgaencode_1_1_chromosome_string.html">gaencode::ChromosomeString&lt;T_FEATURE,T_REAL&gt;</a>&amp; aiochromstr_toMutate,</div><div class="line"><a name="l01360"></a><span class="lineno"> 1360</span>&#160; <span class="keyword">const</span> T_FEATURE                               *aiarrayt_minFeatures,</div><div class="line"><a name="l01361"></a><span class="lineno"> 1361</span>&#160; <span class="keyword">const</span> T_FEATURE                               *aiarrayt_maxFeatures</div><div class="line"><a name="l01362"></a><span class="lineno"> 1362</span>&#160; )</div><div class="line"><a name="l01363"></a><span class="lineno"> 1363</span>&#160;{ <span class="comment">//BEGIN biDirectionMutation</span></div><div class="line"><a name="l01364"></a><span class="lineno"> 1364</span>&#160;     </div><div class="line"><a name="l01365"></a><span class="lineno"> 1365</span>&#160;  <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>  lcidx_numRows = </div><div class="line"><a name="l01366"></a><span class="lineno"> 1366</span>&#160;    (aiochromstr_toMutate.<a class="code" href="classgaencode_1_1_chromosome_string.html#a53164831ecb42560c000f529dcccf4c6">getStringSize</a>() / <a class="code" href="classdata_1_1_instance.html#a90d1eaeb66cc1470bbfdb95434fdb761">data::Instance&lt;T_FEATURE&gt;::getNumDimensions</a>());</div><div class="line"><a name="l01367"></a><span class="lineno"> 1367</span>&#160;    </div><div class="line"><a name="l01368"></a><span class="lineno"> 1368</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l01369"></a><span class="lineno"> 1369</span>&#160;    <span class="keyword">const</span> <span class="keywordtype">char</span>* lpc_labelFunc = <span class="stringliteral">&quot;gaclusteringop::biDirectionMutation&quot;</span>;</div><div class="line"><a name="l01370"></a><span class="lineno"> 1370</span>&#160;  ++geiinparam_verbose;</div><div class="line"><a name="l01371"></a><span class="lineno"> 1371</span>&#160;  <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l01372"></a><span class="lineno"> 1372</span>&#160;    std::cout &lt;&lt; lpc_labelFunc </div><div class="line"><a name="l01373"></a><span class="lineno"> 1373</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;:  IN(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="stringliteral">&quot;)\n&quot;</span></div><div class="line"><a name="l01374"></a><span class="lineno"> 1374</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;(output gaencode::Chromosome: &amp;aiochromstr_toMutate[&quot;</span> </div><div class="line"><a name="l01375"></a><span class="lineno"> 1375</span>&#160;              &lt;&lt; &amp;aiochromstr_toMutate &lt;&lt; <span class="stringliteral">&quot;]\n&quot;</span></div><div class="line"><a name="l01376"></a><span class="lineno"> 1376</span>&#160;              &lt;&lt; <span class="stringliteral">&quot; input lcidx_numRows = &quot;</span> </div><div class="line"><a name="l01377"></a><span class="lineno"> 1377</span>&#160;              &lt;&lt; lcidx_numRows</div><div class="line"><a name="l01378"></a><span class="lineno"> 1378</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;\n)&quot;</span></div><div class="line"><a name="l01379"></a><span class="lineno"> 1379</span>&#160;              &lt;&lt; std::endl; </div><div class="line"><a name="l01380"></a><span class="lineno"> 1380</span>&#160;  }</div><div class="line"><a name="l01381"></a><span class="lineno"> 1381</span>&#160;<span class="preprocessor">#endif //__VERBOSE_YES</span></div><div class="line"><a name="l01382"></a><span class="lineno"> 1382</span>&#160;</div><div class="line"><a name="l01383"></a><span class="lineno"> 1383</span>&#160;  <span class="keyword">static</span> std::uniform_real_distribution&lt;T_REAL&gt; lsuniformdis_real11(-1.0,1.0);</div><div class="line"><a name="l01384"></a><span class="lineno"> 1384</span>&#160;</div><div class="line"><a name="l01385"></a><span class="lineno"> 1385</span>&#160;  T_FEATURE *lrt_gene = aiochromstr_toMutate.<a class="code" href="classgaencode_1_1_chromosome_string.html#a95cc85a28caac393e63c98c6c1f3cde2">getString</a>();</div><div class="line"><a name="l01386"></a><span class="lineno"> 1386</span>&#160;  </div><div class="line"><a name="l01387"></a><span class="lineno"> 1387</span>&#160;<span class="preprocessor">#if  DATATYPE_CENTROIDS_ROUND == 0</span></div><div class="line"><a name="l01388"></a><span class="lineno"> 1388</span>&#160;  </div><div class="line"><a name="l01389"></a><span class="lineno"> 1389</span>&#160;  <span class="keywordflow">for</span> ( <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a> liu_i = 0; liu_i &lt; lcidx_numRows; ++liu_i) {</div><div class="line"><a name="l01390"></a><span class="lineno"> 1390</span>&#160;</div><div class="line"><a name="l01391"></a><span class="lineno"> 1391</span>&#160;    <span class="keywordflow">for</span> ( <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a> liu_j = 0; liu_j &lt; data::Instance&lt;T_FEATURE&gt;::getNumDimensions(); ++liu_j) {</div><div class="line"><a name="l01392"></a><span class="lineno"> 1392</span>&#160;</div><div class="line"><a name="l01393"></a><span class="lineno"> 1393</span>&#160;      T_REAL lrt_delta = lsuniformdis_real11(<a class="code" href="ga__clustering__operator_8hpp.html#acee5944d570f2fb7efdf1d4c801b30fb">gmt19937_eng</a>);</div><div class="line"><a name="l01394"></a><span class="lineno"> 1394</span>&#160;</div><div class="line"><a name="l01395"></a><span class="lineno"> 1395</span>&#160; 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   </div><div class="line"><a name="l01405"></a><span class="lineno"> 1405</span>&#160;  }</div><div class="line"><a name="l01406"></a><span class="lineno"> 1406</span>&#160;</div><div class="line"><a name="l01407"></a><span class="lineno"> 1407</span>&#160;<span class="preprocessor">#else //DATATYPE_CENTROIDS_ROUND</span></div><div class="line"><a name="l01408"></a><span class="lineno"> 1408</span>&#160;</div><div class="line"><a name="l01409"></a><span class="lineno"> 1409</span>&#160;   <span class="keywordflow">for</span> ( <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a> liu_i = 0; liu_i &lt; lcidx_numRows; ++liu_i) {</div><div class="line"><a name="l01410"></a><span class="lineno"> 1410</span>&#160;</div><div class="line"><a name="l01411"></a><span class="lineno"> 1411</span>&#160;    <span class="keywordflow">for</span> ( <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a> liu_j = 0; liu_j &lt; data::Instance&lt;T_FEATURE&gt;::getNumDimensions(); 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       *lrt_gene += T_FEATURE(std::round(lrt_delta * (T_REAL)(*lrt_gene -  aiarrayt_minFeatures[liu_j])));</div><div class="line"><a name="l01420"></a><span class="lineno"> 1420</span>&#160;      }</div><div class="line"><a name="l01421"></a><span class="lineno"> 1421</span>&#160;      </div><div class="line"><a name="l01422"></a><span class="lineno"> 1422</span>&#160;      ++lrt_gene;</div><div class="line"><a name="l01423"></a><span class="lineno"> 1423</span>&#160;    }</div><div class="line"><a name="l01424"></a><span class="lineno"> 1424</span>&#160;    </div><div class="line"><a name="l01425"></a><span class="lineno"> 1425</span>&#160;  }</div><div class="line"><a name="l01426"></a><span class="lineno"> 1426</span>&#160;</div><div class="line"><a name="l01427"></a><span class="lineno"> 1427</span>&#160;<span class="preprocessor">#endif //DATATYPE_CENTROIDS_ROUND  </span></div><div class="line"><a name="l01428"></a><span class="lineno"> 1428</span>&#160;</div><div class="line"><a name="l01429"></a><span class="lineno"> 1429</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l01430"></a><span class="lineno"> 1430</span>&#160;  <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l01431"></a><span class="lineno"> 1431</span>&#160;    std::cout &lt;&lt; lpc_labelFunc</div><div class="line"><a name="l01432"></a><span class="lineno"> 1432</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;: OUT(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="stringliteral">&quot;)\n&quot;</span>;</div><div class="line"><a name="l01433"></a><span class="lineno"> 1433</span>&#160;    std::ostringstream lostrstream_labelFunc;</div><div class="line"><a name="l01434"></a><span class="lineno"> 1434</span>&#160;    lostrstream_labelFunc  &lt;&lt; <span class="stringliteral">&quot;&lt;CENTROIDSCLUSTER:&quot;</span> &lt;&lt; geverbosepc_labelstep &lt;&lt; <span class="charliteral">&#39;:&#39;</span> &lt;&lt; lpc_labelFunc; </div><div class="line"><a name="l01435"></a><span class="lineno"> 1435</span>&#160;    aiochromstr_toMutate.<a class="code" href="classgaencode_1_1_chromosome_base.html#ab7a374a062ba8b5c6b4e674bae9a8299">print</a>(std::cout,lostrstream_labelFunc.str().c_str(),<span class="charliteral">&#39;,&#39;</span>,<span class="charliteral">&#39;;&#39;</span>);</div><div class="line"><a name="l01436"></a><span class="lineno"> 1436</span>&#160;    std::cout &lt;&lt; std::endl;</div><div class="line"><a name="l01437"></a><span class="lineno"> 1437</span>&#160;  }</div><div class="line"><a name="l01438"></a><span class="lineno"> 1438</span>&#160;  --geiinparam_verbose;</div><div class="line"><a name="l01439"></a><span class="lineno"> 1439</span>&#160;<span class="preprocessor">#endif //__VERBOSE_YES</span></div><div class="line"><a name="l01440"></a><span class="lineno"> 1440</span>&#160;</div><div class="line"><a name="l01441"></a><span class="lineno"> 1441</span>&#160;} <span class="comment">/*END biDirectionMutation</span></div><div class="line"><a name="l01442"></a><span class="lineno"> 1442</span>&#160;<span class="comment">   */</span></div><div class="line"><a name="l01443"></a><span class="lineno"> 1443</span>&#160;</div><div class="line"><a name="l01444"></a><span class="lineno"> 1444</span>&#160; <span class="comment">/*OTHERE OPERATOR ------------------------------------------------------------------------------</span></div><div class="line"><a name="l01445"></a><span class="lineno"> 1445</span>&#160;<span class="comment">   */</span></div><div class="line"><a name="l01446"></a><span class="lineno"> 1446</span>&#160;</div><div class="line"><a name="l01454"></a><span class="lineno"> 1454</span>&#160;<span class="keyword">template</span> &lt;<span class="keyword">typename</span> T_CENTROIDS,</div><div class="line"><a name="l01455"></a><span class="lineno"> 1455</span>&#160;          <span class="keyword">typename</span> T_REAL</div><div class="line"><a name="l01456"></a><span class="lineno"> 1456</span>&#160;          &gt;   </div><div class="line"><a name="l01457"></a><span class="lineno"> 1457</span>&#160;<span class="keywordtype">bool</span></div><div class="line"><a name="l01458"></a><span class="lineno"> 1458</span>&#160;<a class="code" href="namespacegaclusteringop.html#a68b1581a21d20dc38bb0896acaf380f1">rearrangedCluster</a></div><div class="line"><a name="l01459"></a><span class="lineno"><a class="line" href="namespacegaclusteringop.html#a68b1581a21d20dc38bb0896acaf380f1"> 1459</a></span>&#160;(<a class="code" href="classgaencode_1_1_chromosome_string.html">gaencode::ChromosomeString&lt;T_CENTROIDS,T_REAL&gt;</a> &amp;aochrom_YRearranged,       </div><div class="line"><a name="l01460"></a><span class="lineno"> 1460</span>&#160; <span class="keyword">const</span> <a class="code" href="classmat_1_1_matrix_row.html">mat::MatrixRow&lt;T_CENTROIDS&gt;</a>              &amp;aimatrixrowt_XReferenced,</div><div class="line"><a name="l01461"></a><span class="lineno"> 1461</span>&#160; <span class="keyword">const</span> <a class="code" href="structdist_1_1_dist.html">dist::Dist&lt;T_REAL,T_CENTROIDS&gt;</a>           &amp;aifunc2p_dist</div><div class="line"><a name="l01462"></a><span class="lineno"> 1462</span>&#160; )</div><div class="line"><a name="l01463"></a><span class="lineno"> 1463</span>&#160;{</div><div class="line"><a name="l01464"></a><span class="lineno"> 1464</span>&#160;  <span class="keywordtype">bool</span>      lob_isNeededRearrange;</div><div class="line"><a name="l01465"></a><span class="lineno"> 1465</span>&#160;  <span class="keywordtype">bool</span>      lb_changeRow;</div><div class="line"><a name="l01466"></a><span class="lineno"> 1466</span>&#160;  <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>   luintidx_i, luintidx_j;</div><div class="line"><a name="l01467"></a><span class="lineno"> 1467</span>&#160;  <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>   luintid_minYiXj;</div><div class="line"><a name="l01468"></a><span class="lineno"> 1468</span>&#160;  T_REAL    lrt_distMinYiXj;  </div><div class="line"><a name="l01469"></a><span class="lineno"> 1469</span>&#160;  T_REAL    lrt_distYjXi;</div><div class="line"><a name="l01470"></a><span class="lineno"> 1470</span>&#160;</div><div class="line"><a name="l01471"></a><span class="lineno"> 1471</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l01472"></a><span class="lineno"> 1472</span>&#160;  <span class="keyword">const</span> <span class="keywordtype">char</span>* lpc_labelFunc = <span class="stringliteral">&quot;gaclusteringop::rearrangedClusterGAGR&quot;</span>;</div><div class="line"><a name="l01473"></a><span class="lineno"> 1473</span>&#160;  ++geiinparam_verbose;</div><div class="line"><a name="l01474"></a><span class="lineno"> 1474</span>&#160;  <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l01475"></a><span class="lineno"> 1475</span>&#160;    std::cout &lt;&lt; lpc_labelFunc</div><div class="line"><a name="l01476"></a><span class="lineno"> 1476</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;:  IN(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="stringliteral">&quot;)\n&quot;</span>;</div><div class="line"><a name="l01477"></a><span class="lineno"> 1477</span>&#160;    std::ostringstream lostrstream_labelChrom;</div><div class="line"><a name="l01478"></a><span class="lineno"> 1478</span>&#160;    lostrstream_labelChrom &lt;&lt; <span class="stringliteral">&quot;input:YREARRANGED:&quot;</span> &lt;&lt; lpc_labelFunc;</div><div class="line"><a name="l01479"></a><span class="lineno"> 1479</span>&#160;    aochrom_YRearranged.<a class="code" href="classgaencode_1_1_chromosome_base.html#ab7a374a062ba8b5c6b4e674bae9a8299">print</a>(std::cout,lostrstream_labelChrom.str().c_str());</div><div class="line"><a name="l01480"></a><span class="lineno"> 1480</span>&#160;    std::cout &lt;&lt; <span class="stringliteral">&quot;\n)&quot;</span></div><div class="line"><a name="l01481"></a><span class="lineno"> 1481</span>&#160;              &lt;&lt; std::endl;</div><div class="line"><a name="l01482"></a><span class="lineno"> 1482</span>&#160;  }</div><div class="line"><a name="l01483"></a><span class="lineno"> 1483</span>&#160;<span class="preprocessor">#endif //__VERBOSE_YES</span></div><div class="line"><a name="l01484"></a><span class="lineno"> 1484</span>&#160;</div><div class="line"><a name="l01485"></a><span class="lineno"> 1485</span>&#160;  <a class="code" href="classmat_1_1_bit_array.html">mat::BitArray&lt;unsigned long&gt;</a> lbitarray_p2(aimatrixrowt_XReferenced.<a class="code" href="classmat_1_1_matrix_base.html#ac500eedd5e203327d3292f8ab22d8f3e">getNumRows</a>());</div><div class="line"><a name="l01486"></a><span class="lineno"> 1486</span>&#160;</div><div class="line"><a name="l01487"></a><span class="lineno"> 1487</span>&#160;</div><div class="line"><a name="l01488"></a><span class="lineno"> 1488</span>&#160;  <span class="comment">/*DECODE CHROMOSOME*/</span></div><div class="line"><a name="l01489"></a><span class="lineno"> 1489</span>&#160;  <a class="code" href="classmat_1_1_matrix_row.html">mat::MatrixRow&lt;T_CENTROIDS&gt;</a> </div><div class="line"><a name="l01490"></a><span class="lineno"> 1490</span>&#160;    lmatrixrowt_YRearranged</div><div class="line"><a name="l01491"></a><span class="lineno"> 1491</span>&#160;    (aimatrixrowt_XReferenced.<a class="code" href="classmat_1_1_matrix_base.html#ac500eedd5e203327d3292f8ab22d8f3e">getNumRows</a>(),</div><div class="line"><a name="l01492"></a><span class="lineno"> 1492</span>&#160;     <a class="code" href="classdata_1_1_instance.html#a90d1eaeb66cc1470bbfdb95434fdb761">data::Instance&lt;T_CENTROIDS&gt;::getNumDimensions</a>(),</div><div class="line"><a name="l01493"></a><span class="lineno"> 1493</span>&#160;     aochrom_YRearranged.<a class="code" href="classgaencode_1_1_chromosome_string.html#a95cc85a28caac393e63c98c6c1f3cde2">getString</a>()</div><div class="line"><a name="l01494"></a><span class="lineno"> 1494</span>&#160;     );</div><div class="line"><a name="l01495"></a><span class="lineno"> 1495</span>&#160;</div><div class="line"><a name="l01496"></a><span class="lineno"> 1496</span>&#160;  lrt_distMinYiXj = 0.0;</div><div class="line"><a name="l01497"></a><span class="lineno"> 1497</span>&#160;  </div><div class="line"><a name="l01498"></a><span class="lineno"> 1498</span>&#160;  lbitarray_p2.<a class="code" href="classmat_1_1_matrix_row.html#a1070fba1c0ec0fbaa309f141817be412">initialize</a>();</div><div class="line"><a name="l01499"></a><span class="lineno"> 1499</span>&#160;</div><div class="line"><a name="l01500"></a><span class="lineno"> 1500</span>&#160;  lob_isNeededRearrange = <span class="keyword">false</span>;</div><div class="line"><a name="l01501"></a><span class="lineno"> 1501</span>&#160;  luintid_minYiXj = 0;</div><div class="line"><a name="l01502"></a><span class="lineno"> 1502</span>&#160;  luintidx_i = 0;</div><div class="line"><a name="l01503"></a><span class="lineno"> 1503</span>&#160;  <span class="keywordflow">while</span> (luintidx_i &lt; lmatrixrowt_YRearranged.getNumRows()) {</div><div class="line"><a name="l01504"></a><span class="lineno"> 1504</span>&#160;    <span class="keywordflow">if</span> (!lbitarray_p2.getBit(luintidx_i)) {</div><div class="line"><a name="l01505"></a><span class="lineno"> 1505</span>&#160;      luintidx_j = 0;</div><div class="line"><a name="l01506"></a><span class="lineno"> 1506</span>&#160;      lb_changeRow = <span class="keyword">false</span>;</div><div class="line"><a name="l01507"></a><span class="lineno"> 1507</span>&#160;      <span class="keywordflow">while</span> ( lbitarray_p2.getBit(luintidx_j) &amp;&amp; (luintidx_j &lt; lmatrixrowt_YRearranged.getNumRows()) )</div><div class="line"><a name="l01508"></a><span class="lineno"> 1508</span>&#160;        ++luintidx_j;</div><div class="line"><a name="l01509"></a><span class="lineno"> 1509</span>&#160;      <span class="keywordflow">if</span>  ( luintidx_j &lt; lmatrixrowt_YRearranged.getNumRows() ) {</div><div class="line"><a name="l01510"></a><span class="lineno"> 1510</span>&#160;        </div><div class="line"><a name="l01511"></a><span class="lineno"> 1511</span>&#160;        lrt_distMinYiXj = </div><div class="line"><a name="l01512"></a><span class="lineno"> 1512</span>&#160;          aifunc2p_dist</div><div class="line"><a name="l01513"></a><span class="lineno"> 1513</span>&#160;          (lmatrixrowt_YRearranged.getRow(luintidx_i), </div><div class="line"><a name="l01514"></a><span class="lineno"> 1514</span>&#160;           aimatrixrowt_XReferenced.<a class="code" href="classmat_1_1_matrix_row.html#a5391a205367fbaac82a26ddc377a80af">getRow</a>(luintidx_j), </div><div class="line"><a name="l01515"></a><span class="lineno"> 1515</span>&#160;           aimatrixrowt_XReferenced.<a class="code" href="classmat_1_1_matrix_base.html#a70200414022ce1479b9ddc16102b12ae">getNumColumns</a>()</div><div class="line"><a name="l01516"></a><span class="lineno"> 1516</span>&#160;           ); </div><div class="line"><a name="l01517"></a><span class="lineno"> 1517</span>&#160;        luintid_minYiXj = luintidx_j;</div><div class="line"><a name="l01518"></a><span class="lineno"> 1518</span>&#160;        lb_changeRow  = <span class="keyword">true</span>;</div><div class="line"><a name="l01519"></a><span class="lineno"> 1519</span>&#160;      }</div><div class="line"><a name="l01520"></a><span class="lineno"> 1520</span>&#160;      <span class="keywordflow">for</span> (luintidx_j = luintidx_j +1;</div><div class="line"><a name="l01521"></a><span class="lineno"> 1521</span>&#160;           luintidx_j &lt; lmatrixrowt_YRearranged.getNumRows();</div><div class="line"><a name="l01522"></a><span class="lineno"> 1522</span>&#160;           luintidx_j++)</div><div class="line"><a name="l01523"></a><span class="lineno"> 1523</span>&#160;        {  </div><div class="line"><a name="l01524"></a><span class="lineno"> 1524</span>&#160;        <span class="keywordflow">if</span> (!lbitarray_p2.getBit(luintidx_j)) { </div><div class="line"><a name="l01525"></a><span class="lineno"> 1525</span>&#160;          </div><div class="line"><a name="l01526"></a><span class="lineno"> 1526</span>&#160;</div><div class="line"><a name="l01527"></a><span class="lineno"> 1527</span>&#160;          lrt_distYjXi = </div><div class="line"><a name="l01528"></a><span class="lineno"> 1528</span>&#160;            aifunc2p_dist</div><div class="line"><a name="l01529"></a><span class="lineno"> 1529</span>&#160;            (lmatrixrowt_YRearranged.getRow(luintidx_i), </div><div class="line"><a name="l01530"></a><span class="lineno"> 1530</span>&#160;             aimatrixrowt_XReferenced.<a class="code" href="classmat_1_1_matrix_row.html#a5391a205367fbaac82a26ddc377a80af">getRow</a>(luintidx_j), </div><div class="line"><a name="l01531"></a><span class="lineno"> 1531</span>&#160;             aimatrixrowt_XReferenced.<a class="code" href="classmat_1_1_matrix_base.html#a70200414022ce1479b9ddc16102b12ae">getNumColumns</a>()</div><div class="line"><a name="l01532"></a><span class="lineno"> 1532</span>&#160;             );</div><div class="line"><a name="l01533"></a><span class="lineno"> 1533</span>&#160;          <span class="keywordflow">if</span> ( lrt_distYjXi &lt;  lrt_distMinYiXj) {</div><div class="line"><a name="l01534"></a><span class="lineno"> 1534</span>&#160;            lrt_distMinYiXj = lrt_distYjXi;</div><div class="line"><a name="l01535"></a><span class="lineno"> 1535</span>&#160;            luintid_minYiXj  = luintidx_j;</div><div class="line"><a name="l01536"></a><span class="lineno"> 1536</span>&#160;            lb_changeRow   = <span class="keyword">true</span>;</div><div class="line"><a name="l01537"></a><span class="lineno"> 1537</span>&#160;          }</div><div class="line"><a name="l01538"></a><span class="lineno"> 1538</span>&#160;        } </div><div class="line"><a name="l01539"></a><span class="lineno"> 1539</span>&#160;      }</div><div class="line"><a name="l01540"></a><span class="lineno"> 1540</span>&#160;      </div><div class="line"><a name="l01541"></a><span class="lineno"> 1541</span>&#160;      <span class="keywordflow">if</span> ( lb_changeRow &amp;&amp; luintidx_i != luintid_minYiXj) {</div><div class="line"><a name="l01542"></a><span class="lineno"> 1542</span>&#160;        lmatrixrowt_YRearranged.swapRows(luintidx_i,luintid_minYiXj);</div><div class="line"><a name="l01543"></a><span class="lineno"> 1543</span>&#160;        lbitarray_p2.<a class="code" href="classds_1_1_bit_container.html#a4aa7926699744916d577dd1f3da39359">setBit</a>(luintid_minYiXj); <span class="comment">// = true;</span></div><div class="line"><a name="l01544"></a><span class="lineno"> 1544</span>&#160;        lob_isNeededRearrange = <span class="keyword">true</span>;        </div><div class="line"><a name="l01545"></a><span class="lineno"> 1545</span>&#160;        luintidx_i = 0;</div><div class="line"><a name="l01546"></a><span class="lineno"> 1546</span>&#160;      }</div><div class="line"><a name="l01547"></a><span class="lineno"> 1547</span>&#160;    }</div><div class="line"><a name="l01548"></a><span class="lineno"> 1548</span>&#160;    ++luintidx_i;</div><div class="line"><a name="l01549"></a><span class="lineno"> 1549</span>&#160;  } <span class="comment">//WHILE i    </span></div><div class="line"><a name="l01550"></a><span class="lineno"> 1550</span>&#160;</div><div class="line"><a name="l01551"></a><span class="lineno"> 1551</span>&#160;</div><div class="line"><a name="l01552"></a><span class="lineno"> 1552</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l01553"></a><span class="lineno"> 1553</span>&#160;   <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l01554"></a><span class="lineno"> 1554</span>&#160;    std::cout &lt;&lt; lpc_labelFunc</div><div class="line"><a name="l01555"></a><span class="lineno"> 1555</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;: OUT(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="stringliteral">&quot;)\n&quot;</span>;</div><div class="line"><a name="l01556"></a><span class="lineno"> 1556</span>&#160;              </div><div class="line"><a name="l01557"></a><span class="lineno"> 1557</span>&#160;    std::ostringstream lostrstream_labelChrom;</div><div class="line"><a name="l01558"></a><span class="lineno"> 1558</span>&#160;    lostrstream_labelChrom &lt;&lt; <span class="stringliteral">&quot;output:YREARRANGED:NeededRearrange:&quot;</span> &lt;&lt; lob_isNeededRearrange </div><div class="line"><a name="l01559"></a><span class="lineno"> 1559</span>&#160;                           &lt;&lt;  <span class="charliteral">&#39;:&#39;</span> &lt;&lt; lpc_labelFunc;</div><div class="line"><a name="l01560"></a><span class="lineno"> 1560</span>&#160;    aochrom_YRearranged.<a class="code" href="classgaencode_1_1_chromosome_base.html#ab7a374a062ba8b5c6b4e674bae9a8299">print</a>(std::cout,lostrstream_labelChrom.str().c_str());</div><div class="line"><a name="l01561"></a><span class="lineno"> 1561</span>&#160;    std::cout &lt;&lt; std::endl;</div><div class="line"><a name="l01562"></a><span class="lineno"> 1562</span>&#160;  }</div><div class="line"><a name="l01563"></a><span class="lineno"> 1563</span>&#160;  --geiinparam_verbose;</div><div class="line"><a name="l01564"></a><span class="lineno"> 1564</span>&#160;<span class="preprocessor">#endif //__VERBOSE_YES</span></div><div class="line"><a name="l01565"></a><span class="lineno"> 1565</span>&#160;  </div><div class="line"><a name="l01566"></a><span class="lineno"> 1566</span>&#160;  <span class="keywordflow">return</span> lob_isNeededRearrange;</div><div class="line"><a name="l01567"></a><span class="lineno"> 1567</span>&#160;}</div><div class="line"><a name="l01568"></a><span class="lineno"> 1568</span>&#160;</div><div class="line"><a name="l01569"></a><span class="lineno"> 1569</span>&#160;  </div><div class="line"><a name="l01580"></a><span class="lineno"> 1580</span>&#160;<span class="keyword">template</span> &lt;<span class="keyword">typename</span>  T_CLUSTERIDX,</div><div class="line"><a name="l01581"></a><span class="lineno"> 1581</span>&#160;           <span class="keyword">typename</span> T_REAL,</div><div class="line"><a name="l01582"></a><span class="lineno"> 1582</span>&#160;           <span class="keyword">typename</span> T_FEATURE,</div><div class="line"><a name="l01583"></a><span class="lineno"> 1583</span>&#160;           <span class="keyword">typename</span> T_INSTANCES_CLUSTER_K,</div><div class="line"><a name="l01584"></a><span class="lineno"> 1584</span>&#160;           <span class="keyword">typename</span> T_FEATURE_SUM,</div><div class="line"><a name="l01585"></a><span class="lineno"> 1585</span>&#160;          <span class="keyword">typename</span> T_COMMON_IDOMAIN,</div><div class="line"><a name="l01586"></a><span class="lineno"> 1586</span>&#160;           <span class="keyword">typename</span> INPUT_ITERATOR</div><div class="line"><a name="l01587"></a><span class="lineno"> 1587</span>&#160;           &gt; </div><div class="line"><a name="l01588"></a><span class="lineno"> 1588</span>&#160;<span class="keywordtype">void</span></div><div class="line"><a name="l01589"></a><span class="lineno"> 1589</span>&#160;<a class="code" href="namespacegaclusteringop.html#a394e5de28006937d308d2659683c2cc6">kmeansfeac</a></div><div class="line"><a name="l01590"></a><span class="lineno"><a class="line" href="namespacegaclusteringop.html#a394e5de28006937d308d2659683c2cc6"> 1590</a></span>&#160;(<a class="code" href="classgaencode_1_1_chromosome_f_e_a_c.html">gaencode::ChromosomeFEAC</a></div><div class="line"><a name="l01591"></a><span class="lineno"> 1591</span>&#160; &lt;T_CLUSTERIDX,</div><div class="line"><a name="l01592"></a><span class="lineno"> 1592</span>&#160;  T_REAL,</div><div class="line"><a name="l01593"></a><span class="lineno"> 1593</span>&#160;  T_FEATURE,</div><div class="line"><a name="l01594"></a><span class="lineno"> 1594</span>&#160;  T_FEATURE_SUM,</div><div class="line"><a name="l01595"></a><span class="lineno"> 1595</span>&#160;  T_INSTANCES_CLUSTER_K&gt;             &amp;aochrom_feac,</div><div class="line"><a name="l01596"></a><span class="lineno"> 1596</span>&#160; INPUT_ITERATOR                      aiiterator_instfirst,</div><div class="line"><a name="l01597"></a><span class="lineno"> 1597</span>&#160; <span class="keyword">const</span> INPUT_ITERATOR                aiiterator_instlast,</div><div class="line"><a name="l01598"></a><span class="lineno"> 1598</span>&#160; T_COMMON_IDOMAIN                    aiit_kmeansNumMaxIter,</div><div class="line"><a name="l01599"></a><span class="lineno"> 1599</span>&#160; T_FEATURE                           airt_kmeansMaxDiffCent,</div><div class="line"><a name="l01600"></a><span class="lineno"> 1600</span>&#160; <a class="code" href="structdist_1_1_dist.html">dist::Dist&lt;T_REAL,T_FEATURE&gt;</a>        &amp;aifunc2p_dist</div><div class="line"><a name="l01601"></a><span class="lineno"> 1601</span>&#160; )</div><div class="line"><a name="l01602"></a><span class="lineno"> 1602</span>&#160;{  </div><div class="line"><a name="l01603"></a><span class="lineno"> 1603</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l01604"></a><span class="lineno"> 1604</span>&#160;  <span class="keyword">const</span> <span class="keywordtype">char</span>* lpc_labelFunc = <span class="stringliteral">&quot;gaclusteringop::kmeansfeac&quot;</span>;</div><div class="line"><a name="l01605"></a><span class="lineno"> 1605</span>&#160;  ++geiinparam_verbose;</div><div class="line"><a name="l01606"></a><span class="lineno"> 1606</span>&#160;  <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l01607"></a><span class="lineno"> 1607</span>&#160;    std::cout &lt;&lt; lpc_labelFunc</div><div class="line"><a name="l01608"></a><span class="lineno"> 1608</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;:  IN(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="stringliteral">&quot;)\n&quot;</span>;</div><div class="line"><a name="l01609"></a><span class="lineno"> 1609</span>&#160;    std::ostringstream lostrstream_labelFunc;</div><div class="line"><a name="l01610"></a><span class="lineno"> 1610</span>&#160;    lostrstream_labelFunc  &lt;&lt; geverbosepc_labelstep &lt;&lt; <span class="charliteral">&#39;:&#39;</span> &lt;&lt; lpc_labelFunc; </div><div class="line"><a name="l01611"></a><span class="lineno"> 1611</span>&#160;    aochrom_feac.print(std::cout,lostrstream_labelFunc.str().c_str(),<span class="charliteral">&#39;,&#39;</span>,<span class="charliteral">&#39;;&#39;</span>);</div><div class="line"><a name="l01612"></a><span class="lineno"> 1612</span>&#160;    std::cout &lt;&lt; <span class="stringliteral">&quot;\ninput  aiiterator_instfirst[&quot;</span> &lt;&lt; *aiiterator_instfirst &lt;&lt; <span class="stringliteral">&quot;]\n&quot;</span></div><div class="line"><a name="l01613"></a><span class="lineno"> 1613</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;input const aiiterator_instlast[&quot;</span> &lt;&lt; &amp;aiiterator_instlast &lt;&lt; <span class="stringliteral">&quot;]\n&quot;</span></div><div class="line"><a name="l01614"></a><span class="lineno"> 1614</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;input dist::Dist&lt;T_REAL,T_FEATURE&gt; &amp;aifunc2p_dist[&quot;</span> </div><div class="line"><a name="l01615"></a><span class="lineno"> 1615</span>&#160;              &lt;&lt; &amp;aifunc2p_dist &lt;&lt; <span class="charliteral">&#39;]&#39;</span></div><div class="line"><a name="l01616"></a><span class="lineno"> 1616</span>&#160;              &lt;&lt;  <span class="stringliteral">&quot;\n)&quot;</span></div><div class="line"><a name="l01617"></a><span class="lineno"> 1617</span>&#160;              &lt;&lt; std::endl;</div><div class="line"><a name="l01618"></a><span class="lineno"> 1618</span>&#160;  }</div><div class="line"><a name="l01619"></a><span class="lineno"> 1619</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l01620"></a><span class="lineno"> 1620</span>&#160;</div><div class="line"><a name="l01621"></a><span class="lineno"> 1621</span>&#160;  <a class="code" href="classmat_1_1_matrix_with_row_null.html">mat::MatrixWithRowNull&lt;T_FEATURE&gt;</a>         &amp;lmatrixwrownull_centroids =</div><div class="line"><a name="l01622"></a><span class="lineno"> 1622</span>&#160;    aochrom_feac.getCentroids();</div><div class="line"><a name="l01623"></a><span class="lineno"> 1623</span>&#160;  T_CLUSTERIDX                              *larraycidx_idxMemberShip =</div><div class="line"><a name="l01624"></a><span class="lineno"> 1624</span>&#160;    aochrom_feac.getString();</div><div class="line"><a name="l01625"></a><span class="lineno"> 1625</span>&#160;  std::vector&lt;T_INSTANCES_CLUSTER_K&gt;        &amp;lvectorT_numInstancesClusterK = </div><div class="line"><a name="l01626"></a><span class="lineno"> 1626</span>&#160;    aochrom_feac.getNumInstancesClusterK();</div><div class="line"><a name="l01627"></a><span class="lineno"> 1627</span>&#160;</div><div class="line"><a name="l01628"></a><span class="lineno"> 1628</span>&#160;  T_COMMON_IDOMAIN liT_newIteration = 1;</div><div class="line"><a name="l01629"></a><span class="lineno"> 1629</span>&#160;  <a class="code" href="classmat_1_1_bit_array.html">mat::BitArray&lt;unsigned long&gt;</a> lbitarray_recalculeteK(lmatrixwrownull_centroids.<a class="code" href="classmat_1_1_matrix_base.html#ac500eedd5e203327d3292f8ab22d8f3e">getNumRows</a>());</div><div class="line"><a name="l01630"></a><span class="lineno"> 1630</span>&#160;  T_INSTANCES_CLUSTER_K *larrayt_instacesDiffNumClusterK =</div><div class="line"><a name="l01631"></a><span class="lineno"> 1631</span>&#160;    <span class="keyword">new</span> T_INSTANCES_CLUSTER_K[lmatrixwrownull_centroids.<a class="code" href="classmat_1_1_matrix_base.html#ac500eedd5e203327d3292f8ab22d8f3e">getNumRows</a>()];</div><div class="line"><a name="l01632"></a><span class="lineno"> 1632</span>&#160;  </div><div class="line"><a name="l01633"></a><span class="lineno"> 1633</span>&#160;  <a class="code" href="classmat_1_1_matrix_row.html">mat::MatrixRow&lt;T_FEATURE_SUM&gt;</a>       </div><div class="line"><a name="l01634"></a><span class="lineno"> 1634</span>&#160; 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 <span class="keywordflow">while</span> ( liT_newIteration == 1 ) {</div><div class="line"><a name="l01642"></a><span class="lineno"> 1642</span>&#160;</div><div class="line"><a name="l01643"></a><span class="lineno"> 1643</span>&#160;    liT_newIteration = 0;</div><div class="line"><a name="l01644"></a><span class="lineno"> 1644</span>&#160;    </div><div class="line"><a name="l01645"></a><span class="lineno"> 1645</span>&#160;    lbitarray_recalculeteK.<a class="code" href="classmat_1_1_matrix_row.html#a1070fba1c0ec0fbaa309f141817be412">initialize</a>();</div><div class="line"><a name="l01646"></a><span class="lineno"> 1646</span>&#160;</div><div class="line"><a name="l01647"></a><span class="lineno"> 1647</span>&#160;    lmatrixrowt_centroidsDiffSumInsta.initialize();</div><div class="line"><a name="l01648"></a><span class="lineno"> 1648</span>&#160;    </div><div class="line"><a name="l01649"></a><span class="lineno"> 1649</span>&#160;    <a class="code" href="namespaceinterfacesse.html#aa4b94bf2bf8cb7c437fa3feba8b70ff8">interfacesse::copya</a></div><div class="line"><a name="l01650"></a><span class="lineno"> 1650</span>&#160;      (larrayt_instacesDiffNumClusterK,</div><div class="line"><a name="l01651"></a><span class="lineno"> 1651</span>&#160;       T_INSTANCES_CLUSTER_K(0),</div><div class="line"><a name="l01652"></a><span class="lineno"> 1652</span>&#160;       lmatrixwrownull_centroids.<a class="code" href="classmat_1_1_matrix_base.html#ac500eedd5e203327d3292f8ab22d8f3e">getNumRows</a>()</div><div class="line"><a name="l01653"></a><span class="lineno"> 1653</span>&#160;       );</div><div class="line"><a name="l01654"></a><span class="lineno"> 1654</span>&#160;    </div><div class="line"><a name="l01655"></a><span class="lineno"> 1655</span>&#160;    <span class="comment">/*3. Assign each object to the cluster with the nearest centroid;</span></div><div class="line"><a name="l01656"></a><span class="lineno"> 1656</span>&#160;<span class="comment">     */</span></div><div class="line"><a name="l01657"></a><span class="lineno"> 1657</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l01658"></a><span class="lineno"> 1658</span>&#160;  ++geiinparam_verbose;</div><div class="line"><a name="l01659"></a><span class="lineno"> 1659</span>&#160;  <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l01660"></a><span class="lineno"> 1660</span>&#160;    std::cout &lt;&lt; <span class="stringliteral">&quot;KMEANS-FEAC 3. ASSIGN EACH OBJECT TO THE CLUSTER WITH THE NEAREST CENTROID:  IN&quot;</span></div><div class="line"><a name="l01661"></a><span class="lineno"> 1661</span>&#160;              &lt;&lt; <span class="charliteral">&#39;(&#39;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="charliteral">&#39;)&#39;</span></div><div class="line"><a name="l01662"></a><span class="lineno"> 1662</span>&#160;              &lt;&lt; std::endl;</div><div class="line"><a name="l01663"></a><span class="lineno"> 1663</span>&#160;  }</div><div class="line"><a name="l01664"></a><span class="lineno"> 1664</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l01665"></a><span class="lineno"> 1665</span>&#160;</div><div class="line"><a name="l01666"></a><span class="lineno"> 1666</span>&#160;    <a class="code" href="classmat_1_1_matrix_with_row_null.html">mat::MatrixWithRowNull&lt;T_FEATURE&gt;</a> lmatrixwrownullT_oldCentroids(lmatrixwrownull_centroids);</div><div class="line"><a name="l01667"></a><span class="lineno"> 1667</span>&#160; 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 <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l01737"></a><span class="lineno"> 1737</span>&#160;    std::cout &lt;&lt; <span class="stringliteral">&quot;KMEANS-FEAC 3. 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   std::cout &lt;&lt;<span class="charliteral">&#39;\n&#39;</span>;</div><div class="line"><a name="l01743"></a><span class="lineno"> 1743</span>&#160;    std::ostringstream lostrstream_labelinstacesDiffNumClusterK;</div><div class="line"><a name="l01744"></a><span class="lineno"> 1744</span>&#160;    lostrstream_labelinstacesDiffNumClusterK</div><div class="line"><a name="l01745"></a><span class="lineno"> 1745</span>&#160;      &lt;&lt; <span class="stringliteral">&quot;&lt;INSTACESDIFFNUMCLUSTERK:&quot;</span></div><div class="line"><a name="l01746"></a><span class="lineno"> 1746</span>&#160;      &lt;&lt; lpc_labelFunc;</div><div class="line"><a name="l01747"></a><span class="lineno"> 1747</span>&#160;    <a class="code" href="namespaceinout.html#a0c10a45877a347dec0d4ec4e5b05b828">inout::containerprint</a></div><div class="line"><a name="l01748"></a><span class="lineno"> 1748</span>&#160;      (larrayt_instacesDiffNumClusterK,</div><div class="line"><a name="l01749"></a><span class="lineno"> 1749</span>&#160;       larrayt_instacesDiffNumClusterK+ lmatrixwrownull_centroids.<a class="code" href="classmat_1_1_matrix_base.html#ac500eedd5e203327d3292f8ab22d8f3e">getNumRows</a>(),</div><div class="line"><a name="l01750"></a><span class="lineno"> 1750</span>&#160;       std::cout,</div><div class="line"><a name="l01751"></a><span class="lineno"> 1751</span>&#160;       lostrstream_labelinstacesDiffNumClusterK.str().c_str(),</div><div class="line"><a name="l01752"></a><span class="lineno"> 1752</span>&#160;       <span class="charliteral">&#39;,&#39;</span></div><div class="line"><a name="l01753"></a><span class="lineno"> 1753</span>&#160;       );</div><div class="line"><a name="l01754"></a><span class="lineno"> 1754</span>&#160;    std::cout &lt;&lt; std::endl;</div><div class="line"><a name="l01755"></a><span class="lineno"> 1755</span>&#160;  }</div><div class="line"><a name="l01756"></a><span class="lineno"> 1756</span>&#160;  --geiinparam_verbose;</div><div class="line"><a name="l01757"></a><span class="lineno"> 1757</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l01758"></a><span class="lineno"> 1758</span>&#160;  </div><div class="line"><a name="l01759"></a><span class="lineno"> 1759</span>&#160;    <span class="comment">/*for moves between cluster instances</span></div><div class="line"><a name="l01760"></a><span class="lineno"> 1760</span>&#160;<span class="comment">     */</span></div><div class="line"><a name="l01761"></a><span class="lineno"> 1761</span>&#160;    <span class="keywordflow">for</span> (<a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a> lui_j = 0; lui_j &lt; lmatrixwrownull_centroids.<a class="code" href="classmat_1_1_matrix_base.html#ac500eedd5e203327d3292f8ab22d8f3e">getNumRows</a>(); lui_j++) {</div><div class="line"><a name="l01762"></a><span class="lineno"> 1762</span>&#160;</div><div class="line"><a name="l01763"></a><span class="lineno"> 1763</span>&#160;      <span class="keywordflow">if</span> ( lbitarray_recalculeteK.getBit(lui_j) ) {</div><div class="line"><a name="l01764"></a><span class="lineno"> 1764</span>&#160;        </div><div class="line"><a name="l01765"></a><span class="lineno"> 1765</span>&#160; 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</div><div class="line"><a name="l01805"></a><span class="lineno"> 1805</span>&#160;    <span class="comment">/*calculated if another iteration is required</span></div><div class="line"><a name="l01806"></a><span class="lineno"> 1806</span>&#160;<span class="comment">     */</span></div><div class="line"><a name="l01807"></a><span class="lineno"> 1807</span>&#160;    <span class="keywordflow">for</span> ( <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a> lui_j = 0; lui_j &lt; lmatrixwrownull_centroids.<a class="code" href="classmat_1_1_matrix_base.html#ac500eedd5e203327d3292f8ab22d8f3e">getNumRows</a>(); lui_j++) {</div><div class="line"><a name="l01808"></a><span class="lineno"> 1808</span>&#160;      T_FEATURE *larrayrowt_centroidj = lmatrixwrownull_centroids.<a class="code" href="classmat_1_1_matrix_with_row_null.html#ac74d2b769f581b11e7b125d2a8ab3f06">getRow</a>(lui_j); </div><div class="line"><a name="l01809"></a><span class="lineno"> 1809</span>&#160; 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lst_k &lt; lvectorT_numInstancesClusterK.size(); lst_k++) </div><div class="line"><a name="l01835"></a><span class="lineno"> 1835</span>&#160;      <span class="keywordflow">if</span> ( lvectorT_numInstancesClusterK[lst_k] != 0) </div><div class="line"><a name="l01836"></a><span class="lineno"> 1836</span>&#160;        lvectorstidx_clustersKeep.push_back( lst_k );</div><div class="line"><a name="l01837"></a><span class="lineno"> 1837</span>&#160;   </div><div class="line"><a name="l01838"></a><span class="lineno"> 1838</span>&#160;    <a class="code" href="namespacegaintegerop.html#ac5569129f257484a01a32fca9ef280cd">gaintegerop::labelKeep</a></div><div class="line"><a name="l01839"></a><span class="lineno"> 1839</span>&#160;      &lt;T_CLUSTERIDX,T_REAL&gt;</div><div class="line"><a name="l01840"></a><span class="lineno"> 1840</span>&#160;      (aochrom_feac,</div><div class="line"><a name="l01841"></a><span class="lineno"> 1841</span>&#160;       lvectorstidx_clustersKeep</div><div class="line"><a name="l01842"></a><span class="lineno"> 1842</span>&#160;       );</div><div class="line"><a name="l01843"></a><span class="lineno"> 1843</span>&#160;    </div><div class="line"><a name="l01844"></a><span class="lineno"> 1844</span>&#160;    lmatrixwrownull_centroids.<a class="code" href="classmat_1_1_matrix_with_row_null.html#a4e85c7751adcdd38783e163d5592d001">keepRows</a>(lvectorstidx_clustersKeep);</div><div class="line"><a name="l01845"></a><span class="lineno"> 1845</span>&#160;</div><div class="line"><a name="l01846"></a><span class="lineno"> 1846</span>&#160;    lvectorT_numInstancesClusterK =</div><div class="line"><a name="l01847"></a><span class="lineno"> 1847</span>&#160;      <a class="code" href="namespacevectorutils.html#ae3fd429283cdfa733ff31c56e5c2d629">vectorutils::keepItems</a></div><div class="line"><a name="l01848"></a><span class="lineno"> 1848</span>&#160;      &lt;T_INSTANCES_CLUSTER_K&gt;</div><div class="line"><a name="l01849"></a><span class="lineno"> 1849</span>&#160;      (lvectorT_numInstancesClusterK,</div><div class="line"><a name="l01850"></a><span class="lineno"> 1850</span>&#160;       lvectorstidx_clustersKeep</div><div class="line"><a name="l01851"></a><span class="lineno"> 1851</span>&#160;       );</div><div class="line"><a name="l01852"></a><span class="lineno"> 1852</span>&#160;</div><div class="line"><a name="l01853"></a><span class="lineno"> 1853</span>&#160;    std::vector&lt;T_REAL&gt;&amp; lvectorT_genotypePartialFcC =</div><div class="line"><a name="l01854"></a><span class="lineno"> 1854</span>&#160;        aochrom_feac.getPartialFcC();</div><div class="line"><a name="l01855"></a><span class="lineno"> 1855</span>&#160;</div><div class="line"><a name="l01856"></a><span class="lineno"> 1856</span>&#160;    lvectorT_genotypePartialFcC =</div><div class="line"><a name="l01857"></a><span class="lineno"> 1857</span>&#160;      <a class="code" href="namespacevectorutils.html#ae3fd429283cdfa733ff31c56e5c2d629">vectorutils::keepItems</a></div><div class="line"><a name="l01858"></a><span class="lineno"> 1858</span>&#160;      (lvectorT_genotypePartialFcC,</div><div class="line"><a name="l01859"></a><span class="lineno"> 1859</span>&#160;       lvectorstidx_clustersKeep</div><div class="line"><a name="l01860"></a><span class="lineno"> 1860</span>&#160;       );</div><div class="line"><a name="l01861"></a><span class="lineno"> 1861</span>&#160;  }</div><div class="line"><a name="l01862"></a><span class="lineno"> 1862</span>&#160;  </div><div class="line"><a name="l01863"></a><span class="lineno"> 1863</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l01864"></a><span class="lineno"> 1864</span>&#160;  <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l01865"></a><span class="lineno"> 1865</span>&#160;     std::cout &lt;&lt; lpc_labelFunc</div><div class="line"><a name="l01866"></a><span class="lineno"> 1866</span>&#160;               &lt;&lt; <span class="stringliteral">&quot;: OUT(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="stringliteral">&quot;)\n&quot;</span>;</div><div class="line"><a name="l01867"></a><span class="lineno"> 1867</span>&#160;      std::ostringstream lostrstream_labelFunc;</div><div class="line"><a name="l01868"></a><span class="lineno"> 1868</span>&#160;      lostrstream_labelFunc  &lt;&lt; geverbosepc_labelstep &lt;&lt; <span class="charliteral">&#39;:&#39;</span> &lt;&lt; lpc_labelFunc; </div><div class="line"><a name="l01869"></a><span class="lineno"> 1869</span>&#160;      aochrom_feac.print(std::cout,lostrstream_labelFunc.str().c_str(),<span class="charliteral">&#39;,&#39;</span>,<span class="charliteral">&#39;;&#39;</span>);</div><div class="line"><a name="l01870"></a><span class="lineno"> 1870</span>&#160;  }</div><div class="line"><a name="l01871"></a><span class="lineno"> 1871</span>&#160;  --geiinparam_verbose;</div><div class="line"><a name="l01872"></a><span class="lineno"> 1872</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor">  </span></div><div class="line"><a name="l01873"></a><span class="lineno"> 1873</span>&#160;</div><div class="line"><a name="l01874"></a><span class="lineno"> 1874</span>&#160;  <span class="keyword">delete</span>[] larrayt_instacesDiffNumClusterK;</div><div class="line"><a name="l01875"></a><span class="lineno"> 1875</span>&#160;}</div><div class="line"><a name="l01876"></a><span class="lineno"> 1876</span>&#160;</div><div class="line"><a name="l01877"></a><span class="lineno"> 1877</span>&#160;</div><div class="line"><a name="l01889"></a><span class="lineno"> 1889</span>&#160;<span class="keyword">template</span> &lt;<span class="keyword">typename</span> T_CLUSTERIDX,</div><div class="line"><a name="l01890"></a><span class="lineno"> 1890</span>&#160;          <span class="keyword">typename</span> T_REAL,<span class="comment">//DATA TYPE OBJETIVE FUNCTION AND T_FITNESS, </span></div><div class="line"><a name="l01891"></a><span class="lineno"> 1891</span>&#160;          <span class="keyword">typename</span> T_FEATURE,</div><div class="line"><a name="l01892"></a><span class="lineno"> 1892</span>&#160;          <span class="keyword">typename</span> T_INSTANCES_CLUSTER_K,</div><div class="line"><a name="l01893"></a><span class="lineno"> 1893</span>&#160;          <span class="keyword">typename</span> T_FEATURE_SUM,</div><div class="line"><a name="l01894"></a><span class="lineno"> 1894</span>&#160;          <span class="keyword">typename</span> INPUT_ITERATOR</div><div class="line"><a name="l01895"></a><span class="lineno"> 1895</span>&#160;          &gt;</div><div class="line"><a name="l01896"></a><span class="lineno"> 1896</span>&#160;<span class="keywordtype">void</span></div><div class="line"><a name="l01897"></a><span class="lineno"> 1897</span>&#160;<a class="code" href="namespacegaclusteringop.html#a76027f1493ad07ff92bdee8e07d05b15">MO1</a></div><div class="line"><a name="l01898"></a><span class="lineno"><a class="line" href="namespacegaclusteringop.html#a76027f1493ad07ff92bdee8e07d05b15"> 1898</a></span>&#160;(<a class="code" href="classgaencode_1_1_chrom_fixed_length.html">gaencode::ChromFixedLength&lt;T_CLUSTERIDX,T_REAL&gt;</a>   &amp;aiochromfixlen_toMutate,</div><div class="line"><a name="l01899"></a><span class="lineno"> 1899</span>&#160; <a class="code" href="classmat_1_1_matrix_row.html">mat::MatrixRow&lt;T_FEATURE&gt;</a>                         &amp;aomatrixrowt_centroids,</div><div class="line"><a name="l01900"></a><span class="lineno"> 1900</span>&#160; <a class="code" href="classmat_1_1_matrix_row.html">mat::MatrixRow&lt;T_FEATURE_SUM&gt;</a>                     &amp;aomatrixrowt_sumInstCluster,</div><div class="line"><a name="l01901"></a><span class="lineno"> 1901</span>&#160; std::vector&lt;T_INSTANCES_CLUSTER_K&gt;                &amp;aovectort_numInstClusterK,</div><div class="line"><a name="l01902"></a><span class="lineno"> 1902</span>&#160; INPUT_ITERATOR                                    aiiterator_instfirst,</div><div class="line"><a name="l01903"></a><span class="lineno"> 1903</span>&#160; <span class="keyword">const</span> INPUT_ITERATOR                              aiiterator_instlast,</div><div class="line"><a name="l01904"></a><span class="lineno"> 1904</span>&#160; <span class="keyword">const</span> <a class="code" href="structdist_1_1_dist.html">dist::Dist&lt;T_REAL,T_FEATURE&gt;</a>                &amp;aifunc2p_dist</div><div class="line"><a name="l01905"></a><span class="lineno"> 1905</span>&#160; )</div><div class="line"><a name="l01906"></a><span class="lineno"> 1906</span>&#160;{  </div><div class="line"><a name="l01907"></a><span class="lineno"> 1907</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l01908"></a><span class="lineno"> 1908</span>&#160;  <span class="keyword">const</span> <span class="keywordtype">char</span>* lpc_labelFunc = <span class="stringliteral">&quot;gaclusteringop::MO1&quot;</span>;</div><div class="line"><a name="l01909"></a><span class="lineno"> 1909</span>&#160;  ++geiinparam_verbose;</div><div class="line"><a name="l01910"></a><span class="lineno"> 1910</span>&#160;  <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l01911"></a><span class="lineno"> 1911</span>&#160;    std::cout</div><div class="line"><a name="l01912"></a><span class="lineno"> 1912</span>&#160;      &lt;&lt; lpc_labelFunc</div><div class="line"><a name="l01913"></a><span class="lineno"> 1913</span>&#160;      &lt;&lt; <span class="stringliteral">&quot;:  IN(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="charliteral">&#39;)&#39;</span></div><div class="line"><a name="l01914"></a><span class="lineno"> 1914</span>&#160;      &lt;&lt; <span class="stringliteral">&quot; K = &quot;</span></div><div class="line"><a name="l01915"></a><span class="lineno"> 1915</span>&#160;      &lt;&lt; aiochromfixlen_toMutate.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#ab9d0b01b82cd679c6232dcd78c13e9d2">getGene</a></div><div class="line"><a name="l01916"></a><span class="lineno"> 1916</span>&#160;      (<a class="code" href="classgaencode_1_1_chrom_fixed_length.html">gaencode::ChromFixedLength&lt;T_CLUSTERIDX,T_REAL&gt;::stcgetStringSize</a>()-1)</div><div class="line"><a name="l01917"></a><span class="lineno"> 1917</span>&#160;      &lt;&lt; <span class="charliteral">&#39;\n&#39;</span>;</div><div class="line"><a name="l01918"></a><span class="lineno"> 1918</span>&#160;    std::ostringstream lostrstream_labeltoMutate;</div><div class="line"><a name="l01919"></a><span class="lineno"> 1919</span>&#160;    lostrstream_labeltoMutate &lt;&lt; <span class="stringliteral">&quot;IN:&quot;</span> &lt;&lt; lpc_labelFunc &lt;&lt; <span class="stringliteral">&quot;:aiochromfixlen_toMutate:&quot;</span>;</div><div class="line"><a name="l01920"></a><span class="lineno"> 1920</span>&#160;    aiochromfixlen_toMutate.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#a2d0b4e4d46c2f224ce34cf795407b407">print</a>(std::cout,lostrstream_labeltoMutate.str().c_str());</div><div class="line"><a name="l01921"></a><span class="lineno"> 1921</span>&#160;    std::cout</div><div class="line"><a name="l01922"></a><span class="lineno"> 1922</span>&#160;     </div><div class="line"><a name="l01923"></a><span class="lineno"> 1923</span>&#160;      &lt;&lt; <span class="stringliteral">&quot;\n input  dist::Dist&lt;T_REAL,T_FEATURE&gt; &amp;aifunc2p_dist[&quot;</span> &lt;&lt; &amp;aifunc2p_dist &lt;&lt; <span class="charliteral">&#39;]&#39;</span></div><div class="line"><a name="l01924"></a><span class="lineno"> 1924</span>&#160;      &lt;&lt;  <span class="stringliteral">&quot;\n)&quot;</span></div><div class="line"><a name="l01925"></a><span class="lineno"> 1925</span>&#160;      &lt;&lt; std::endl;</div><div class="line"><a name="l01926"></a><span class="lineno"> 1926</span>&#160;  }</div><div class="line"><a name="l01927"></a><span class="lineno"> 1927</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l01928"></a><span class="lineno"> 1928</span>&#160;</div><div class="line"><a name="l01929"></a><span class="lineno"> 1929</span>&#160;  T_CLUSTERIDX lcidx_Cs = T_CLUSTERIDX(<a class="code" href="nearestinstance__operator_8hpp.html#ac6dfec13abcffd9b8f8abd4ad0cf6f11">NEARESTCENTROID_UNKNOWN</a>);</div><div class="line"><a name="l01930"></a><span class="lineno"> 1930</span>&#160;  <span class="keywordflow">if</span> ( aiochromfixlen_toMutate.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#ab9d0b01b82cd679c6232dcd78c13e9d2">getGene</a></div><div class="line"><a name="l01931"></a><span class="lineno"> 1931</span>&#160;       (<a class="code" href="classgaencode_1_1_chrom_fixed_length.html">gaencode::ChromFixedLength&lt;T_CLUSTERIDX,T_REAL&gt;::stcgetStringSize</a>()-1) &gt; 2</div><div class="line"><a name="l01932"></a><span class="lineno"> 1932</span>&#160;       )</div><div class="line"><a name="l01933"></a><span class="lineno"> 1933</span>&#160;    {</div><div class="line"><a name="l01934"></a><span class="lineno"> 1934</span>&#160;</div><div class="line"><a name="l01935"></a><span class="lineno"> 1935</span>&#160;    <span class="comment">/*1.2.1 Randomly choose a cluster Cs encoded into g //</span></div><div class="line"><a name="l01936"></a><span class="lineno"> 1936</span>&#160;<span class="comment">     */</span></div><div class="line"><a name="l01937"></a><span class="lineno"> 1937</span>&#160;      </div><div class="line"><a name="l01938"></a><span class="lineno"> 1938</span>&#160;    std::uniform_int_distribution&lt;T_CLUSTERIDX&gt; uniformdis_cidx_0K1</div><div class="line"><a name="l01939"></a><span class="lineno"> 1939</span>&#160;      (0,aiochromfixlen_toMutate.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#ab9d0b01b82cd679c6232dcd78c13e9d2">getGene</a>(<a class="code" href="classgaencode_1_1_chrom_fixed_length.html">gaencode::ChromFixedLength&lt;T_CLUSTERIDX,T_REAL&gt;::stcgetStringSize</a>()-1)-1);</div><div class="line"><a name="l01940"></a><span class="lineno"> 1940</span>&#160;</div><div class="line"><a name="l01941"></a><span class="lineno"> 1941</span>&#160;    lcidx_Cs = uniformdis_cidx_0K1(<a class="code" href="ga__clustering__operator_8hpp.html#acee5944d570f2fb7efdf1d4c801b30fb">gmt19937_eng</a>);</div><div class="line"><a name="l01942"></a><span class="lineno"> 1942</span>&#160;</div><div class="line"><a name="l01943"></a><span class="lineno"> 1943</span>&#160;    <span class="comment">//Relabel genotype</span></div><div class="line"><a name="l01944"></a><span class="lineno"> 1944</span>&#160;    <span class="keywordflow">for</span> ( <span class="keyword">auto</span> liter_gene = aiochromfixlen_toMutate.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#af29275f1369d5ba7ca30da4831a528db">begin</a>();</div><div class="line"><a name="l01945"></a><span class="lineno"> 1945</span>&#160;          liter_gene != aiochromfixlen_toMutate.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#a014e2a6eac1f0dc7655e37b2a8355a4e">end</a>()-1;</div><div class="line"><a name="l01946"></a><span class="lineno"> 1946</span>&#160;          liter_gene++)</div><div class="line"><a name="l01947"></a><span class="lineno"> 1947</span>&#160;      {</div><div class="line"><a name="l01948"></a><span class="lineno"> 1948</span>&#160;      <span class="keywordflow">if</span> ( *liter_gene &gt; lcidx_Cs ) {</div><div class="line"><a name="l01949"></a><span class="lineno"> 1949</span>&#160;        --(*liter_gene);</div><div class="line"><a name="l01950"></a><span class="lineno"> 1950</span>&#160;      }</div><div class="line"><a name="l01951"></a><span class="lineno"> 1951</span>&#160;      <span class="keywordflow">else</span> <span class="keywordflow">if</span> ( *liter_gene == lcidx_Cs ) { </div><div class="line"><a name="l01952"></a><span class="lineno"> 1952</span>&#160;        *liter_gene = T_CLUSTERIDX(<a class="code" href="nearestinstance__operator_8hpp.html#ac6dfec13abcffd9b8f8abd4ad0cf6f11">NEARESTCENTROID_UNKNOWN</a>);</div><div class="line"><a name="l01953"></a><span class="lineno"> 1953</span>&#160;      }</div><div class="line"><a name="l01954"></a><span class="lineno"> 1954</span>&#160;    }</div><div class="line"><a name="l01955"></a><span class="lineno"> 1955</span>&#160;</div><div class="line"><a name="l01956"></a><span class="lineno"> 1956</span>&#160;    <a class="code" href="classpartition_1_1_partition_label.html">partition::PartitionLabel</a></div><div class="line"><a name="l01957"></a><span class="lineno"> 1957</span>&#160;      &lt;T_CLUSTERIDX&gt;</div><div class="line"><a name="l01958"></a><span class="lineno"> 1958</span>&#160;      lpartition_clusters</div><div class="line"><a name="l01959"></a><span class="lineno"> 1959</span>&#160;      (aiochromfixlen_toMutate.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#a4d1d15f6be16c0d0a23824033993aa71">getString</a>(),</div><div class="line"><a name="l01960"></a><span class="lineno"> 1960</span>&#160;       <a class="code" href="classgaencode_1_1_chrom_fixed_length.html#a406e67fa48d6cdfc7a01f0c6e04f373b">gaencode::ChromFixedLength&lt;T_CLUSTERIDX,T_REAL&gt;::stcgetStringSize</a>()-1,</div><div class="line"><a name="l01961"></a><span class="lineno"> 1961</span>&#160;       (aiochromfixlen_toMutate.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#ab9d0b01b82cd679c6232dcd78c13e9d2">getGene</a></div><div class="line"><a name="l01962"></a><span class="lineno"> 1962</span>&#160;        (<a class="code" href="classgaencode_1_1_chrom_fixed_length.html">gaencode::ChromFixedLength&lt;T_CLUSTERIDX,T_REAL&gt;::stcgetStringSize</a>()-1)-1)</div><div class="line"><a name="l01963"></a><span class="lineno"> 1963</span>&#160;       );</div><div class="line"><a name="l01964"></a><span class="lineno"> 1964</span>&#160;</div><div class="line"><a name="l01965"></a><span class="lineno"> 1965</span>&#160;    <a class="code" href="classmat_1_1_matrix_row.html">mat::MatrixRow&lt;T_FEATURE&gt;</a> </div><div class="line"><a name="l01966"></a><span class="lineno"> 1966</span>&#160;      lmatrixrowt_centroids</div><div class="line"><a name="l01967"></a><span class="lineno"> 1967</span>&#160;      (<a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a></div><div class="line"><a name="l01968"></a><span class="lineno"> 1968</span>&#160;       (aiochromfixlen_toMutate.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#ab9d0b01b82cd679c6232dcd78c13e9d2">getGene</a></div><div class="line"><a name="l01969"></a><span class="lineno"> 1969</span>&#160;        (<a class="code" href="classgaencode_1_1_chrom_fixed_length.html">gaencode::ChromFixedLength&lt;T_CLUSTERIDX,T_REAL&gt;::stcgetStringSize</a>()-1)-1</div><div class="line"><a name="l01970"></a><span class="lineno"> 1970</span>&#160;        ),</div><div class="line"><a name="l01971"></a><span class="lineno"> 1971</span>&#160;       <a class="code" href="classdata_1_1_instance.html">data::Instance&lt;T_FEATURE&gt;::getNumDimensions</a>() </div><div class="line"><a name="l01972"></a><span class="lineno"> 1972</span>&#160;       );</div><div class="line"><a name="l01973"></a><span class="lineno"> 1973</span>&#160;</div><div class="line"><a name="l01974"></a><span class="lineno"> 1974</span>&#160;    <a class="code" href="classmat_1_1_matrix_row.html">mat::MatrixRow&lt;T_FEATURE_SUM&gt;</a>       </div><div class="line"><a name="l01975"></a><span class="lineno"> 1975</span>&#160;      lmatrixrowt_sumInstCluster</div><div class="line"><a name="l01976"></a><span class="lineno"> 1976</span>&#160;      (lmatrixrowt_centroids.getNumRows(),</div><div class="line"><a name="l01977"></a><span class="lineno"> 1977</span>&#160;       <a class="code" href="classdata_1_1_instance.html#a90d1eaeb66cc1470bbfdb95434fdb761">data::Instance&lt;T_FEATURE&gt;::getNumDimensions</a>()</div><div class="line"><a name="l01978"></a><span class="lineno"> 1978</span>&#160;       );</div><div class="line"><a name="l01979"></a><span class="lineno"> 1979</span>&#160;        </div><div class="line"><a name="l01980"></a><span class="lineno"> 1980</span>&#160;    std::vector&lt;T_INSTANCES_CLUSTER_K&gt; </div><div class="line"><a name="l01981"></a><span class="lineno"> 1981</span>&#160;      lvectort_numInstClusterK(lmatrixrowt_centroids.getNumRows()); </div><div class="line"><a name="l01982"></a><span class="lineno"> 1982</span>&#160;</div><div class="line"><a name="l01983"></a><span class="lineno"> 1983</span>&#160;    <a class="code" href="namespaceclusteringop.html#ac52fbdbee047ca93bef1426d6493f31f">clusteringop::getCentroids</a></div><div class="line"><a name="l01984"></a><span class="lineno"> 1984</span>&#160;      (lmatrixrowt_centroids,</div><div class="line"><a name="l01985"></a><span class="lineno"> 1985</span>&#160;       lmatrixrowt_sumInstCluster,</div><div class="line"><a name="l01986"></a><span class="lineno"> 1986</span>&#160;       lvectort_numInstClusterK,</div><div class="line"><a name="l01987"></a><span class="lineno"> 1987</span>&#160;       lpartition_clusters,</div><div class="line"><a name="l01988"></a><span class="lineno"> 1988</span>&#160;       aiiterator_instfirst,</div><div class="line"><a name="l01989"></a><span class="lineno"> 1989</span>&#160;       aiiterator_instlast </div><div class="line"><a name="l01990"></a><span class="lineno"> 1990</span>&#160;       );</div><div class="line"><a name="l01991"></a><span class="lineno"> 1991</span>&#160;  </div><div class="line"><a name="l01992"></a><span class="lineno"> 1992</span>&#160;    <a class="code" href="namespaceclusteringop.html#a4cd166849eef381706813bb06e2029b4">clusteringop::setUpCuster</a></div><div class="line"><a name="l01993"></a><span class="lineno"> 1993</span>&#160;      (aiochromfixlen_toMutate.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#a4d1d15f6be16c0d0a23824033993aa71">getString</a>(),</div><div class="line"><a name="l01994"></a><span class="lineno"> 1994</span>&#160;       lmatrixrowt_centroids,</div><div class="line"><a name="l01995"></a><span class="lineno"> 1995</span>&#160;       aiiterator_instfirst,</div><div class="line"><a name="l01996"></a><span class="lineno"> 1996</span>&#160;       aiiterator_instlast,</div><div class="line"><a name="l01997"></a><span class="lineno"> 1997</span>&#160;       aifunc2p_dist</div><div class="line"><a name="l01998"></a><span class="lineno"> 1998</span>&#160;       );</div><div class="line"><a name="l01999"></a><span class="lineno"> 1999</span>&#160;    </div><div class="line"><a name="l02000"></a><span class="lineno"> 2000</span>&#160;    aiochromfixlen_toMutate.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#a62cd9d117ffefb43b4de56cf82bc44bc">setGene</a></div><div class="line"><a name="l02001"></a><span class="lineno"> 2001</span>&#160;    (<a class="code" href="classgaencode_1_1_chrom_fixed_length.html">gaencode::ChromFixedLength&lt;T_CLUSTERIDX,T_REAL&gt;::stcgetStringSize</a>()-1,</div><div class="line"><a name="l02002"></a><span class="lineno"> 2002</span>&#160;     aiochromfixlen_toMutate.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#ab9d0b01b82cd679c6232dcd78c13e9d2">getGene</a></div><div class="line"><a name="l02003"></a><span class="lineno"> 2003</span>&#160;        (<a class="code" href="classgaencode_1_1_chrom_fixed_length.html">gaencode::ChromFixedLength&lt;T_CLUSTERIDX,T_REAL&gt;::stcgetStringSize</a>()-1)-1</div><div class="line"><a name="l02004"></a><span class="lineno"> 2004</span>&#160;     );</div><div class="line"><a name="l02005"></a><span class="lineno"> 2005</span>&#160;</div><div class="line"><a name="l02006"></a><span class="lineno"> 2006</span>&#160;    <a class="code" href="namespaceinterfacesse.html#afaa45a2a27710ea2dfa979289cf4961d">std::swap</a>(aomatrixrowt_centroids,lmatrixrowt_centroids);</div><div class="line"><a name="l02007"></a><span class="lineno"> 2007</span>&#160;    <a class="code" href="namespaceinterfacesse.html#afaa45a2a27710ea2dfa979289cf4961d">std::swap</a>(aomatrixrowt_sumInstCluster,lmatrixrowt_sumInstCluster);</div><div class="line"><a name="l02008"></a><span class="lineno"> 2008</span>&#160;    <a class="code" href="namespaceinterfacesse.html#afaa45a2a27710ea2dfa979289cf4961d">std::swap</a>(aovectort_numInstClusterK,lvectort_numInstClusterK);</div><div class="line"><a name="l02009"></a><span class="lineno"> 2009</span>&#160;  }</div><div class="line"><a name="l02010"></a><span class="lineno"> 2010</span>&#160;</div><div class="line"><a name="l02011"></a><span class="lineno"> 2011</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l02012"></a><span class="lineno"> 2012</span>&#160;  <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l02013"></a><span class="lineno"> 2013</span>&#160;    std::cout</div><div class="line"><a name="l02014"></a><span class="lineno"> 2014</span>&#160;      &lt;&lt; lpc_labelFunc</div><div class="line"><a name="l02015"></a><span class="lineno"> 2015</span>&#160;      &lt;&lt; <span class="stringliteral">&quot;: OUT(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="charliteral">&#39;)&#39;</span></div><div class="line"><a name="l02016"></a><span class="lineno"> 2016</span>&#160;      &lt;&lt; <span class="stringliteral">&quot; K = &quot;</span></div><div class="line"><a name="l02017"></a><span class="lineno"> 2017</span>&#160;      &lt;&lt; aiochromfixlen_toMutate.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#ab9d0b01b82cd679c6232dcd78c13e9d2">getGene</a></div><div class="line"><a name="l02018"></a><span class="lineno"> 2018</span>&#160;      (<a class="code" href="classgaencode_1_1_chrom_fixed_length.html">gaencode::ChromFixedLength&lt;T_CLUSTERIDX,T_REAL&gt;::stcgetStringSize</a>()-1)</div><div class="line"><a name="l02019"></a><span class="lineno"> 2019</span>&#160;      &lt;&lt; <span class="stringliteral">&quot; lcidx_Cs = &quot;</span> &lt;&lt; lcidx_Cs</div><div class="line"><a name="l02020"></a><span class="lineno"> 2020</span>&#160;      &lt;&lt; <span class="charliteral">&#39;\n&#39;</span>;</div><div class="line"><a name="l02021"></a><span class="lineno"> 2021</span>&#160;    std::ostringstream lostrstream_labeltoMutate;</div><div class="line"><a name="l02022"></a><span class="lineno"> 2022</span>&#160;    lostrstream_labeltoMutate &lt;&lt; <span class="stringliteral">&quot;OUT:&quot;</span> &lt;&lt; lpc_labelFunc &lt;&lt; <span class="stringliteral">&quot;:aiochromfixlen_toMutate:&quot;</span>;</div><div class="line"><a name="l02023"></a><span class="lineno"> 2023</span>&#160;    aiochromfixlen_toMutate.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#a2d0b4e4d46c2f224ce34cf795407b407">print</a>(std::cout,lostrstream_labeltoMutate.str().c_str());</div><div class="line"><a name="l02024"></a><span class="lineno"> 2024</span>&#160;    std::cout &lt;&lt; std::endl;</div><div class="line"><a name="l02025"></a><span class="lineno"> 2025</span>&#160;  }</div><div class="line"><a name="l02026"></a><span class="lineno"> 2026</span>&#160;  --geiinparam_verbose;</div><div class="line"><a name="l02027"></a><span class="lineno"> 2027</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l02028"></a><span class="lineno"> 2028</span>&#160;</div><div class="line"><a name="l02029"></a><span class="lineno"> 2029</span>&#160;} <span class="comment">/*END MO1</span></div><div class="line"><a name="l02030"></a><span class="lineno"> 2030</span>&#160;<span class="comment">   */</span></div><div class="line"><a name="l02031"></a><span class="lineno"> 2031</span>&#160;</div><div class="line"><a name="l02039"></a><span class="lineno"> 2039</span>&#160;<span class="keyword">template</span> &lt;<span class="keyword">typename</span> T_CLUSTERIDX,</div><div class="line"><a name="l02040"></a><span class="lineno"> 2040</span>&#160;          <span class="keyword">typename</span> T_REAL,</div><div class="line"><a name="l02041"></a><span class="lineno"> 2041</span>&#160;          <span class="keyword">typename</span> T_FEATURE,</div><div class="line"><a name="l02042"></a><span class="lineno"> 2042</span>&#160;          <span class="keyword">typename</span> INPUT_ITERATOR</div><div class="line"><a name="l02043"></a><span class="lineno"> 2043</span>&#160;          &gt;</div><div class="line"><a name="l02044"></a><span class="lineno"> 2044</span>&#160;<span class="keywordtype">void</span></div><div class="line"><a name="l02045"></a><span class="lineno"> 2045</span>&#160;<a class="code" href="namespacegaclusteringop.html#a3c99bd6485c6e3a0daf93aa53a97edb9">MO2</a></div><div class="line"><a name="l02046"></a><span class="lineno"><a class="line" href="namespacegaclusteringop.html#a3c99bd6485c6e3a0daf93aa53a97edb9"> 2046</a></span>&#160;(<a class="code" href="classgaencode_1_1_chrom_fixed_length.html">gaencode::ChromFixedLength&lt;T_CLUSTERIDX,T_REAL&gt;</a>   &amp;aiochromfixlen_toMutate,</div><div class="line"><a name="l02047"></a><span class="lineno"> 2047</span>&#160; <span class="keyword">const</span> INPUT_ITERATOR                              aiiterator_instfirst,</div><div class="line"><a name="l02048"></a><span class="lineno"> 2048</span>&#160; <span class="keyword">const</span> <a class="code" href="structdist_1_1_dist.html">dist::Dist&lt;T_REAL,T_FEATURE&gt;</a>                &amp;aifunc2p_dist</div><div class="line"><a name="l02049"></a><span class="lineno"> 2049</span>&#160; )</div><div class="line"><a name="l02050"></a><span class="lineno"> 2050</span>&#160;{  </div><div class="line"><a name="l02051"></a><span class="lineno"> 2051</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l02052"></a><span class="lineno"> 2052</span>&#160;  <span class="keyword">const</span> <span class="keywordtype">char</span>* lpc_labelFunc = <span class="stringliteral">&quot;gaclusteringop::MO2&quot;</span>;</div><div class="line"><a name="l02053"></a><span class="lineno"> 2053</span>&#160;  ++geiinparam_verbose;</div><div class="line"><a name="l02054"></a><span class="lineno"> 2054</span>&#160;  <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l02055"></a><span class="lineno"> 2055</span>&#160;    std::cout</div><div class="line"><a name="l02056"></a><span class="lineno"> 2056</span>&#160;      &lt;&lt; lpc_labelFunc</div><div class="line"><a name="l02057"></a><span class="lineno"> 2057</span>&#160;      &lt;&lt; <span class="stringliteral">&quot;:  IN(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="charliteral">&#39;)&#39;</span></div><div class="line"><a name="l02058"></a><span class="lineno"> 2058</span>&#160;      &lt;&lt; <span class="stringliteral">&quot; K = &quot;</span></div><div class="line"><a name="l02059"></a><span class="lineno"> 2059</span>&#160;      &lt;&lt; aiochromfixlen_toMutate.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#ab9d0b01b82cd679c6232dcd78c13e9d2">getGene</a></div><div class="line"><a name="l02060"></a><span class="lineno"> 2060</span>&#160;      (<a class="code" href="classgaencode_1_1_chrom_fixed_length.html">gaencode::ChromFixedLength&lt;T_CLUSTERIDX,T_REAL&gt;::stcgetStringSize</a>()-1)</div><div class="line"><a name="l02061"></a><span class="lineno"> 2061</span>&#160;        &lt;&lt; <span class="charliteral">&#39;\n&#39;</span>;</div><div class="line"><a name="l02062"></a><span class="lineno"> 2062</span>&#160;    std::ostringstream lostrstream_labeltoMutate;</div><div class="line"><a name="l02063"></a><span class="lineno"> 2063</span>&#160;    lostrstream_labeltoMutate &lt;&lt; <span class="stringliteral">&quot;IN:&quot;</span> &lt;&lt; lpc_labelFunc &lt;&lt; <span class="stringliteral">&quot;:aiochromfixlen_toMutate:&quot;</span>;</div><div class="line"><a name="l02064"></a><span class="lineno"> 2064</span>&#160;    aiochromfixlen_toMutate.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#a2d0b4e4d46c2f224ce34cf795407b407">print</a>(std::cout,lostrstream_labeltoMutate.str().c_str());</div><div class="line"><a name="l02065"></a><span class="lineno"> 2065</span>&#160;    std::cout</div><div class="line"><a name="l02066"></a><span class="lineno"> 2066</span>&#160;      &lt;&lt; <span class="stringliteral">&quot;\n input  dist::Dist&lt;T_REAL,T_FEATURE&gt; &amp;aifunc2p_dist[&quot;</span> &lt;&lt; &amp;aifunc2p_dist &lt;&lt; <span class="charliteral">&#39;]&#39;</span></div><div class="line"><a name="l02067"></a><span class="lineno"> 2067</span>&#160;      &lt;&lt;  <span class="stringliteral">&quot;\n)&quot;</span></div><div class="line"><a name="l02068"></a><span class="lineno"> 2068</span>&#160;      &lt;&lt; std::endl;</div><div class="line"><a name="l02069"></a><span class="lineno"> 2069</span>&#160;  }</div><div class="line"><a name="l02070"></a><span class="lineno"> 2070</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l02071"></a><span class="lineno"> 2071</span>&#160;</div><div class="line"><a name="l02072"></a><span class="lineno"> 2072</span>&#160; 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 std::list&lt;uintidx&gt; llist_idxInstanceInCs;</div><div class="line"><a name="l02081"></a><span class="lineno"> 2081</span>&#160;  <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a> luintidx_iInst = 0;</div><div class="line"><a name="l02082"></a><span class="lineno"> 2082</span>&#160;  <span class="keywordflow">for</span> ( <span class="keyword">auto</span> liter_gene = aiochromfixlen_toMutate.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#af29275f1369d5ba7ca30da4831a528db">begin</a>();</div><div class="line"><a name="l02083"></a><span class="lineno"> 2083</span>&#160;        liter_gene != aiochromfixlen_toMutate.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#a014e2a6eac1f0dc7655e37b2a8355a4e">end</a>()-1;</div><div class="line"><a name="l02084"></a><span class="lineno"> 2084</span>&#160;        liter_gene++</div><div class="line"><a name="l02085"></a><span class="lineno"> 2085</span>&#160;        )</div><div class="line"><a name="l02086"></a><span class="lineno"> 2086</span>&#160;    {</div><div class="line"><a name="l02087"></a><span class="lineno"> 2087</span>&#160;    <span class="keywordflow">if</span> ( *liter_gene == lcidx_Cs ) {</div><div class="line"><a name="l02088"></a><span class="lineno"> 2088</span>&#160;      llist_idxInstanceInCs.push_back(luintidx_iInst);</div><div class="line"><a name="l02089"></a><span class="lineno"> 2089</span>&#160;    }</div><div class="line"><a name="l02090"></a><span class="lineno"> 2090</span>&#160;    ++luintidx_iInst;</div><div class="line"><a name="l02091"></a><span class="lineno"> 2091</span>&#160;  }</div><div class="line"><a name="l02092"></a><span class="lineno"> 2092</span>&#160;  </div><div class="line"><a name="l02093"></a><span class="lineno"> 2093</span>&#160;  <span class="keywordflow">if</span> (llist_idxInstanceInCs.size() &gt; 2 ) {</div><div class="line"><a name="l02094"></a><span class="lineno"> 2094</span>&#160;      </div><div class="line"><a name="l02095"></a><span class="lineno"> 2095</span>&#160;    std::uniform_int_distribution&lt;uintidx&gt; uniformdis_consecutiveS1</div><div class="line"><a name="l02096"></a><span class="lineno"> 2096</span>&#160;      (0, <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>(llist_idxInstanceInCs.size()-1) );</div><div class="line"><a name="l02097"></a><span class="lineno"> 2097</span>&#160;      </div><div class="line"><a name="l02098"></a><span class="lineno"> 2098</span>&#160;    <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a> luintidx_S1 =</div><div class="line"><a name="l02099"></a><span class="lineno"> 2099</span>&#160;      uniformdis_consecutiveS1(<a class="code" href="ga__clustering__operator_8hpp.html#acee5944d570f2fb7efdf1d4c801b30fb">gmt19937_eng</a>);</div><div class="line"><a name="l02100"></a><span class="lineno"> 2100</span>&#160;    <span class="keyword">auto</span> literlist_idxS1 = llist_idxInstanceInCs.begin();</div><div class="line"><a name="l02101"></a><span class="lineno"> 2101</span>&#160;    std::advance(literlist_idxS1,luintidx_S1);</div><div class="line"><a name="l02102"></a><span class="lineno"> 2102</span>&#160; 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      aifunc2p_dist</div><div class="line"><a name="l02111"></a><span class="lineno"> 2111</span>&#160;       );</div><div class="line"><a name="l02112"></a><span class="lineno"> 2112</span>&#160;</div><div class="line"><a name="l02113"></a><span class="lineno"> 2113</span>&#160;    T_CLUSTERIDX lcidx_newCluster = </div><div class="line"><a name="l02114"></a><span class="lineno"> 2114</span>&#160;      aiochromfixlen_toMutate.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#ab9d0b01b82cd679c6232dcd78c13e9d2">getGene</a></div><div class="line"><a name="l02115"></a><span class="lineno"> 2115</span>&#160;      (<a class="code" href="classgaencode_1_1_chrom_fixed_length.html">gaencode::ChromFixedLength&lt;T_CLUSTERIDX,T_REAL&gt;::stcgetStringSize</a>()-1);</div><div class="line"><a name="l02116"></a><span class="lineno"> 2116</span>&#160;</div><div class="line"><a name="l02117"></a><span class="lineno"> 2117</span>&#160;    <span class="keyword">const</span> T_FEATURE* linst_featuresS1 =</div><div class="line"><a name="l02118"></a><span class="lineno"> 2118</span>&#160;      (*std::next(aiiterator_instfirst,luintidx_S1))-&gt;getFeatures();</div><div class="line"><a name="l02119"></a><span class="lineno"> 2119</span>&#160;      </div><div class="line"><a name="l02120"></a><span class="lineno"> 2120</span>&#160;    <span class="keyword">const</span> T_FEATURE* linst_featuresS2 =</div><div class="line"><a name="l02121"></a><span class="lineno"> 2121</span>&#160;      (*std::next(aiiterator_instfirst,luintidx_S2))-&gt;getFeatures();</div><div class="line"><a name="l02122"></a><span class="lineno"> 2122</span>&#160;      </div><div class="line"><a name="l02123"></a><span class="lineno"> 2123</span>&#160;    <span class="keywordflow">for</span> (<span class="keyword">auto</span> lui_idxInstanceInCs: llist_idxInstanceInCs) {</div><div class="line"><a name="l02124"></a><span class="lineno"> 2124</span>&#160;</div><div class="line"><a name="l02125"></a><span class="lineno"> 2125</span>&#160;      T_REAL lrt_distS1toSi = </div><div class="line"><a name="l02126"></a><span class="lineno"> 2126</span>&#160;        aifunc2p_dist </div><div class="line"><a name="l02127"></a><span class="lineno"> 2127</span>&#160;        (linst_featuresS1,</div><div class="line"><a name="l02128"></a><span class="lineno"> 2128</span>&#160;         (*std::next(aiiterator_instfirst,lui_idxInstanceInCs))-&gt;getFeatures(),</div><div class="line"><a name="l02129"></a><span class="lineno"> 2129</span>&#160;         <a class="code" href="classdata_1_1_instance.html">data::Instance&lt;T_FEATURE&gt;::getNumDimensions</a>()</div><div class="line"><a name="l02130"></a><span class="lineno"> 2130</span>&#160;         );</div><div class="line"><a name="l02131"></a><span class="lineno"> 2131</span>&#160;</div><div class="line"><a name="l02132"></a><span class="lineno"> 2132</span>&#160;      T_REAL lrt_distS2toSi = </div><div class="line"><a name="l02133"></a><span class="lineno"> 2133</span>&#160;        aifunc2p_dist </div><div class="line"><a name="l02134"></a><span class="lineno"> 2134</span>&#160;        (linst_featuresS2,</div><div class="line"><a name="l02135"></a><span class="lineno"> 2135</span>&#160;         (*std::next(aiiterator_instfirst,lui_idxInstanceInCs))-&gt;getFeatures(),</div><div class="line"><a name="l02136"></a><span class="lineno"> 2136</span>&#160;         <a class="code" href="classdata_1_1_instance.html">data::Instance&lt;T_FEATURE&gt;::getNumDimensions</a>()</div><div class="line"><a name="l02137"></a><span class="lineno"> 2137</span>&#160;         );</div><div class="line"><a name="l02138"></a><span class="lineno"> 2138</span>&#160;    </div><div class="line"><a name="l02139"></a><span class="lineno"> 2139</span>&#160;      <span class="keywordflow">if</span> ( lrt_distS2toSi &lt; lrt_distS1toSi ) {</div><div class="line"><a name="l02140"></a><span class="lineno"> 2140</span>&#160;        aiochromfixlen_toMutate.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#a62cd9d117ffefb43b4de56cf82bc44bc">setGene</a>(lui_idxInstanceInCs,lcidx_newCluster);</div><div class="line"><a name="l02141"></a><span class="lineno"> 2141</span>&#160;      }</div><div class="line"><a name="l02142"></a><span class="lineno"> 2142</span>&#160;      </div><div class="line"><a name="l02143"></a><span class="lineno"> 2143</span>&#160;    }</div><div class="line"><a name="l02144"></a><span class="lineno"> 2144</span>&#160;    <span class="comment">//Code in string number of cluster</span></div><div class="line"><a name="l02145"></a><span class="lineno"> 2145</span>&#160;    aiochromfixlen_toMutate.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#a62cd9d117ffefb43b4de56cf82bc44bc">setGene</a></div><div class="line"><a name="l02146"></a><span class="lineno"> 2146</span>&#160;      (<a class="code" href="classgaencode_1_1_chrom_fixed_length.html">gaencode::ChromFixedLength&lt;T_CLUSTERIDX,T_REAL&gt;::stcgetStringSize</a>()-1,</div><div class="line"><a name="l02147"></a><span class="lineno"> 2147</span>&#160;       lcidx_newCluster+1</div><div class="line"><a name="l02148"></a><span class="lineno"> 2148</span>&#160;       );</div><div class="line"><a name="l02149"></a><span class="lineno"> 2149</span>&#160;  }</div><div class="line"><a name="l02150"></a><span class="lineno"> 2150</span>&#160;    </div><div class="line"><a name="l02151"></a><span class="lineno"> 2151</span>&#160;</div><div class="line"><a name="l02152"></a><span class="lineno"> 2152</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l02153"></a><span class="lineno"> 2153</span>&#160;  <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l02154"></a><span class="lineno"> 2154</span>&#160;    std::cout</div><div class="line"><a name="l02155"></a><span class="lineno"> 2155</span>&#160;      &lt;&lt; lpc_labelFunc</div><div class="line"><a name="l02156"></a><span class="lineno"> 2156</span>&#160;      &lt;&lt; <span class="stringliteral">&quot;: OUT(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="charliteral">&#39;)&#39;</span></div><div class="line"><a name="l02157"></a><span class="lineno"> 2157</span>&#160;      &lt;&lt; <span class="stringliteral">&quot; K = &quot;</span></div><div class="line"><a name="l02158"></a><span class="lineno"> 2158</span>&#160;      &lt;&lt; aiochromfixlen_toMutate.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#ab9d0b01b82cd679c6232dcd78c13e9d2">getGene</a></div><div class="line"><a name="l02159"></a><span class="lineno"> 2159</span>&#160;      (<a class="code" href="classgaencode_1_1_chrom_fixed_length.html">gaencode::ChromFixedLength&lt;T_CLUSTERIDX,T_REAL&gt;::stcgetStringSize</a>()-1)</div><div class="line"><a name="l02160"></a><span class="lineno"> 2160</span>&#160;      &lt;&lt; <span class="stringliteral">&quot; lcidx_Cs = &quot;</span> &lt;&lt; lcidx_Cs</div><div class="line"><a name="l02161"></a><span class="lineno"> 2161</span>&#160;      &lt;&lt; <span class="charliteral">&#39;\n&#39;</span>;</div><div class="line"><a name="l02162"></a><span class="lineno"> 2162</span>&#160;    std::ostringstream lostrstream_labeltoMutate;</div><div class="line"><a name="l02163"></a><span class="lineno"> 2163</span>&#160;    lostrstream_labeltoMutate &lt;&lt; <span class="stringliteral">&quot;OUT:&quot;</span> &lt;&lt; lpc_labelFunc &lt;&lt; <span class="stringliteral">&quot;:aiochromfixlen_toMutate:&quot;</span>;</div><div class="line"><a name="l02164"></a><span class="lineno"> 2164</span>&#160;    aiochromfixlen_toMutate.<a class="code" href="classgaencode_1_1_chrom_fixed_length.html#a2d0b4e4d46c2f224ce34cf795407b407">print</a>(std::cout,lostrstream_labeltoMutate.str().c_str());</div><div class="line"><a name="l02165"></a><span class="lineno"> 2165</span>&#160;    std::cout &lt;&lt; std::endl;</div><div class="line"><a name="l02166"></a><span class="lineno"> 2166</span>&#160;  }</div><div class="line"><a name="l02167"></a><span class="lineno"> 2167</span>&#160;  --geiinparam_verbose;</div><div class="line"><a name="l02168"></a><span class="lineno"> 2168</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l02169"></a><span class="lineno"> 2169</span>&#160;</div><div class="line"><a name="l02170"></a><span class="lineno"> 2170</span>&#160;} <span class="comment">/*END MO2</span></div><div class="line"><a name="l02171"></a><span class="lineno"> 2171</span>&#160;<span class="comment">   */</span></div><div class="line"><a name="l02172"></a><span class="lineno"> 2172</span>&#160;</div><div class="line"><a name="l02173"></a><span class="lineno"> 2173</span>&#160;</div><div class="line"><a name="l02182"></a><span class="lineno"> 2182</span>&#160;<span class="keyword">template</span> &lt;<span class="keyword">typename</span> T_CLUSTERIDX,</div><div class="line"><a name="l02183"></a><span class="lineno"> 2183</span>&#160;          <span class="keyword">typename</span> T_REAL, <span class="comment">//DATA TYPE OBJETIVE FUNCTION AND T_FITNESS, </span></div><div class="line"><a name="l02184"></a><span class="lineno"> 2184</span>&#160;          <span class="keyword">typename</span> T_FEATURE,</div><div class="line"><a name="l02185"></a><span class="lineno"> 2185</span>&#160;          <span class="keyword">typename</span> T_FEATURE_SUM,</div><div class="line"><a name="l02186"></a><span class="lineno"> 2186</span>&#160;          <span class="keyword">typename</span> T_INSTANCES_CLUSTER_K,</div><div class="line"><a name="l02187"></a><span class="lineno"> 2187</span>&#160;          <span class="keyword">typename</span> INPUT_ITERATOR</div><div class="line"><a name="l02188"></a><span class="lineno"> 2188</span>&#160;          &gt;</div><div class="line"><a name="l02189"></a><span class="lineno"> 2189</span>&#160;<span class="keywordtype">void</span></div><div class="line"><a name="l02190"></a><span class="lineno"> 2190</span>&#160;<a class="code" href="namespacegaclusteringop.html#a76027f1493ad07ff92bdee8e07d05b15">MO1</a></div><div class="line"><a name="l02191"></a><span class="lineno"><a class="line" href="namespacegaclusteringop.html#a25119300c021923151df355bba35df29"> 2191</a></span>&#160;(<a class="code" href="classgaencode_1_1_chromosome_f_e_a_c.html">gaencode::ChromosomeFEAC</a></div><div class="line"><a name="l02192"></a><span class="lineno"> 2192</span>&#160; &lt;T_CLUSTERIDX,</div><div class="line"><a name="l02193"></a><span class="lineno"> 2193</span>&#160; T_REAL,</div><div class="line"><a name="l02194"></a><span class="lineno"> 2194</span>&#160; T_FEATURE,</div><div class="line"><a name="l02195"></a><span class="lineno"> 2195</span>&#160; T_FEATURE_SUM,</div><div class="line"><a name="l02196"></a><span class="lineno"> 2196</span>&#160; T_INSTANCES_CLUSTER_K&gt;          &amp;aochromfeac_toMutate,</div><div class="line"><a name="l02197"></a><span class="lineno"> 2197</span>&#160; INPUT_ITERATOR                  aiiterator_instfirst,</div><div class="line"><a name="l02198"></a><span class="lineno"> 2198</span>&#160; <span class="keyword">const</span> INPUT_ITERATOR            aiiterator_instlast,</div><div class="line"><a name="l02199"></a><span class="lineno"> 2199</span>&#160; <a class="code" href="structdist_1_1_dist.html">dist::Dist&lt;T_REAL,T_FEATURE&gt;</a>    &amp;aifunc2p_dist</div><div class="line"><a name="l02200"></a><span class="lineno"> 2200</span>&#160; )</div><div class="line"><a name="l02201"></a><span class="lineno"> 2201</span>&#160;{</div><div class="line"><a name="l02202"></a><span class="lineno"> 2202</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l02203"></a><span class="lineno"> 2203</span>&#160;  <span class="keyword">const</span> <span class="keywordtype">char</span>* lpc_labelFunc = <span class="stringliteral">&quot;gaclusteringop::MO1&quot;</span>;</div><div class="line"><a name="l02204"></a><span class="lineno"> 2204</span>&#160;  ++geiinparam_verbose;</div><div class="line"><a name="l02205"></a><span class="lineno"> 2205</span>&#160;  <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l02206"></a><span class="lineno"> 2206</span>&#160;    std::cout &lt;&lt; lpc_labelFunc</div><div class="line"><a name="l02207"></a><span class="lineno"> 2207</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;:  IN(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="charliteral">&#39;)&#39;</span></div><div class="line"><a name="l02208"></a><span class="lineno"> 2208</span>&#160;              &lt;&lt; <span class="stringliteral">&quot; K = &quot;</span> &lt;&lt; aochromfeac_toMutate.getNumClusterK()</div><div class="line"><a name="l02209"></a><span class="lineno"> 2209</span>&#160;              &lt;&lt; <span class="stringliteral">&quot; fitness = &quot;</span> &lt;&lt;  aochromfeac_toMutate.getFitness() &lt;&lt; <span class="charliteral">&#39;\n&#39;</span>;</div><div class="line"><a name="l02210"></a><span class="lineno"> 2210</span>&#160;    aochromfeac_toMutate.print(std::cout,lpc_labelFunc,<span class="charliteral">&#39;,&#39;</span>,<span class="charliteral">&#39;;&#39;</span>);</div><div class="line"><a name="l02211"></a><span class="lineno"> 2211</span>&#160;    std::cout &lt;&lt; <span class="stringliteral">&quot;input const aiiterator_instfirst[&quot;</span> &lt;&lt; *aiiterator_instfirst &lt;&lt; <span class="stringliteral">&quot;]\n&quot;</span></div><div class="line"><a name="l02212"></a><span class="lineno"> 2212</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;input const aiiterator_instlast[&quot;</span> &lt;&lt; &amp;aiiterator_instlast &lt;&lt; <span class="stringliteral">&quot;]\n&quot;</span></div><div class="line"><a name="l02213"></a><span class="lineno"> 2213</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;\n input  dist::Dist&lt;T_REAL,T_FEATURE&gt; &amp;aifunc2p_dist[&quot;</span> </div><div class="line"><a name="l02214"></a><span class="lineno"> 2214</span>&#160;              &lt;&lt; &amp;aifunc2p_dist &lt;&lt; <span class="charliteral">&#39;]&#39;</span></div><div class="line"><a name="l02215"></a><span class="lineno"> 2215</span>&#160;              &lt;&lt;  <span class="stringliteral">&quot;\n)&quot;</span></div><div class="line"><a name="l02216"></a><span class="lineno"> 2216</span>&#160;              &lt;&lt; std::endl;</div><div class="line"><a name="l02217"></a><span class="lineno"> 2217</span>&#160;  }</div><div class="line"><a name="l02218"></a><span class="lineno"> 2218</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l02219"></a><span class="lineno"> 2219</span>&#160;</div><div class="line"><a name="l02220"></a><span class="lineno"> 2220</span>&#160;  </div><div class="line"><a name="l02221"></a><span class="lineno"> 2221</span>&#160;  <span class="keywordflow">if</span> ( aochromfeac_toMutate.getNumClusterK() &gt; 2 )  {</div><div class="line"><a name="l02222"></a><span class="lineno"> 2222</span>&#160;</div><div class="line"><a name="l02223"></a><span class="lineno"> 2223</span>&#160;    std::uniform_real_distribution&lt;T_REAL&gt; uniformdis_real01(0, 1);</div><div class="line"><a name="l02224"></a><span class="lineno"> 2224</span>&#160;  </div><div class="line"><a name="l02225"></a><span class="lineno"> 2225</span>&#160;    <a class="code" href="classmat_1_1_matrix_with_row_null.html">mat::MatrixWithRowNull&lt;T_FEATURE&gt;</a> &amp;lmatrixwrownull_genotypeCentroids = </div><div class="line"><a name="l02226"></a><span class="lineno"> 2226</span>&#160;      aochromfeac_toMutate.getCentroids();</div><div class="line"><a name="l02227"></a><span class="lineno"> 2227</span>&#160;  </div><div class="line"><a name="l02228"></a><span class="lineno"> 2228</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l02229"></a><span class="lineno"> 2229</span>&#160;    ++geiinparam_verbose;</div><div class="line"><a name="l02230"></a><span class="lineno"> 2230</span>&#160;    <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l02231"></a><span class="lineno"> 2231</span>&#160;      std::cout &lt;&lt; <span class="stringliteral">&quot;MO1 1.1 RANDOMLY GENERATE A NUMBER n in {1,..., k_g-2}:  IN&quot;</span></div><div class="line"><a name="l02232"></a><span class="lineno"> 2232</span>&#160;                &lt;&lt; <span class="charliteral">&#39;(&#39;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="charliteral">&#39;)&#39;</span></div><div class="line"><a name="l02233"></a><span class="lineno"> 2233</span>&#160;                &lt;&lt; std::endl; </div><div class="line"><a name="l02234"></a><span class="lineno"> 2234</span>&#160;    }</div><div class="line"><a name="l02235"></a><span class="lineno"> 2235</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l02236"></a><span class="lineno"> 2236</span>&#160;</div><div class="line"><a name="l02237"></a><span class="lineno"> 2237</span>&#160;   <span class="comment">/*1.1 Randomly generate a number n \in {1,..., k_g-2}; </span></div><div class="line"><a name="l02238"></a><span class="lineno"> 2238</span>&#160;<span class="comment">      at least two clusters must remain in g </span></div><div class="line"><a name="l02239"></a><span class="lineno"> 2239</span>&#160;<span class="comment">    */</span></div><div class="line"><a name="l02240"></a><span class="lineno"> 2240</span>&#160;    std::uniform_int_distribution&lt;uintidx&gt; uniformdis_uiN</div><div class="line"><a name="l02241"></a><span class="lineno"> 2241</span>&#160;      (1,lmatrixwrownull_genotypeCentroids.<a class="code" href="classmat_1_1_matrix_base.html#ac500eedd5e203327d3292f8ab22d8f3e">getNumRows</a>()- (<a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>) 2);</div><div class="line"><a name="l02242"></a><span class="lineno"> 2242</span>&#160;    <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a> luintidx_n = uniformdis_uiN(<a class="code" href="ga__clustering__operator_8hpp.html#acee5944d570f2fb7efdf1d4c801b30fb">gmt19937_eng</a>);</div><div class="line"><a name="l02243"></a><span class="lineno"> 2243</span>&#160;      </div><div class="line"><a name="l02244"></a><span class="lineno"> 2244</span>&#160;       </div><div class="line"><a name="l02245"></a><span class="lineno"> 2245</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l02246"></a><span class="lineno"> 2246</span>&#160;    <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l02247"></a><span class="lineno"> 2247</span>&#160;      std::cout &lt;&lt; <span class="stringliteral">&quot;MO1 1.1 RANDOMLY GENERATE A NUMBER n in {1,..., k_g-2}: OUT&quot;</span></div><div class="line"><a name="l02248"></a><span class="lineno"> 2248</span>&#160;                &lt;&lt; <span class="charliteral">&#39;(&#39;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="charliteral">&#39;)&#39;</span></div><div class="line"><a name="l02249"></a><span class="lineno"> 2249</span>&#160;                &lt;&lt; <span class="stringliteral">&quot;\nn = &quot;</span> &lt;&lt; luintidx_n &lt;&lt; <span class="stringliteral">&quot; in {1,...,&quot;</span></div><div class="line"><a name="l02250"></a><span class="lineno"> 2250</span>&#160;                &lt;&lt; lmatrixwrownull_genotypeCentroids.<a class="code" href="classmat_1_1_matrix_base.html#ac500eedd5e203327d3292f8ab22d8f3e">getNumRows</a>()-2  &lt;&lt; <span class="charliteral">&#39;}&#39;</span></div><div class="line"><a name="l02251"></a><span class="lineno"> 2251</span>&#160;                &lt;&lt; std::endl; </div><div class="line"><a name="l02252"></a><span class="lineno"> 2252</span>&#160;    }</div><div class="line"><a name="l02253"></a><span class="lineno"> 2253</span>&#160;    --geiinparam_verbose;</div><div class="line"><a name="l02254"></a><span class="lineno"> 2254</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l02255"></a><span class="lineno"> 2255</span>&#160;</div><div class="line"><a name="l02256"></a><span class="lineno"> 2256</span>&#160;    </div><div class="line"><a name="l02257"></a><span class="lineno"> 2257</span>&#160;    <span class="comment">/*1.2 For i = (1,...,n) do:</span></div><div class="line"><a name="l02258"></a><span class="lineno"> 2258</span>&#160;<span class="comment">     */</span></div><div class="line"><a name="l02259"></a><span class="lineno"> 2259</span>&#160;    <span class="keywordflow">for</span> (<a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>  lui_i = 1; lui_i &lt;= luintidx_n; lui_i++) {</div><div class="line"><a name="l02260"></a><span class="lineno"> 2260</span>&#160;      </div><div class="line"><a name="l02261"></a><span class="lineno"> 2261</span>&#160;      <span class="comment">/*1.2.1 Randomly choose a cluster Cs encoded into g </span></div><div class="line"><a name="l02262"></a><span class="lineno"> 2262</span>&#160;<span class="comment">        is lvectoruintidx_Cs[lui_i] for strategy without</span></div><div class="line"><a name="l02263"></a><span class="lineno"> 2263</span>&#160;<span class="comment">        replacement</span></div><div class="line"><a name="l02264"></a><span class="lineno"> 2264</span>&#160;<span class="comment">      */</span></div><div class="line"><a name="l02265"></a><span class="lineno"> 2265</span>&#160;</div><div class="line"><a name="l02266"></a><span class="lineno"> 2266</span>&#160;      std::vector&lt;T_REAL&gt;&amp; lvectorrt_genotypePartialFcC =</div><div class="line"><a name="l02267"></a><span class="lineno"> 2267</span>&#160;        aochromfeac_toMutate.getPartialFcC();</div><div class="line"><a name="l02268"></a><span class="lineno"> 2268</span>&#160;</div><div class="line"><a name="l02269"></a><span class="lineno"> 2269</span>&#160;      <span class="comment">// { BEGIN 1.2.1</span></div><div class="line"><a name="l02270"></a><span class="lineno"> 2270</span>&#160;                </div><div class="line"><a name="l02271"></a><span class="lineno"> 2271</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l02272"></a><span class="lineno"> 2272</span>&#160;      <span class="keyword">const</span> <span class="keywordtype">char</span>* lpc_labelFuncStep = <span class="stringliteral">&quot;MO1 1.2.1 RANDOMLY CHOOSE A CLUSTER CS ENCODED INTO G&quot;</span>;</div><div class="line"><a name="l02273"></a><span class="lineno"> 2273</span>&#160;      ++geiinparam_verbose;</div><div class="line"><a name="l02274"></a><span class="lineno"> 2274</span>&#160;      <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l02275"></a><span class="lineno"> 2275</span>&#160;      std::cout &lt;&lt;  lpc_labelFuncStep</div><div class="line"><a name="l02276"></a><span class="lineno"> 2276</span>&#160;                &lt;&lt; <span class="stringliteral">&quot;:  IN(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="charliteral">&#39;)&#39;</span></div><div class="line"><a name="l02277"></a><span class="lineno"> 2277</span>&#160;                &lt;&lt; std::endl; </div><div class="line"><a name="l02278"></a><span class="lineno"> 2278</span>&#160;    }</div><div class="line"><a name="l02279"></a><span class="lineno"> 2279</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l02280"></a><span class="lineno"> 2280</span>&#160;      </div><div class="line"><a name="l02281"></a><span class="lineno"> 2281</span>&#160;     </div><div class="line"><a name="l02282"></a><span class="lineno"> 2282</span>&#160;<span class="preprocessor">#if defined(ALG_EAC_I_CLUSTERINGLABELVARK_ALVES_CAMPELLO_HRUSCHKA2006) || \</span></div><div class="line"><a name="l02283"></a><span class="lineno"> 2283</span>&#160;<span class="preprocessor">  defined(ALG_EAC_III_CLUSTERINGLABELVARK_ALVES_CAMPELLO_HRUSCHKA2006)</span></div><div class="line"><a name="l02284"></a><span class="lineno"> 2284</span>&#160;</div><div class="line"><a name="l02285"></a><span class="lineno"> 2285</span>&#160;    <span class="comment">/*\cite{Alves:etal:GAclusteringLabelKVar:FEAC:2006}</span></div><div class="line"><a name="l02286"></a><span class="lineno"> 2286</span>&#160;<span class="comment">      EAC-I</span></div><div class="line"><a name="l02287"></a><span class="lineno"> 2287</span>&#160;<span class="comment">      EAC-III</span></div><div class="line"><a name="l02288"></a><span class="lineno"> 2288</span>&#160;<span class="comment">    */</span></div><div class="line"><a name="l02289"></a><span class="lineno"> 2289</span>&#160;    </div><div class="line"><a name="l02290"></a><span class="lineno"> 2290</span>&#160;    std::vector&lt;T_REAL&gt; lvectorT_partialFcCNorma01(lvectorrt_genotypePartialFcC.size(),1);</div><div class="line"><a name="l02291"></a><span class="lineno"> 2291</span>&#160;    <span class="comment">/*1 - fc(Ci)</span></div><div class="line"><a name="l02292"></a><span class="lineno"> 2292</span>&#160;<span class="comment">     */</span></div><div class="line"><a name="l02293"></a><span class="lineno"> 2293</span>&#160;    <a class="code" href="namespaceinterfacesse.html#a9dd5fb43ad8a83ee5cb2f5ba1bb2085b">interfacesse::axpy</a></div><div class="line"><a name="l02294"></a><span class="lineno"> 2294</span>&#160;      (lvectorT_partialFcCNorma01.data(),</div><div class="line"><a name="l02295"></a><span class="lineno"> 2295</span>&#160;       -1.0,</div><div class="line"><a name="l02296"></a><span class="lineno"> 2296</span>&#160;       lvectorrt_genotypePartialFcC.data(),</div><div class="line"><a name="l02297"></a><span class="lineno"> 2297</span>&#160;       (<a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>) lvectorT_partialFcCNorma01.size()</div><div class="line"><a name="l02298"></a><span class="lineno"> 2298</span>&#160;       );</div><div class="line"><a name="l02299"></a><span class="lineno"> 2299</span>&#160;    <span class="comment">/* \sum(1-fc(Ci))</span></div><div class="line"><a name="l02300"></a><span class="lineno"> 2300</span>&#160;<span class="comment">     */</span></div><div class="line"><a name="l02301"></a><span class="lineno"> 2301</span>&#160;    T_REAL lrt_sum1_fc =</div><div class="line"><a name="l02302"></a><span class="lineno"> 2302</span>&#160;      <a class="code" href="namespaceinterfacesse.html#a25f6950d589b92fd5bcf2007fb3fae19">interfacesse::sum</a></div><div class="line"><a name="l02303"></a><span class="lineno"> 2303</span>&#160;      (lvectorT_partialFcCNorma01.data(),</div><div class="line"><a name="l02304"></a><span class="lineno"> 2304</span>&#160;       (<a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>) lvectorT_partialFcCNorma01.size()</div><div class="line"><a name="l02305"></a><span class="lineno"> 2305</span>&#160;       );</div><div class="line"><a name="l02306"></a><span class="lineno"> 2306</span>&#160;    lrt_sum1_fc = 1.0 / lrt_sum1_fc;</div><div class="line"><a name="l02307"></a><span class="lineno"> 2307</span>&#160;  </div><div class="line"><a name="l02308"></a><span class="lineno"> 2308</span>&#160;    <a class="code" href="namespaceinterfacesse.html#a144ebf70bf38495c3de1aca2c8365e08">interfacesse::scal</a></div><div class="line"><a name="l02309"></a><span class="lineno"> 2309</span>&#160;      (lvectorT_partialFcCNorma01.data(),</div><div class="line"><a name="l02310"></a><span class="lineno"> 2310</span>&#160;       lrt_sum1_fc,</div><div class="line"><a name="l02311"></a><span class="lineno"> 2311</span>&#160;       (<a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>) lvectorT_partialFcCNorma01.size()</div><div class="line"><a name="l02312"></a><span class="lineno"> 2312</span>&#160;       );</div><div class="line"><a name="l02313"></a><span class="lineno"> 2313</span>&#160;</div><div class="line"><a name="l02314"></a><span class="lineno"> 2314</span>&#160;    std::vector&lt;T_REAL&gt;&amp;&amp; lvectorrt_probDistRouletteWheel =</div><div class="line"><a name="l02315"></a><span class="lineno"> 2315</span>&#160;        <a class="code" href="namespaceprob.html#aa737d76e6416a765f004cd211eff712d">prob::makeDistRouletteWheel</a></div><div class="line"><a name="l02316"></a><span class="lineno"> 2316</span>&#160;        (lvectorT_partialFcCNorma01.begin(),</div><div class="line"><a name="l02317"></a><span class="lineno"> 2317</span>&#160;         lvectorT_partialFcCNorma01.end(),</div><div class="line"><a name="l02318"></a><span class="lineno"> 2318</span>&#160;         [](<span class="keyword">const</span> T_REAL&amp; lt_metrici) -&gt; T_REAL</div><div class="line"><a name="l02319"></a><span class="lineno"> 2319</span>&#160;         {</div><div class="line"><a name="l02320"></a><span class="lineno"> 2320</span>&#160;           <span class="keywordflow">return</span> lt_metrici;</div><div class="line"><a name="l02321"></a><span class="lineno"> 2321</span>&#160;         }</div><div class="line"><a name="l02322"></a><span class="lineno"> 2322</span>&#160;         );</div><div class="line"><a name="l02323"></a><span class="lineno"> 2323</span>&#160;      </div><div class="line"><a name="l02324"></a><span class="lineno"> 2324</span>&#160;    T_CLUSTERIDX lcidx_Cs =</div><div class="line"><a name="l02325"></a><span class="lineno"> 2325</span>&#160;        <a class="code" href="namespacegaselect.html#ae9cfd02b23815a3c1291b4adb0b7658a">gaselect::getIdxRouletteWheel</a></div><div class="line"><a name="l02326"></a><span class="lineno"> 2326</span>&#160;        (lvectorrt_probDistRouletteWheel,</div><div class="line"><a name="l02327"></a><span class="lineno"> 2327</span>&#160;         T_CLUSTERIDX(0)</div><div class="line"><a name="l02328"></a><span class="lineno"> 2328</span>&#160;         );</div><div class="line"><a name="l02329"></a><span class="lineno"> 2329</span>&#160;        </div><div class="line"><a name="l02330"></a><span class="lineno"> 2330</span>&#160;    <span class="comment">/*END:</span></div><div class="line"><a name="l02331"></a><span class="lineno"> 2331</span>&#160;<span class="comment">      ALG_EAC_I_CLUSTERINGLABELVARK_ALVES_CAMPELLO_HRUSCHKA2006</span></div><div class="line"><a name="l02332"></a><span class="lineno"> 2332</span>&#160;<span class="comment">      ALG_EAC_III_CLUSTERINGLABELVARK_ALVES_CAMPELLO_HRUSCHKA2006</span></div><div class="line"><a name="l02333"></a><span class="lineno"> 2333</span>&#160;<span class="comment">    */</span></div><div class="line"><a name="l02334"></a><span class="lineno"> 2334</span>&#160;    </div><div class="line"><a name="l02335"></a><span class="lineno"> 2335</span>&#160;<span class="preprocessor">#elif defined(ALG_EAC_II_CLUSTERINGLABELVARK_ALVES_CAMPELLO_HRUSCHKA2006) || \</span></div><div class="line"><a name="l02336"></a><span class="lineno"> 2336</span>&#160;<span class="preprocessor">  defined(ALG_FEAC_CLUSTERINGLABELVARK_ALVES_CAMPELLO_HRUSCHKA2006)  </span></div><div class="line"><a name="l02337"></a><span class="lineno"> 2337</span>&#160;      <span class="comment">/*\cite{Alves:etal:GAclusteringLabelKVar:FEAC:2006}</span></div><div class="line"><a name="l02338"></a><span class="lineno"> 2338</span>&#160;<span class="comment">        EAC-II</span></div><div class="line"><a name="l02339"></a><span class="lineno"> 2339</span>&#160;<span class="comment">        F-EAC</span></div><div class="line"><a name="l02340"></a><span class="lineno"> 2340</span>&#160;<span class="comment">      */</span></div><div class="line"><a name="l02341"></a><span class="lineno"> 2341</span>&#160;    </div><div class="line"><a name="l02342"></a><span class="lineno"> 2342</span>&#160;      std::vector&lt;T_REAL&gt;&amp;&amp; lvectorT_partialFcCLinearNorm =</div><div class="line"><a name="l02343"></a><span class="lineno"> 2343</span>&#160;        <a class="code" href="namespaceprob.html#a35475d12404b2fbba2919682ad81f85d">prob::linearNormalization</a></div><div class="line"><a name="l02344"></a><span class="lineno"> 2344</span>&#160;        (lvectorrt_genotypePartialFcC.begin(),</div><div class="line"><a name="l02345"></a><span class="lineno"> 2345</span>&#160;         lvectorrt_genotypePartialFcC.end(),</div><div class="line"><a name="l02346"></a><span class="lineno"> 2346</span>&#160;         [](<span class="keyword">const</span> T_REAL&amp; lt_metrici) -&gt; T_REAL</div><div class="line"><a name="l02347"></a><span class="lineno"> 2347</span>&#160;         {</div><div class="line"><a name="l02348"></a><span class="lineno"> 2348</span>&#160;           <span class="keywordflow">return</span> lt_metrici;</div><div class="line"><a name="l02349"></a><span class="lineno"> 2349</span>&#160;         }</div><div class="line"><a name="l02350"></a><span class="lineno"> 2350</span>&#160;         );</div><div class="line"><a name="l02351"></a><span class="lineno"> 2351</span>&#160;        </div><div class="line"><a name="l02352"></a><span class="lineno"> 2352</span>&#160;      std::vector&lt;T_REAL&gt;&amp;&amp; lvectorrt_probDistRouletteWheel =</div><div class="line"><a name="l02353"></a><span class="lineno"> 2353</span>&#160;        <a class="code" href="namespaceprob.html#aa737d76e6416a765f004cd211eff712d">prob::makeDistRouletteWheel</a></div><div class="line"><a name="l02354"></a><span class="lineno"> 2354</span>&#160;        (lvectorT_partialFcCLinearNorm.begin(),</div><div class="line"><a name="l02355"></a><span class="lineno"> 2355</span>&#160;         lvectorT_partialFcCLinearNorm.end(),</div><div class="line"><a name="l02356"></a><span class="lineno"> 2356</span>&#160;         [](<span class="keyword">const</span> T_REAL&amp; lt_metrici) -&gt; T_REAL</div><div class="line"><a name="l02357"></a><span class="lineno"> 2357</span>&#160;         {</div><div class="line"><a name="l02358"></a><span class="lineno"> 2358</span>&#160;           <span class="keywordflow">return</span> lt_metrici;</div><div class="line"><a name="l02359"></a><span class="lineno"> 2359</span>&#160;         }</div><div class="line"><a name="l02360"></a><span class="lineno"> 2360</span>&#160;         );</div><div class="line"><a name="l02361"></a><span class="lineno"> 2361</span>&#160;</div><div class="line"><a name="l02362"></a><span class="lineno"> 2362</span>&#160;      T_CLUSTERIDX lcidx_Cs =</div><div class="line"><a name="l02363"></a><span class="lineno"> 2363</span>&#160;        <a class="code" href="namespacegaselect.html#ae9cfd02b23815a3c1291b4adb0b7658a">gaselect::getIdxRouletteWheel</a></div><div class="line"><a name="l02364"></a><span class="lineno"> 2364</span>&#160;        (lvectorrt_probDistRouletteWheel,</div><div class="line"><a name="l02365"></a><span class="lineno"> 2365</span>&#160;        T_CLUSTERIDX(0)</div><div class="line"><a name="l02366"></a><span class="lineno"> 2366</span>&#160;        );</div><div class="line"><a name="l02367"></a><span class="lineno"> 2367</span>&#160;      </div><div class="line"><a name="l02368"></a><span class="lineno"> 2368</span>&#160;      <span class="comment">/*END:</span></div><div class="line"><a name="l02369"></a><span class="lineno"> 2369</span>&#160;<span class="comment">        ALG_EAC_II_CLUSTERINGLABELVARK_ALVES_CAMPELLO_HRUSCHKA2006</span></div><div class="line"><a name="l02370"></a><span class="lineno"> 2370</span>&#160;<span class="comment">        ALG_FEAC_CLUSTERINGLABELVARK_ALVES_CAMPELLO_HRUSCHKA2006  </span></div><div class="line"><a name="l02371"></a><span class="lineno"> 2371</span>&#160;<span class="comment">      */</span></div><div class="line"><a name="l02372"></a><span class="lineno"> 2372</span>&#160;      </div><div class="line"><a name="l02373"></a><span class="lineno"> 2373</span>&#160;<span class="preprocessor">#else </span><span class="comment">/*BEGIN: ALG_EAC_CLUSTERINGLABELVARK_HRUSCHKA_CAMPELLO_CASTRO2006 || OTHER</span></div><div class="line"><a name="l02374"></a><span class="lineno"> 2374</span>&#160;<span class="comment">       */</span><span class="preprocessor"></span></div><div class="line"><a name="l02375"></a><span class="lineno"> 2375</span>&#160;</div><div class="line"><a name="l02376"></a><span class="lineno"> 2376</span>&#160;      <span class="comment">/*\cite{Hruschka:Campello:Castro:GAClusteringLabelKVar:EAC:2006}</span></div><div class="line"><a name="l02377"></a><span class="lineno"> 2377</span>&#160;<span class="comment">        EAC</span></div><div class="line"><a name="l02378"></a><span class="lineno"> 2378</span>&#160;<span class="comment">      */</span></div><div class="line"><a name="l02379"></a><span class="lineno"> 2379</span>&#160;      std::uniform_int_distribution&lt;T_CLUSTERIDX&gt; uniformdis_0K</div><div class="line"><a name="l02380"></a><span class="lineno"> 2380</span>&#160;        (0,(T_CLUSTERIDX ) aochromfeac_toMutate.getNumClusterK()-1);</div><div class="line"><a name="l02381"></a><span class="lineno"> 2381</span>&#160;</div><div class="line"><a name="l02382"></a><span class="lineno"> 2382</span>&#160;      T_CLUSTERIDX lcidx_Cs =</div><div class="line"><a name="l02383"></a><span class="lineno"> 2383</span>&#160;        uniformdis_0K(<a class="code" href="ga__clustering__operator_8hpp.html#acee5944d570f2fb7efdf1d4c801b30fb">gmt19937_eng</a>);</div><div class="line"><a name="l02384"></a><span class="lineno"> 2384</span>&#160;      </div><div class="line"><a name="l02385"></a><span class="lineno"> 2385</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*END: </span></div><div class="line"><a name="l02386"></a><span class="lineno"> 2386</span>&#160;<span class="comment">         ALG_EAC_CLUSTERINGLABELVARK_HRUSCHKA_CAMPELLO_CASTRO2006</span></div><div class="line"><a name="l02387"></a><span class="lineno"> 2387</span>&#160;<span class="comment">        */</span><span class="preprocessor"></span></div><div class="line"><a name="l02388"></a><span class="lineno"> 2388</span>&#160;</div><div class="line"><a name="l02389"></a><span class="lineno"> 2389</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l02390"></a><span class="lineno"> 2390</span>&#160;      <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l02391"></a><span class="lineno"> 2391</span>&#160;      std::cout &lt;&lt; lpc_labelFuncStep</div><div class="line"><a name="l02392"></a><span class="lineno"> 2392</span>&#160;                &lt;&lt; <span class="stringliteral">&quot;: OUT(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="charliteral">&#39;)&#39;</span></div><div class="line"><a name="l02393"></a><span class="lineno"> 2393</span>&#160;                &lt;&lt; <span class="stringliteral">&quot;\nCs = &quot;</span> &lt;&lt; lcidx_Cs</div><div class="line"><a name="l02394"></a><span class="lineno"> 2394</span>&#160;                &lt;&lt; std::endl; </div><div class="line"><a name="l02395"></a><span class="lineno"> 2395</span>&#160;    }</div><div class="line"><a name="l02396"></a><span class="lineno"> 2396</span>&#160;      --geiinparam_verbose;</div><div class="line"><a name="l02397"></a><span class="lineno"> 2397</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l02398"></a><span class="lineno"> 2398</span>&#160;    </div><div class="line"><a name="l02399"></a><span class="lineno"> 2399</span>&#160;    </div><div class="line"><a name="l02400"></a><span class="lineno"> 2400</span>&#160;    <span class="comment">// }  END 1.2.1</span></div><div class="line"><a name="l02401"></a><span class="lineno"> 2401</span>&#160;       </div><div class="line"><a name="l02402"></a><span class="lineno"> 2402</span>&#160;</div><div class="line"><a name="l02403"></a><span class="lineno"> 2403</span>&#160;      </div><div class="line"><a name="l02404"></a><span class="lineno"> 2404</span>&#160;      <span class="comment">/*1.2.2 Place the objects that belong to C_s into the</span></div><div class="line"><a name="l02405"></a><span class="lineno"> 2405</span>&#160;<span class="comment">        nearest remaining clusters C_j \in g, j \neq s,</span></div><div class="line"><a name="l02406"></a><span class="lineno"> 2406</span>&#160;<span class="comment">        according to the distances between objects</span></div><div class="line"><a name="l02407"></a><span class="lineno"> 2407</span>&#160;<span class="comment">        and cluster centroids (mean vectors of C_j);</span></div><div class="line"><a name="l02408"></a><span class="lineno"> 2408</span>&#160;<span class="comment">        C_s --&gt; C_j</span></div><div class="line"><a name="l02409"></a><span class="lineno"> 2409</span>&#160;<span class="comment">      */</span></div><div class="line"><a name="l02410"></a><span class="lineno"> 2410</span>&#160;      {<span class="comment">/*BEGIN 1.2.2</span></div><div class="line"><a name="l02411"></a><span class="lineno"> 2411</span>&#160;<span class="comment">        */</span></div><div class="line"><a name="l02412"></a><span class="lineno"> 2412</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l02413"></a><span class="lineno"> 2413</span>&#160;        <span class="keyword">const</span> <span class="keywordtype">char</span>* lpc_labelFuncStep = <span class="stringliteral">&quot;MO1 1.2.2 PLACE THE OBJECTS A CLUSTER CS&quot;</span>;</div><div class="line"><a name="l02414"></a><span class="lineno"> 2414</span>&#160;        ++geiinparam_verbose;</div><div class="line"><a name="l02415"></a><span class="lineno"> 2415</span>&#160;        <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l02416"></a><span class="lineno"> 2416</span>&#160;          std::cout &lt;&lt;  lpc_labelFuncStep</div><div class="line"><a name="l02417"></a><span class="lineno"> 2417</span>&#160;                    &lt;&lt; <span class="stringliteral">&quot;:  IN(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="charliteral">&#39;)&#39;</span></div><div class="line"><a name="l02418"></a><span class="lineno"> 2418</span>&#160;                    &lt;&lt; std::endl; </div><div class="line"><a name="l02419"></a><span class="lineno"> 2419</span>&#160;        }</div><div class="line"><a name="l02420"></a><span class="lineno"> 2420</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l02421"></a><span class="lineno"> 2421</span>&#160;</div><div class="line"><a name="l02422"></a><span class="lineno"> 2422</span>&#160;        std::vector&lt;T_INSTANCES_CLUSTER_K&gt;&amp; lvectorT_genotypeNumInstancesClusterK =</div><div class="line"><a name="l02423"></a><span class="lineno"> 2423</span>&#160;          aochromfeac_toMutate.getNumInstancesClusterK();</div><div class="line"><a name="l02424"></a><span class="lineno"> 2424</span>&#160;</div><div class="line"><a name="l02425"></a><span class="lineno"> 2425</span>&#160;        T_CLUSTERIDX lcidx_Cj =</div><div class="line"><a name="l02426"></a><span class="lineno"> 2426</span>&#160;          <a class="code" href="namespacenearest.html#ae11d0bb55d785136c13f44f2505fbe54">nearest::findTwoNearestCentroids</a></div><div class="line"><a name="l02427"></a><span class="lineno"> 2427</span>&#160;          (lcidx_Cs,</div><div class="line"><a name="l02428"></a><span class="lineno"> 2428</span>&#160;           lmatrixwrownull_genotypeCentroids,</div><div class="line"><a name="l02429"></a><span class="lineno"> 2429</span>&#160;           aifunc2p_dist</div><div class="line"><a name="l02430"></a><span class="lineno"> 2430</span>&#160;           );</div><div class="line"><a name="l02431"></a><span class="lineno"> 2431</span>&#160;      </div><div class="line"><a name="l02432"></a><span class="lineno"> 2432</span>&#160;        T_INSTANCES_CLUSTER_K lT_denominator = </div><div class="line"><a name="l02433"></a><span class="lineno"> 2433</span>&#160;          lvectorT_genotypeNumInstancesClusterK.at(lcidx_Cj) + </div><div class="line"><a name="l02434"></a><span class="lineno"> 2434</span>&#160;          lvectorT_genotypeNumInstancesClusterK.at(lcidx_Cs);</div><div class="line"><a name="l02435"></a><span class="lineno"> 2435</span>&#160;        </div><div class="line"><a name="l02436"></a><span class="lineno"> 2436</span>&#160;        <span class="keywordflow">if</span> ( lT_denominator != 0 ) {</div><div class="line"><a name="l02437"></a><span class="lineno"> 2437</span>&#160;</div><div class="line"><a name="l02438"></a><span class="lineno"> 2438</span>&#160;          <a class="code" href="namespaceinterfacesse.html#a144ebf70bf38495c3de1aca2c8365e08">interfacesse::scal</a></div><div class="line"><a name="l02439"></a><span class="lineno"> 2439</span>&#160;            (lmatrixwrownull_genotypeCentroids.<a class="code" href="classmat_1_1_matrix_with_row_null.html#ac74d2b769f581b11e7b125d2a8ab3f06">getRow</a>(lcidx_Cj),</div><div class="line"><a name="l02440"></a><span class="lineno"> 2440</span>&#160;             lvectorT_genotypeNumInstancesClusterK.at(lcidx_Cj),<span class="comment">//lT_beta,</span></div><div class="line"><a name="l02441"></a><span class="lineno"> 2441</span>&#160;             lmatrixwrownull_genotypeCentroids.<a class="code" href="classmat_1_1_matrix_base.html#a70200414022ce1479b9ddc16102b12ae">getNumColumns</a>()</div><div class="line"><a name="l02442"></a><span class="lineno"> 2442</span>&#160;             );</div><div class="line"><a name="l02443"></a><span class="lineno"> 2443</span>&#160;          </div><div class="line"><a name="l02444"></a><span class="lineno"> 2444</span>&#160;          <a class="code" href="namespaceinterfacesse.html#a9dd5fb43ad8a83ee5cb2f5ba1bb2085b">interfacesse::axpy</a></div><div class="line"><a name="l02445"></a><span class="lineno"> 2445</span>&#160;            (lmatrixwrownull_genotypeCentroids.<a class="code" href="classmat_1_1_matrix_with_row_null.html#ac74d2b769f581b11e7b125d2a8ab3f06">getRow</a>(lcidx_Cj),</div><div class="line"><a name="l02446"></a><span class="lineno"> 2446</span>&#160;             lvectorT_genotypeNumInstancesClusterK.at(lcidx_Cs),</div><div class="line"><a name="l02447"></a><span class="lineno"> 2447</span>&#160;             lmatrixwrownull_genotypeCentroids.<a class="code" href="classmat_1_1_matrix_with_row_null.html#ac74d2b769f581b11e7b125d2a8ab3f06">getRow</a>(lcidx_Cs),</div><div class="line"><a name="l02448"></a><span class="lineno"> 2448</span>&#160;             lmatrixwrownull_genotypeCentroids.<a class="code" href="classmat_1_1_matrix_base.html#a70200414022ce1479b9ddc16102b12ae">getNumColumns</a>()</div><div class="line"><a name="l02449"></a><span class="lineno"> 2449</span>&#160;             );</div><div class="line"><a name="l02450"></a><span class="lineno"> 2450</span>&#160;</div><div class="line"><a name="l02451"></a><span class="lineno"> 2451</span>&#160;          <a class="code" href="namespaceinterfacesse.html#a948123152e5a1224ca48861b25b6dc0e">interfacesse::scalInv</a></div><div class="line"><a name="l02452"></a><span class="lineno"> 2452</span>&#160;            (lmatrixwrownull_genotypeCentroids.<a class="code" href="classmat_1_1_matrix_with_row_null.html#ac74d2b769f581b11e7b125d2a8ab3f06">getRow</a>(lcidx_Cj),</div><div class="line"><a name="l02453"></a><span class="lineno"> 2453</span>&#160;             lT_denominator,</div><div class="line"><a name="l02454"></a><span class="lineno"> 2454</span>&#160;             lmatrixwrownull_genotypeCentroids.<a class="code" href="classmat_1_1_matrix_base.html#a70200414022ce1479b9ddc16102b12ae">getNumColumns</a>()</div><div class="line"><a name="l02455"></a><span class="lineno"> 2455</span>&#160;             );</div><div class="line"><a name="l02456"></a><span class="lineno"> 2456</span>&#160;          </div><div class="line"><a name="l02457"></a><span class="lineno"> 2457</span>&#160;          lvectorT_genotypeNumInstancesClusterK.at(lcidx_Cj) += </div><div class="line"><a name="l02458"></a><span class="lineno"> 2458</span>&#160;            lvectorT_genotypeNumInstancesClusterK.at(lcidx_Cs);</div><div class="line"><a name="l02459"></a><span class="lineno"> 2459</span>&#160;          </div><div class="line"><a name="l02460"></a><span class="lineno"> 2460</span>&#160;          std::vector&lt;uintidx&gt;  </div><div class="line"><a name="l02461"></a><span class="lineno"> 2461</span>&#160;            lvectorstidx_clustersKeep;</div><div class="line"><a name="l02462"></a><span class="lineno"> 2462</span>&#160;</div><div class="line"><a name="l02463"></a><span class="lineno"> 2463</span>&#160;          lvectorstidx_clustersKeep.reserve</div><div class="line"><a name="l02464"></a><span class="lineno"> 2464</span>&#160;            (lmatrixwrownull_genotypeCentroids.<a class="code" href="classmat_1_1_matrix_base.html#ac500eedd5e203327d3292f8ab22d8f3e">getNumRows</a>() - (<a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>) 1);</div><div class="line"><a name="l02465"></a><span class="lineno"> 2465</span>&#160;</div><div class="line"><a name="l02466"></a><span class="lineno"> 2466</span>&#160;          <span class="keywordflow">for</span> ( <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a> lui_k = 0; lui_k &lt; lmatrixwrownull_genotypeCentroids.<a class="code" href="classmat_1_1_matrix_base.html#ac500eedd5e203327d3292f8ab22d8f3e">getNumRows</a>(); lui_k++) </div><div class="line"><a name="l02467"></a><span class="lineno"> 2467</span>&#160;            </div><div class="line"><a name="l02468"></a><span class="lineno"> 2468</span>&#160;            <span class="keywordflow">if</span> ( lui_k != (<a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>) lcidx_Cs ) </div><div class="line"><a name="l02469"></a><span class="lineno"> 2469</span>&#160;              lvectorstidx_clustersKeep.push_back( lui_k );</div><div class="line"><a name="l02470"></a><span class="lineno"> 2470</span>&#160;</div><div class="line"><a name="l02471"></a><span class="lineno"> 2471</span>&#160;          <span class="comment">/*UPDATE LABELS</span></div><div class="line"><a name="l02472"></a><span class="lineno"> 2472</span>&#160;<span class="comment">           */</span></div><div class="line"><a name="l02473"></a><span class="lineno"> 2473</span>&#160;          <a class="code" href="namespacegaintegerop.html#ab3fdfa039ef172762476ee93b9b5e4f0">gaintegerop::oneChangelabel</a></div><div class="line"><a name="l02474"></a><span class="lineno"> 2474</span>&#160;            &lt;T_CLUSTERIDX,T_REAL&gt;</div><div class="line"><a name="l02475"></a><span class="lineno"> 2475</span>&#160;            (aochromfeac_toMutate,</div><div class="line"><a name="l02476"></a><span class="lineno"> 2476</span>&#160;             lcidx_Cs,</div><div class="line"><a name="l02477"></a><span class="lineno"> 2477</span>&#160;             lcidx_Cj</div><div class="line"><a name="l02478"></a><span class="lineno"> 2478</span>&#160;             );</div><div class="line"><a name="l02479"></a><span class="lineno"> 2479</span>&#160;</div><div class="line"><a name="l02480"></a><span class="lineno"> 2480</span>&#160;          <a class="code" href="namespacegaintegerop.html#ac5569129f257484a01a32fca9ef280cd">gaintegerop::labelKeep</a></div><div class="line"><a name="l02481"></a><span class="lineno"> 2481</span>&#160;            &lt;T_CLUSTERIDX,T_REAL&gt;</div><div class="line"><a name="l02482"></a><span class="lineno"> 2482</span>&#160;            (aochromfeac_toMutate,</div><div class="line"><a name="l02483"></a><span class="lineno"> 2483</span>&#160;             lvectorstidx_clustersKeep</div><div class="line"><a name="l02484"></a><span class="lineno"> 2484</span>&#160;             );</div><div class="line"><a name="l02485"></a><span class="lineno"> 2485</span>&#160;</div><div class="line"><a name="l02486"></a><span class="lineno"> 2486</span>&#160;          <span class="comment">/*DELETE CENTROIDE</span></div><div class="line"><a name="l02487"></a><span class="lineno"> 2487</span>&#160;<span class="comment">           */</span></div><div class="line"><a name="l02488"></a><span class="lineno"> 2488</span>&#160;          lmatrixwrownull_genotypeCentroids.<a class="code" href="classmat_1_1_matrix_with_row_null.html#a4e85c7751adcdd38783e163d5592d001">keepRows</a></div><div class="line"><a name="l02489"></a><span class="lineno"> 2489</span>&#160;            (lvectorstidx_clustersKeep);</div><div class="line"><a name="l02490"></a><span class="lineno"> 2490</span>&#160;</div><div class="line"><a name="l02491"></a><span class="lineno"> 2491</span>&#160;          lvectorT_genotypeNumInstancesClusterK.erase</div><div class="line"><a name="l02492"></a><span class="lineno"> 2492</span>&#160;            (lvectorT_genotypeNumInstancesClusterK.begin() + lcidx_Cs);</div><div class="line"><a name="l02493"></a><span class="lineno"> 2493</span>&#160;          lvectorrt_genotypePartialFcC.erase</div><div class="line"><a name="l02494"></a><span class="lineno"> 2494</span>&#160;            (lvectorrt_genotypePartialFcC.begin() + lcidx_Cs);</div><div class="line"><a name="l02495"></a><span class="lineno"> 2495</span>&#160;</div><div class="line"><a name="l02496"></a><span class="lineno"> 2496</span>&#160;          </div><div class="line"><a name="l02497"></a><span class="lineno"> 2497</span>&#160;</div><div class="line"><a name="l02498"></a><span class="lineno"> 2498</span>&#160;<span class="preprocessor">#ifdef __FITNESS_SIMPLIFIED_SILHOUETTE__</span></div><div class="line"><a name="l02499"></a><span class="lineno"> 2499</span>&#160;      </div><div class="line"><a name="l02500"></a><span class="lineno"> 2500</span>&#160;          <a class="code" href="classpartition_1_1_partition_label.html">partition::PartitionLabel</a></div><div class="line"><a name="l02501"></a><span class="lineno"> 2501</span>&#160;            &lt;T_CLUSTERIDX&gt;</div><div class="line"><a name="l02502"></a><span class="lineno"> 2502</span>&#160;            lpartition_clustersLabel</div><div class="line"><a name="l02503"></a><span class="lineno"> 2503</span>&#160;            (aochromfeac_toMutate.getString(),</div><div class="line"><a name="l02504"></a><span class="lineno"> 2504</span>&#160;             aochromfeac_toMutate.getStringSize(),</div><div class="line"><a name="l02505"></a><span class="lineno"> 2505</span>&#160;             aochromfeac_toMutate.getNumClusterK()</div><div class="line"><a name="l02506"></a><span class="lineno"> 2506</span>&#160;             );</div><div class="line"><a name="l02507"></a><span class="lineno"> 2507</span>&#160;</div><div class="line"><a name="l02508"></a><span class="lineno"> 2508</span>&#160;             std::vector&lt;T_REAL&gt;&amp;&amp;  lvectort_partialSilhouette =</div><div class="line"><a name="l02509"></a><span class="lineno"> 2509</span>&#160;               <a class="code" href="namespaceum.html#a1fa2ec9d0840e8dbfa3d2737a5615b11">um::simplifiedSilhouette</a></div><div class="line"><a name="l02510"></a><span class="lineno"> 2510</span>&#160;               (aochromfeac_toMutate.getCentroids(),</div><div class="line"><a name="l02511"></a><span class="lineno"> 2511</span>&#160;                aiiterator_instfirst,</div><div class="line"><a name="l02512"></a><span class="lineno"> 2512</span>&#160;                aiiterator_instlast,</div><div class="line"><a name="l02513"></a><span class="lineno"> 2513</span>&#160;                lpartition_clustersLabel,</div><div class="line"><a name="l02514"></a><span class="lineno"> 2514</span>&#160;                aochromfeac_toMutate.getNumInstancesClusterK(),</div><div class="line"><a name="l02515"></a><span class="lineno"> 2515</span>&#160;                aifunc2p_dist</div><div class="line"><a name="l02516"></a><span class="lineno"> 2516</span>&#160;                );</div><div class="line"><a name="l02517"></a><span class="lineno"> 2517</span>&#160;           </div><div class="line"><a name="l02518"></a><span class="lineno"> 2518</span>&#160;</div><div class="line"><a name="l02519"></a><span class="lineno"> 2519</span>&#160;                T_REAL lmetrict_partialSilhouette = </div><div class="line"><a name="l02520"></a><span class="lineno"> 2520</span>&#160;                  <a class="code" href="namespaceinterfacesse.html#a25f6950d589b92fd5bcf2007fb3fae19">interfacesse::sum</a></div><div class="line"><a name="l02521"></a><span class="lineno"> 2521</span>&#160;                  (lvectort_partialSilhouette.data(),</div><div class="line"><a name="l02522"></a><span class="lineno"> 2522</span>&#160;                   (<a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>) lvectort_partialSilhouette.size()</div><div class="line"><a name="l02523"></a><span class="lineno"> 2523</span>&#160;                   );</div><div class="line"><a name="l02524"></a><span class="lineno"> 2524</span>&#160;</div><div class="line"><a name="l02525"></a><span class="lineno"> 2525</span>&#160;                lmetrict_partialSilhouette /= (T_REAL) lvectort_partialSilhouette.size();</div><div class="line"><a name="l02526"></a><span class="lineno"> 2526</span>&#160;</div><div class="line"><a name="l02527"></a><span class="lineno"> 2527</span>&#160;                aochromfeac_toMutate.setPartialFcC(lvectort_partialSilhouette);</div><div class="line"><a name="l02528"></a><span class="lineno"> 2528</span>&#160;                </div><div class="line"><a name="l02529"></a><span class="lineno"> 2529</span>&#160;                aochromfeac_toMutate.setObjetiveFunc(lmetrict_partialSilhouette);</div><div class="line"><a name="l02530"></a><span class="lineno"> 2530</span>&#160;                </div><div class="line"><a name="l02531"></a><span class="lineno"> 2531</span>&#160;</div><div class="line"><a name="l02532"></a><span class="lineno"> 2532</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__FITNESS_SIMPLIFIED_SILHOUETTE__*/</span><span class="preprocessor"></span></div><div class="line"><a name="l02533"></a><span class="lineno"> 2533</span>&#160;      </div><div class="line"><a name="l02534"></a><span class="lineno"> 2534</span>&#160;        </div><div class="line"><a name="l02535"></a><span class="lineno"> 2535</span>&#160;        } <span class="comment">/*End if*/</span></div><div class="line"><a name="l02536"></a><span class="lineno"> 2536</span>&#160;        </div><div class="line"><a name="l02537"></a><span class="lineno"> 2537</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l02538"></a><span class="lineno"> 2538</span>&#160;          <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l02539"></a><span class="lineno"> 2539</span>&#160;            std::cout &lt;&lt; lpc_labelFuncStep</div><div class="line"><a name="l02540"></a><span class="lineno"> 2540</span>&#160;                      &lt;&lt; <span class="stringliteral">&quot;: OUT(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="stringliteral">&quot;)\n&quot;</span>;</div><div class="line"><a name="l02541"></a><span class="lineno"> 2541</span>&#160;            std::ostringstream lostrstream_labelSubStep;</div><div class="line"><a name="l02542"></a><span class="lineno"> 2542</span>&#160;            lostrstream_labelSubStep &lt;&lt; geverbosepc_labelstep</div><div class="line"><a name="l02543"></a><span class="lineno"> 2543</span>&#160;                                     &lt;&lt; <span class="charliteral">&#39;:&#39;</span> &lt;&lt; lpc_labelFunc       </div><div class="line"><a name="l02544"></a><span class="lineno"> 2544</span>&#160;                                     &lt;&lt; <span class="charliteral">&#39;:&#39;</span> &lt;&lt; lpc_labelFuncStep;  <span class="comment">//&quot;:1.2.2 PLACE THE OBJECTS A CLUSTER CS&quot;;</span></div><div class="line"><a name="l02545"></a><span class="lineno"> 2545</span>&#160;            aochromfeac_toMutate.print(std::cout,lostrstream_labelSubStep.str().c_str(),<span class="charliteral">&#39;,&#39;</span>,<span class="charliteral">&#39;;&#39;</span>);</div><div class="line"><a name="l02546"></a><span class="lineno"> 2546</span>&#160;          }</div><div class="line"><a name="l02547"></a><span class="lineno"> 2547</span>&#160;          --geiinparam_verbose;</div><div class="line"><a name="l02548"></a><span class="lineno"> 2548</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l02549"></a><span class="lineno"> 2549</span>&#160;        </div><div class="line"><a name="l02550"></a><span class="lineno"> 2550</span>&#160;      } <span class="comment">/*END 1.2.2</span></div><div class="line"><a name="l02551"></a><span class="lineno"> 2551</span>&#160;<span class="comment">         */</span></div><div class="line"><a name="l02552"></a><span class="lineno"> 2552</span>&#160;    } <span class="comment">/*End for*/</span></div><div class="line"><a name="l02553"></a><span class="lineno"> 2553</span>&#160;    </div><div class="line"><a name="l02554"></a><span class="lineno"> 2554</span>&#160;  } <span class="comment">/*Else g is not mutated*/</span></div><div class="line"><a name="l02555"></a><span class="lineno"> 2555</span>&#160;</div><div class="line"><a name="l02556"></a><span class="lineno"> 2556</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l02557"></a><span class="lineno"> 2557</span>&#160;  <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l02558"></a><span class="lineno"> 2558</span>&#160;    std::cout &lt;&lt; lpc_labelFunc</div><div class="line"><a name="l02559"></a><span class="lineno"> 2559</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;: OUT(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="charliteral">&#39;)&#39;</span></div><div class="line"><a name="l02560"></a><span class="lineno"> 2560</span>&#160;              &lt;&lt; <span class="stringliteral">&quot; K = &quot;</span> &lt;&lt; aochromfeac_toMutate.getNumClusterK() &lt;&lt; <span class="charliteral">&#39;\n&#39;</span>;        </div><div class="line"><a name="l02561"></a><span class="lineno"> 2561</span>&#160;    aochromfeac_toMutate.print(std::cout,lpc_labelFunc,<span class="charliteral">&#39;,&#39;</span>,<span class="charliteral">&#39;;&#39;</span>);</div><div class="line"><a name="l02562"></a><span class="lineno"> 2562</span>&#160;  }</div><div class="line"><a name="l02563"></a><span class="lineno"> 2563</span>&#160;  --geiinparam_verbose;</div><div class="line"><a name="l02564"></a><span class="lineno"> 2564</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l02565"></a><span class="lineno"> 2565</span>&#160;</div><div class="line"><a name="l02566"></a><span class="lineno"> 2566</span>&#160;} <span class="comment">/*END MO1</span></div><div class="line"><a name="l02567"></a><span class="lineno"> 2567</span>&#160;<span class="comment">   */</span></div><div class="line"><a name="l02568"></a><span class="lineno"> 2568</span>&#160;</div><div class="line"><a name="l02569"></a><span class="lineno"> 2569</span>&#160;  </div><div class="line"><a name="l02580"></a><span class="lineno"> 2580</span>&#160;<span class="keyword">template</span> &lt;<span class="keyword">typename</span> T_CLUSTERIDX,</div><div class="line"><a name="l02581"></a><span class="lineno"> 2581</span>&#160;          <span class="keyword">typename</span> T_REAL, <span class="comment">//DATA TYPE OBJETIVE FUNCTION AND T_FITNESS, </span></div><div class="line"><a name="l02582"></a><span class="lineno"> 2582</span>&#160;          <span class="keyword">typename</span> T_FEATURE,</div><div class="line"><a name="l02583"></a><span class="lineno"> 2583</span>&#160;          <span class="keyword">typename</span> T_FEATURE_SUM,</div><div class="line"><a name="l02584"></a><span class="lineno"> 2584</span>&#160;          <span class="keyword">typename</span> T_INSTANCES_CLUSTER_K,</div><div class="line"><a name="l02585"></a><span class="lineno"> 2585</span>&#160;          <span class="keyword">typename</span> INPUT_ITERATOR</div><div class="line"><a name="l02586"></a><span class="lineno"> 2586</span>&#160;          &gt;</div><div class="line"><a name="l02587"></a><span class="lineno"> 2587</span>&#160;<span class="keywordtype">void</span></div><div class="line"><a name="l02588"></a><span class="lineno"> 2588</span>&#160;<a class="code" href="namespacegaclusteringop.html#a3c99bd6485c6e3a0daf93aa53a97edb9">MO2</a></div><div class="line"><a name="l02589"></a><span class="lineno"><a class="line" href="namespacegaclusteringop.html#a90288f6cdf4cbf406d1d5a71080adff1"> 2589</a></span>&#160;(<a class="code" href="classgaencode_1_1_chromosome_f_e_a_c.html">gaencode::ChromosomeFEAC</a></div><div class="line"><a name="l02590"></a><span class="lineno"> 2590</span>&#160; &lt;T_CLUSTERIDX,</div><div class="line"><a name="l02591"></a><span class="lineno"> 2591</span>&#160; T_REAL,</div><div class="line"><a name="l02592"></a><span class="lineno"> 2592</span>&#160; T_FEATURE,</div><div class="line"><a name="l02593"></a><span class="lineno"> 2593</span>&#160; T_FEATURE_SUM,</div><div class="line"><a name="l02594"></a><span class="lineno"> 2594</span>&#160; T_INSTANCES_CLUSTER_K&gt;         &amp;aochromfeac_toMutate,</div><div class="line"><a name="l02595"></a><span class="lineno"> 2595</span>&#160; INPUT_ITERATOR                 aiiterator_instfirst,</div><div class="line"><a name="l02596"></a><span class="lineno"> 2596</span>&#160; <span class="keyword">const</span> INPUT_ITERATOR           aiiterator_instlast,</div><div class="line"><a name="l02597"></a><span class="lineno"> 2597</span>&#160; <a class="code" href="structdist_1_1_dist.html">dist::Dist&lt;T_REAL,T_FEATURE&gt;</a>   &amp;aifunc2p_dist</div><div class="line"><a name="l02598"></a><span class="lineno"> 2598</span>&#160; )</div><div class="line"><a name="l02599"></a><span class="lineno"> 2599</span>&#160;{</div><div class="line"><a name="l02600"></a><span class="lineno"> 2600</span>&#160;  <span class="keyword">const</span> <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>  lui_numInstances =</div><div class="line"><a name="l02601"></a><span class="lineno"> 2601</span>&#160;    <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>(std::distance(aiiterator_instfirst,aiiterator_instlast));</div><div class="line"><a name="l02602"></a><span class="lineno"> 2602</span>&#160;  </div><div class="line"><a name="l02603"></a><span class="lineno"> 2603</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l02604"></a><span class="lineno"> 2604</span>&#160;  <span class="keyword">const</span> <span class="keywordtype">char</span>* lpc_labelFunc = <span class="stringliteral">&quot;gaclusteringop::MO2&quot;</span>;</div><div class="line"><a name="l02605"></a><span class="lineno"> 2605</span>&#160;  ++geiinparam_verbose;</div><div class="line"><a name="l02606"></a><span class="lineno"> 2606</span>&#160;  <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l02607"></a><span class="lineno"> 2607</span>&#160;    std::cout &lt;&lt; lpc_labelFunc </div><div class="line"><a name="l02608"></a><span class="lineno"> 2608</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;:  IN(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="charliteral">&#39;)&#39;</span></div><div class="line"><a name="l02609"></a><span class="lineno"> 2609</span>&#160;              &lt;&lt; <span class="stringliteral">&quot; K = &quot;</span> &lt;&lt; aochromfeac_toMutate.getNumClusterK()</div><div class="line"><a name="l02610"></a><span class="lineno"> 2610</span>&#160;              &lt;&lt; <span class="stringliteral">&quot; fitness = &quot;</span> &lt;&lt;  aochromfeac_toMutate.getFitness()</div><div class="line"><a name="l02611"></a><span class="lineno"> 2611</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;\n(output gaencode::ChromosomeFEAC&lt;&gt;&amp;: aochromfeac_toMutate[&quot;</span></div><div class="line"><a name="l02612"></a><span class="lineno"> 2612</span>&#160;              &lt;&lt; geverboseui_idproc &lt;&lt; <span class="charliteral">&#39;:&#39;</span>&lt;&lt;  &amp;aochromfeac_toMutate &lt;&lt; <span class="charliteral">&#39;]&#39;</span></div><div class="line"><a name="l02613"></a><span class="lineno"> 2613</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;\n input  dist::Dist&lt;T_REAL,T_FEATURE&gt; &amp;aifunc2p_dist[&quot;</span> </div><div class="line"><a name="l02614"></a><span class="lineno"> 2614</span>&#160;              &lt;&lt; &amp;aifunc2p_dist &lt;&lt; <span class="charliteral">&#39;]&#39;</span></div><div class="line"><a name="l02615"></a><span class="lineno"> 2615</span>&#160;              &lt;&lt;  <span class="stringliteral">&quot;\n)&quot;</span></div><div class="line"><a name="l02616"></a><span class="lineno"> 2616</span>&#160;              &lt;&lt; std::endl;</div><div class="line"><a name="l02617"></a><span class="lineno"> 2617</span>&#160;  }</div><div class="line"><a name="l02618"></a><span class="lineno"> 2618</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l02619"></a><span class="lineno"> 2619</span>&#160;</div><div class="line"><a name="l02620"></a><span class="lineno"> 2620</span>&#160;  std::uniform_real_distribution&lt;T_REAL&gt; uniformdis_real01(0, 1);</div><div class="line"><a name="l02621"></a><span class="lineno"> 2621</span>&#160;  </div><div class="line"><a name="l02622"></a><span class="lineno"> 2622</span>&#160;  <a class="code" href="classmat_1_1_matrix_with_row_null.html">mat::MatrixWithRowNull&lt;T_FEATURE&gt;</a> &amp;lmatrixwrownull_genotypeCentroids =  </div><div class="line"><a name="l02623"></a><span class="lineno"> 2623</span>&#160;    aochromfeac_toMutate.getCentroids();</div><div class="line"><a name="l02624"></a><span class="lineno"> 2624</span>&#160;  std::vector&lt;T_INSTANCES_CLUSTER_K&gt;&amp; lvectorit_genotypeNumInstClusterK =</div><div class="line"><a name="l02625"></a><span class="lineno"> 2625</span>&#160;    aochromfeac_toMutate.getNumInstancesClusterK();</div><div class="line"><a name="l02626"></a><span class="lineno"> 2626</span>&#160;  std::vector&lt;T_REAL&gt;&amp; lvectorrt_genotypePartialFcC =</div><div class="line"><a name="l02627"></a><span class="lineno"> 2627</span>&#160;    aochromfeac_toMutate.getPartialFcC();</div><div class="line"><a name="l02628"></a><span class="lineno"> 2628</span>&#160;</div><div class="line"><a name="l02629"></a><span class="lineno"> 2629</span>&#160;  <span class="comment">/*1. Randomly generate a number n \in {1,..., kg};</span></div><div class="line"><a name="l02630"></a><span class="lineno"> 2630</span>&#160;<span class="comment">   */</span></div><div class="line"><a name="l02631"></a><span class="lineno"> 2631</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l02632"></a><span class="lineno"> 2632</span>&#160;  ++geiinparam_verbose;</div><div class="line"><a name="l02633"></a><span class="lineno"> 2633</span>&#160;  <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l02634"></a><span class="lineno"> 2634</span>&#160;    std::cout &lt;&lt; <span class="stringliteral">&quot;MO2 1. RANDOMLY GENERATE A NUMBER n in {1,...,k_g}:  IN&quot;</span></div><div class="line"><a name="l02635"></a><span class="lineno"> 2635</span>&#160;              &lt;&lt; <span class="charliteral">&#39;(&#39;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="charliteral">&#39;)&#39;</span></div><div class="line"><a name="l02636"></a><span class="lineno"> 2636</span>&#160;              &lt;&lt; std::endl; </div><div class="line"><a name="l02637"></a><span class="lineno"> 2637</span>&#160;  }</div><div class="line"><a name="l02638"></a><span class="lineno"> 2638</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l02639"></a><span class="lineno"> 2639</span>&#160;  </div><div class="line"><a name="l02640"></a><span class="lineno"> 2640</span>&#160;  std::uniform_int_distribution&lt;uintidx&gt; uniformdis_ui1N</div><div class="line"><a name="l02641"></a><span class="lineno"> 2641</span>&#160;    (1, lmatrixwrownull_genotypeCentroids.<a class="code" href="classmat_1_1_matrix_base.html#ac500eedd5e203327d3292f8ab22d8f3e">getNumRows</a>());</div><div class="line"><a name="l02642"></a><span class="lineno"> 2642</span>&#160;</div><div class="line"><a name="l02643"></a><span class="lineno"> 2643</span>&#160;  <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a> luintidx_n = uniformdis_ui1N(<a class="code" href="ga__clustering__operator_8hpp.html#acee5944d570f2fb7efdf1d4c801b30fb">gmt19937_eng</a>); </div><div class="line"><a name="l02644"></a><span class="lineno"> 2644</span>&#160;    </div><div class="line"><a name="l02645"></a><span class="lineno"> 2645</span>&#160;</div><div class="line"><a name="l02646"></a><span class="lineno"> 2646</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l02647"></a><span class="lineno"> 2647</span>&#160;  <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l02648"></a><span class="lineno"> 2648</span>&#160;    std::cout &lt;&lt; <span class="stringliteral">&quot;MO2 1. RANDOMLY GENERATE A NUMBER n in {1,...,k_g}: OUT&quot;</span></div><div class="line"><a name="l02649"></a><span class="lineno"> 2649</span>&#160;              &lt;&lt; <span class="charliteral">&#39;(&#39;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="charliteral">&#39;)&#39;</span></div><div class="line"><a name="l02650"></a><span class="lineno"> 2650</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;\nn = &quot;</span> &lt;&lt; luintidx_n &lt;&lt; <span class="stringliteral">&quot; in {1,...,&quot;</span></div><div class="line"><a name="l02651"></a><span class="lineno"> 2651</span>&#160;              &lt;&lt; lmatrixwrownull_genotypeCentroids.<a class="code" href="classmat_1_1_matrix_base.html#ac500eedd5e203327d3292f8ab22d8f3e">getNumRows</a>() &lt;&lt; <span class="charliteral">&#39;}&#39;</span></div><div class="line"><a name="l02652"></a><span class="lineno"> 2652</span>&#160;              &lt;&lt; std::endl; </div><div class="line"><a name="l02653"></a><span class="lineno"> 2653</span>&#160;  }</div><div class="line"><a name="l02654"></a><span class="lineno"> 2654</span>&#160;  --geiinparam_verbose;</div><div class="line"><a name="l02655"></a><span class="lineno"> 2655</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l02656"></a><span class="lineno"> 2656</span>&#160; </div><div class="line"><a name="l02657"></a><span class="lineno"> 2657</span>&#160;</div><div class="line"><a name="l02658"></a><span class="lineno"> 2658</span>&#160;  <span class="comment">/*2. For i = (1,...,n) do:</span></div><div class="line"><a name="l02659"></a><span class="lineno"> 2659</span>&#160;<span class="comment">   */</span></div><div class="line"><a name="l02660"></a><span class="lineno"> 2660</span>&#160;  <span class="keywordflow">for</span> (<a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a> lui_i = 1; lui_i &lt;= luintidx_n; lui_i++) {</div><div class="line"><a name="l02661"></a><span class="lineno"> 2661</span>&#160;</div><div class="line"><a name="l02662"></a><span class="lineno"> 2662</span>&#160;    </div><div class="line"><a name="l02663"></a><span class="lineno"> 2663</span>&#160;    <span class="comment">/*2.1 Randomly choose a cluster Cs encoded into g;</span></div><div class="line"><a name="l02664"></a><span class="lineno"> 2664</span>&#160;<span class="comment">     */</span></div><div class="line"><a name="l02665"></a><span class="lineno"> 2665</span>&#160;    </div><div class="line"><a name="l02666"></a><span class="lineno"> 2666</span>&#160;</div><div class="line"><a name="l02667"></a><span class="lineno"> 2667</span>&#160;<span class="preprocessor">#if defined(ALG_EAC_I_CLUSTERINGLABELVARK_ALVES_CAMPELLO_HRUSCHKA2006) || \</span></div><div class="line"><a name="l02668"></a><span class="lineno"> 2668</span>&#160;<span class="preprocessor">  defined(ALG_EAC_III_CLUSTERINGLABELVARK_ALVES_CAMPELLO_HRUSCHKA2006)</span></div><div class="line"><a name="l02669"></a><span class="lineno"> 2669</span>&#160;</div><div class="line"><a name="l02670"></a><span class="lineno"> 2670</span>&#160;    <span class="comment">/*\cite{Alves:etal:GAclusteringLabelKVar:FEAC:2006}</span></div><div class="line"><a name="l02671"></a><span class="lineno"> 2671</span>&#160;<span class="comment">      EAC-I</span></div><div class="line"><a name="l02672"></a><span class="lineno"> 2672</span>&#160;<span class="comment">      EAC-III</span></div><div class="line"><a name="l02673"></a><span class="lineno"> 2673</span>&#160;<span class="comment">    */</span></div><div class="line"><a name="l02674"></a><span class="lineno"> 2674</span>&#160;</div><div class="line"><a name="l02675"></a><span class="lineno"> 2675</span>&#160;    <span class="comment">/*Alternatively, it is possible to use information concerning</span></div><div class="line"><a name="l02676"></a><span class="lineno"> 2676</span>&#160;<span class="comment">      the quality of the clusters to select them for mutation. Our</span></div><div class="line"><a name="l02677"></a><span class="lineno"> 2677</span>&#160;<span class="comment">      first proposal to enhance the EAC goes into this direction,</span></div><div class="line"><a name="l02678"></a><span class="lineno"> 2678</span>&#160;<span class="comment">    </span></div><div class="line"><a name="l02679"></a><span class="lineno"> 2679</span>&#160;<span class="comment">      basically changing the way in which the EAC mutation</span></div><div class="line"><a name="l02680"></a><span class="lineno"> 2680</span>&#160;<span class="comment">      operators are applied (step 6 in Fig. 5). Particularly, we</span></div><div class="line"><a name="l02681"></a><span class="lineno"> 2681</span>&#160;<span class="comment">      hypothesize that the better the cluster the smaller should be</span></div><div class="line"><a name="l02682"></a><span class="lineno"> 2682</span>&#160;<span class="comment">      its probability of being mutated.Thus, good clusters tend to</span></div><div class="line"><a name="l02683"></a><span class="lineno"> 2683</span>&#160;<span class="comment">      be maintained during the evolutionary process, whereas bad</span></div><div class="line"><a name="l02684"></a><span class="lineno"> 2684</span>&#160;<span class="comment">      clusters are more likely to be mutated, hopefully towards</span></div><div class="line"><a name="l02685"></a><span class="lineno"> 2685</span>&#160;<span class="comment">      improving the partition encoded into the genotype.</span></div><div class="line"><a name="l02686"></a><span class="lineno"> 2686</span>&#160;<span class="comment"></span></div><div class="line"><a name="l02687"></a><span class="lineno"> 2687</span>&#160;<span class="comment">      In addition, let us consider that f_c(C_i) can be normalized</span></div><div class="line"><a name="l02688"></a><span class="lineno"> 2688</span>&#160;<span class="comment">      within the interval [0,1], which is precisely the case when</span></div><div class="line"><a name="l02689"></a><span class="lineno"> 2689</span>&#160;<span class="comment">      using the fitness functions to be described in Section IV.</span></div><div class="line"><a name="l02690"></a><span class="lineno"> 2690</span>&#160;<span class="comment">    */</span></div><div class="line"><a name="l02691"></a><span class="lineno"> 2691</span>&#160;    </div><div class="line"><a name="l02692"></a><span class="lineno"> 2692</span>&#160;    std::vector&lt;T_REAL&gt; lvectorT_partialFcCNorma01(lvectorrt_genotypePartialFcC.size(),1);</div><div class="line"><a name="l02693"></a><span class="lineno"> 2693</span>&#160;    <span class="comment">/*1 - fc(Ci)</span></div><div class="line"><a name="l02694"></a><span class="lineno"> 2694</span>&#160;<span class="comment">     */</span></div><div class="line"><a name="l02695"></a><span class="lineno"> 2695</span>&#160;    <a class="code" href="namespaceinterfacesse.html#a9dd5fb43ad8a83ee5cb2f5ba1bb2085b">interfacesse::axpy</a></div><div class="line"><a name="l02696"></a><span class="lineno"> 2696</span>&#160;      (lvectorT_partialFcCNorma01.data(),</div><div class="line"><a name="l02697"></a><span class="lineno"> 2697</span>&#160;       -1.0,</div><div class="line"><a name="l02698"></a><span class="lineno"> 2698</span>&#160;       lvectorrt_genotypePartialFcC.data(),</div><div class="line"><a name="l02699"></a><span class="lineno"> 2699</span>&#160;       (<a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>) lvectorT_partialFcCNorma01.size()</div><div class="line"><a name="l02700"></a><span class="lineno"> 2700</span>&#160;       );</div><div class="line"><a name="l02701"></a><span class="lineno"> 2701</span>&#160;    <span class="comment">/* / \sum(1-fc(Ci))</span></div><div class="line"><a name="l02702"></a><span class="lineno"> 2702</span>&#160;<span class="comment">     */</span></div><div class="line"><a name="l02703"></a><span class="lineno"> 2703</span>&#160;    T_REAL lrt_sum1_fc =</div><div class="line"><a name="l02704"></a><span class="lineno"> 2704</span>&#160;      <a class="code" href="namespaceinterfacesse.html#a25f6950d589b92fd5bcf2007fb3fae19">interfacesse::sum</a></div><div class="line"><a name="l02705"></a><span class="lineno"> 2705</span>&#160;      (lvectorT_partialFcCNorma01.data(),</div><div class="line"><a name="l02706"></a><span class="lineno"> 2706</span>&#160;       (<a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>) lvectorT_partialFcCNorma01.size()</div><div class="line"><a name="l02707"></a><span class="lineno"> 2707</span>&#160;       );</div><div class="line"><a name="l02708"></a><span class="lineno"> 2708</span>&#160;    lrt_sum1_fc = 1.0 / lrt_sum1_fc;</div><div class="line"><a name="l02709"></a><span class="lineno"> 2709</span>&#160;  </div><div class="line"><a name="l02710"></a><span class="lineno"> 2710</span>&#160;    <a class="code" href="namespaceinterfacesse.html#a144ebf70bf38495c3de1aca2c8365e08">interfacesse::scal</a></div><div class="line"><a name="l02711"></a><span class="lineno"> 2711</span>&#160;      (lvectorT_partialFcCNorma01.data(),</div><div class="line"><a name="l02712"></a><span class="lineno"> 2712</span>&#160;       lrt_sum1_fc,</div><div class="line"><a name="l02713"></a><span class="lineno"> 2713</span>&#160;       (<a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>) lvectorT_partialFcCNorma01.size()</div><div class="line"><a name="l02714"></a><span class="lineno"> 2714</span>&#160;       );</div><div class="line"><a name="l02715"></a><span class="lineno"> 2715</span>&#160;</div><div class="line"><a name="l02716"></a><span class="lineno"> 2716</span>&#160;    std::vector&lt;T_REAL&gt;&amp;&amp; lvectorrt_probDistRouletteWheel =</div><div class="line"><a name="l02717"></a><span class="lineno"> 2717</span>&#160;      <a class="code" href="namespaceprob.html#aa737d76e6416a765f004cd211eff712d">prob::makeDistRouletteWheel</a></div><div class="line"><a name="l02718"></a><span class="lineno"> 2718</span>&#160;      (lvectorT_partialFcCNorma01.begin(),</div><div class="line"><a name="l02719"></a><span class="lineno"> 2719</span>&#160;       lvectorT_partialFcCNorma01.end(),</div><div class="line"><a name="l02720"></a><span class="lineno"> 2720</span>&#160;       [](<span class="keyword">const</span> T_REAL&amp; lt_metrici) -&gt; T_REAL</div><div class="line"><a name="l02721"></a><span class="lineno"> 2721</span>&#160;       {</div><div class="line"><a name="l02722"></a><span class="lineno"> 2722</span>&#160;         <span class="keywordflow">return</span> lt_metrici;</div><div class="line"><a name="l02723"></a><span class="lineno"> 2723</span>&#160;       }</div><div class="line"><a name="l02724"></a><span class="lineno"> 2724</span>&#160;       );</div><div class="line"><a name="l02725"></a><span class="lineno"> 2725</span>&#160;   </div><div class="line"><a name="l02726"></a><span class="lineno"> 2726</span>&#160;    T_CLUSTERIDX lcidx_Cs = </div><div class="line"><a name="l02727"></a><span class="lineno"> 2727</span>&#160;      <a class="code" href="namespacegaselect.html#ae9cfd02b23815a3c1291b4adb0b7658a">gaselect::getIdxRouletteWheel</a></div><div class="line"><a name="l02728"></a><span class="lineno"> 2728</span>&#160;      (lvectorrt_probDistRouletteWheel,</div><div class="line"><a name="l02729"></a><span class="lineno"> 2729</span>&#160;       T_CLUSTERIDX(0)</div><div class="line"><a name="l02730"></a><span class="lineno"> 2730</span>&#160;       );</div><div class="line"><a name="l02731"></a><span class="lineno"> 2731</span>&#160;      </div><div class="line"><a name="l02732"></a><span class="lineno"> 2732</span>&#160;    <span class="comment">/*ALG_EAC_I_CLUSTERINGLABELVARK_ALVES_CAMPELLO_HRUSCHKA2006</span></div><div class="line"><a name="l02733"></a><span class="lineno"> 2733</span>&#160;<span class="comment">      ALG_EAC_III_CLUSTERINGLABELVARK_ALVES_CAMPELLO_HRUSCHKA2006</span></div><div class="line"><a name="l02734"></a><span class="lineno"> 2734</span>&#160;<span class="comment">    */</span></div><div class="line"><a name="l02735"></a><span class="lineno"> 2735</span>&#160; </div><div class="line"><a name="l02736"></a><span class="lineno"> 2736</span>&#160;<span class="preprocessor">#elif defined(ALG_EAC_II_CLUSTERINGLABELVARK_ALVES_CAMPELLO_HRUSCHKA2006) || \</span></div><div class="line"><a name="l02737"></a><span class="lineno"> 2737</span>&#160;<span class="preprocessor">  defined(ALG_FEAC_CLUSTERINGLABELVARK_ALVES_CAMPELLO_HRUSCHKA2006)</span></div><div class="line"><a name="l02738"></a><span class="lineno"> 2738</span>&#160;</div><div class="line"><a name="l02739"></a><span class="lineno"> 2739</span>&#160;    <span class="comment">/*\cite{Alves:etal:GAclusteringLabelKVar:FEAC:2006}</span></div><div class="line"><a name="l02740"></a><span class="lineno"> 2740</span>&#160;<span class="comment">      EAC-II</span></div><div class="line"><a name="l02741"></a><span class="lineno"> 2741</span>&#160;<span class="comment">      F-EAC</span></div><div class="line"><a name="l02742"></a><span class="lineno"> 2742</span>&#160;<span class="comment">    */</span></div><div class="line"><a name="l02743"></a><span class="lineno"> 2743</span>&#160;</div><div class="line"><a name="l02744"></a><span class="lineno"> 2744</span>&#160;    std::vector&lt;T_REAL&gt;&amp;&amp; lvectorT_partialFcCLinearNorm =</div><div class="line"><a name="l02745"></a><span class="lineno"> 2745</span>&#160;      <a class="code" href="namespaceprob.html#a35475d12404b2fbba2919682ad81f85d">prob::linearNormalization</a></div><div class="line"><a name="l02746"></a><span class="lineno"> 2746</span>&#160;      (lvectorrt_genotypePartialFcC.begin(),</div><div class="line"><a name="l02747"></a><span class="lineno"> 2747</span>&#160;       lvectorrt_genotypePartialFcC.end(),</div><div class="line"><a name="l02748"></a><span class="lineno"> 2748</span>&#160;       [](<span class="keyword">const</span> T_REAL&amp; lt_metrici) -&gt; T_REAL</div><div class="line"><a name="l02749"></a><span class="lineno"> 2749</span>&#160;       {</div><div class="line"><a name="l02750"></a><span class="lineno"> 2750</span>&#160;         <span class="keywordflow">return</span> lt_metrici;</div><div class="line"><a name="l02751"></a><span class="lineno"> 2751</span>&#160;       }</div><div class="line"><a name="l02752"></a><span class="lineno"> 2752</span>&#160;       );</div><div class="line"><a name="l02753"></a><span class="lineno"> 2753</span>&#160;</div><div class="line"><a name="l02754"></a><span class="lineno"> 2754</span>&#160;    std::vector&lt;T_REAL&gt;&amp;&amp; lvectorrt_probDistRouletteWheel =</div><div class="line"><a name="l02755"></a><span class="lineno"> 2755</span>&#160;      <a class="code" href="namespaceprob.html#aa737d76e6416a765f004cd211eff712d">prob::makeDistRouletteWheel</a></div><div class="line"><a name="l02756"></a><span class="lineno"> 2756</span>&#160;      (lvectorT_partialFcCLinearNorm.begin(),</div><div class="line"><a name="l02757"></a><span class="lineno"> 2757</span>&#160;       lvectorT_partialFcCLinearNorm.end(),</div><div class="line"><a name="l02758"></a><span class="lineno"> 2758</span>&#160;       [](<span class="keyword">const</span> T_REAL&amp; lt_metrici) -&gt; T_REAL</div><div class="line"><a name="l02759"></a><span class="lineno"> 2759</span>&#160;       {</div><div class="line"><a name="l02760"></a><span class="lineno"> 2760</span>&#160;         <span class="keywordflow">return</span> lt_metrici;</div><div class="line"><a name="l02761"></a><span class="lineno"> 2761</span>&#160;       }</div><div class="line"><a name="l02762"></a><span class="lineno"> 2762</span>&#160;       );</div><div class="line"><a name="l02763"></a><span class="lineno"> 2763</span>&#160;  </div><div class="line"><a name="l02764"></a><span class="lineno"> 2764</span>&#160;    T_CLUSTERIDX lcidx_Cs = </div><div class="line"><a name="l02765"></a><span class="lineno"> 2765</span>&#160;      <a class="code" href="namespacegaselect.html#ae9cfd02b23815a3c1291b4adb0b7658a">gaselect::getIdxRouletteWheel</a></div><div class="line"><a name="l02766"></a><span class="lineno"> 2766</span>&#160;      (lvectorrt_probDistRouletteWheel,</div><div class="line"><a name="l02767"></a><span class="lineno"> 2767</span>&#160;       T_CLUSTERIDX(0)</div><div class="line"><a name="l02768"></a><span class="lineno"> 2768</span>&#160;       );</div><div class="line"><a name="l02769"></a><span class="lineno"> 2769</span>&#160;    </div><div class="line"><a name="l02770"></a><span class="lineno"> 2770</span>&#160;    <span class="comment">/*END ALG_EAC_II_CLUSTERINGLABELVARK_ALVES_CAMPELLO_HRUSCHKA2006</span></div><div class="line"><a name="l02771"></a><span class="lineno"> 2771</span>&#160;<span class="comment">      ALG_FEAC_CLUSTERINGLABELVARK_ALVES_CAMPELLO_HRUSCHKA2006</span></div><div class="line"><a name="l02772"></a><span class="lineno"> 2772</span>&#160;<span class="comment">    */</span></div><div class="line"><a name="l02773"></a><span class="lineno"> 2773</span>&#160;<span class="preprocessor">#else</span></div><div class="line"><a name="l02774"></a><span class="lineno"> 2774</span>&#160;    <span class="comment">/* ELSE</span></div><div class="line"><a name="l02775"></a><span class="lineno"> 2775</span>&#160;<span class="comment">      ALG_EAC_CLUSTERINGLABELVARK_HRUSCHKA_CAMPELLO_CASTRO2006 || OTHER</span></div><div class="line"><a name="l02776"></a><span class="lineno"> 2776</span>&#160;<span class="comment">      \cite{Hruschka:Campello:Castro:GAClusteringLabelKVar:EAC:2006}</span></div><div class="line"><a name="l02777"></a><span class="lineno"> 2777</span>&#160;<span class="comment">      EAC</span></div><div class="line"><a name="l02778"></a><span class="lineno"> 2778</span>&#160;<span class="comment">    */</span></div><div class="line"><a name="l02779"></a><span class="lineno"> 2779</span>&#160;    </div><div class="line"><a name="l02780"></a><span class="lineno"> 2780</span>&#160;    std::uniform_int_distribution&lt;uintidx&gt; uniformdis_0K</div><div class="line"><a name="l02781"></a><span class="lineno"> 2781</span>&#160;      (0,(<a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>) aochromfeac_toMutate.getNumClusterK()-1);</div><div class="line"><a name="l02782"></a><span class="lineno"> 2782</span>&#160;</div><div class="line"><a name="l02783"></a><span class="lineno"> 2783</span>&#160;    T_CLUSTERIDX lcidx_Cs = uniformdis_0K(<a class="code" href="ga__clustering__operator_8hpp.html#acee5944d570f2fb7efdf1d4c801b30fb">gmt19937_eng</a>);</div><div class="line"><a name="l02784"></a><span class="lineno"> 2784</span>&#160;</div><div class="line"><a name="l02785"></a><span class="lineno"> 2785</span>&#160;</div><div class="line"><a name="l02786"></a><span class="lineno"> 2786</span>&#160;<span class="preprocessor">#endif  </span><span class="comment">/* END  #if defined(ALG_EAC_I_CLUSTERINGLABELVARK_ALVES_CAMPELLO_HRUSCHKA2006) || \</span></div><div class="line"><a name="l02787"></a><span class="lineno"> 2787</span>&#160;<span class="comment">           defined(ALG_EAC_III_CLUSTERINGLABELVARK_ALVES_CAMPELLO_HRUSCHKA2006)</span></div><div class="line"><a name="l02788"></a><span class="lineno"> 2788</span>&#160;<span class="comment">        */</span><span class="preprocessor"></span></div><div class="line"><a name="l02789"></a><span class="lineno"> 2789</span>&#160;</div><div class="line"><a name="l02790"></a><span class="lineno"> 2790</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l02791"></a><span class="lineno"> 2791</span>&#160;    ++geiinparam_verbose;</div><div class="line"><a name="l02792"></a><span class="lineno"> 2792</span>&#160;    <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l02793"></a><span class="lineno"> 2793</span>&#160;      std::cout &lt;&lt; <span class="stringliteral">&quot;MO2 2.1 RANDOMLY CHOOSE A CLUSTER C_s in g,  IN&quot;</span></div><div class="line"><a name="l02794"></a><span class="lineno"> 2794</span>&#160;                &lt;&lt; <span class="charliteral">&#39;(&#39;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="charliteral">&#39;)&#39;</span></div><div class="line"><a name="l02795"></a><span class="lineno"> 2795</span>&#160;                &lt;&lt; std::endl; </div><div class="line"><a name="l02796"></a><span class="lineno"> 2796</span>&#160;    }</div><div class="line"><a name="l02797"></a><span class="lineno"> 2797</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l02798"></a><span class="lineno"> 2798</span>&#160;</div><div class="line"><a name="l02799"></a><span class="lineno"> 2799</span>&#160;</div><div class="line"><a name="l02800"></a><span class="lineno"> 2800</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l02801"></a><span class="lineno"> 2801</span>&#160;    <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l02802"></a><span class="lineno"> 2802</span>&#160;      std::cout &lt;&lt; <span class="stringliteral">&quot;MO2 2.1 RANDOMLY CHOOSE A CLUSTER C_s in g, OUT&quot;</span></div><div class="line"><a name="l02803"></a><span class="lineno"> 2803</span>&#160;                &lt;&lt; <span class="charliteral">&#39;(&#39;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="charliteral">&#39;)&#39;</span></div><div class="line"><a name="l02804"></a><span class="lineno"> 2804</span>&#160;                &lt;&lt; <span class="stringliteral">&quot;\nCs = &quot;</span> &lt;&lt; lcidx_Cs </div><div class="line"><a name="l02805"></a><span class="lineno"> 2805</span>&#160;                &lt;&lt; std::endl; </div><div class="line"><a name="l02806"></a><span class="lineno"> 2806</span>&#160;    }</div><div class="line"><a name="l02807"></a><span class="lineno"> 2807</span>&#160;    --geiinparam_verbose;</div><div class="line"><a name="l02808"></a><span class="lineno"> 2808</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l02809"></a><span class="lineno"> 2809</span>&#160;</div><div class="line"><a name="l02810"></a><span class="lineno"> 2810</span>&#160;    <span class="comment">/*Cs must have more than two objects to be</span></div><div class="line"><a name="l02811"></a><span class="lineno"> 2811</span>&#160;<span class="comment">      eligible for this operator </span></div><div class="line"><a name="l02812"></a><span class="lineno"> 2812</span>&#160;<span class="comment">    */</span></div><div class="line"><a name="l02813"></a><span class="lineno"> 2813</span>&#160;    <span class="keywordflow">if</span>  ( lvectorit_genotypeNumInstClusterK.at(lcidx_Cs) &gt; 2 ) {</div><div class="line"><a name="l02814"></a><span class="lineno"> 2814</span>&#160;      </div><div class="line"><a name="l02815"></a><span class="lineno"> 2815</span>&#160;      T_CLUSTERIDX *larraycidx_memberShip =</div><div class="line"><a name="l02816"></a><span class="lineno"> 2816</span>&#160;        aochromfeac_toMutate.getString();</div><div class="line"><a name="l02817"></a><span class="lineno"> 2817</span>&#160;      </div><div class="line"><a name="l02818"></a><span class="lineno"> 2818</span>&#160;      <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a> luintidx_S1 = 0;</div><div class="line"><a name="l02819"></a><span class="lineno"> 2819</span>&#160;      </div><div class="line"><a name="l02820"></a><span class="lineno"> 2820</span>&#160;      {<span class="comment">/* BEGIN *2.2.1 Randomly choose an object s1 \in Cs;</span></div><div class="line"><a name="l02821"></a><span class="lineno"> 2821</span>&#160;<span class="comment">        */</span></div><div class="line"><a name="l02822"></a><span class="lineno"> 2822</span>&#160;        </div><div class="line"><a name="l02823"></a><span class="lineno"> 2823</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l02824"></a><span class="lineno"> 2824</span>&#160;        ++geiinparam_verbose;</div><div class="line"><a name="l02825"></a><span class="lineno"> 2825</span>&#160;        <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l02826"></a><span class="lineno"> 2826</span>&#160;          std::cout &lt;&lt; <span class="stringliteral">&quot;MO2 2.2.1 RANDOMLY CHOOSE A OBJECT s_1 in C_s,  IN&quot;</span></div><div class="line"><a name="l02827"></a><span class="lineno"> 2827</span>&#160;                    &lt;&lt; <span class="charliteral">&#39;(&#39;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="charliteral">&#39;)&#39;</span> </div><div class="line"><a name="l02828"></a><span class="lineno"> 2828</span>&#160;                    &lt;&lt; std::endl; </div><div class="line"><a name="l02829"></a><span class="lineno"> 2829</span>&#160;        }</div><div class="line"><a name="l02830"></a><span class="lineno"> 2830</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l02831"></a><span class="lineno"> 2831</span>&#160;        </div><div class="line"><a name="l02832"></a><span class="lineno"> 2832</span>&#160;        </div><div class="line"><a name="l02833"></a><span class="lineno"> 2833</span>&#160;        std::uniform_int_distribution&lt;uintidx&gt; uniformdis_consecutiveS1</div><div class="line"><a name="l02834"></a><span class="lineno"> 2834</span>&#160;          (0, <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>(lvectorit_genotypeNumInstClusterK.at(lcidx_Cs)-1));</div><div class="line"><a name="l02835"></a><span class="lineno"> 2835</span>&#160;        </div><div class="line"><a name="l02836"></a><span class="lineno"> 2836</span>&#160;        <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a> luintidx_ConsecutiveS1 =  <span class="comment">/*Index object S1*/</span></div><div class="line"><a name="l02837"></a><span class="lineno"> 2837</span>&#160;          uniformdis_consecutiveS1(<a class="code" href="ga__clustering__operator_8hpp.html#acee5944d570f2fb7efdf1d4c801b30fb">gmt19937_eng</a>);</div><div class="line"><a name="l02838"></a><span class="lineno"> 2838</span>&#160;          </div><div class="line"><a name="l02839"></a><span class="lineno"> 2839</span>&#160;        <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a> luintidx_l = 0;</div><div class="line"><a name="l02840"></a><span class="lineno"> 2840</span>&#160;        <span class="keywordflow">do</span> { </div><div class="line"><a name="l02841"></a><span class="lineno"> 2841</span>&#160;          <span class="keywordflow">if</span> ( larraycidx_memberShip[luintidx_l] == lcidx_Cs )</div><div class="line"><a name="l02842"></a><span class="lineno"> 2842</span>&#160;            ++luintidx_S1;</div><div class="line"><a name="l02843"></a><span class="lineno"> 2843</span>&#160;        } <span class="keywordflow">while</span> ( (luintidx_S1  &lt; luintidx_ConsecutiveS1) &amp;&amp;</div><div class="line"><a name="l02844"></a><span class="lineno"> 2844</span>&#160;                  (++luintidx_l &lt;  lui_numInstances ) <span class="comment">// aivectorptinst_instances.size())</span></div><div class="line"><a name="l02845"></a><span class="lineno"> 2845</span>&#160;                  );</div><div class="line"><a name="l02846"></a><span class="lineno"> 2846</span>&#160;        luintidx_S1 = luintidx_l;</div><div class="line"><a name="l02847"></a><span class="lineno"> 2847</span>&#160;        </div><div class="line"><a name="l02848"></a><span class="lineno"> 2848</span>&#160;        </div><div class="line"><a name="l02849"></a><span class="lineno"> 2849</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l02850"></a><span class="lineno"> 2850</span>&#160;        <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l02851"></a><span class="lineno"> 2851</span>&#160;          std::cout &lt;&lt; <span class="stringliteral">&quot;MO2 2.2.1 RANDOMLY CHOOSE A OBJECT s_1 in C_s, OUT&quot;</span></div><div class="line"><a name="l02852"></a><span class="lineno"> 2852</span>&#160;                    &lt;&lt; <span class="charliteral">&#39;(&#39;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="charliteral">&#39;)&#39;</span></div><div class="line"><a name="l02853"></a><span class="lineno"> 2853</span>&#160;                    &lt;&lt; <span class="stringliteral">&quot;\nluintidx_ConsecutiveS1 = &quot;</span> &lt;&lt; luintidx_ConsecutiveS1 </div><div class="line"><a name="l02854"></a><span class="lineno"> 2854</span>&#160;                    &lt;&lt; <span class="stringliteral">&quot;\ts_1 = &quot;</span> &lt;&lt; luintidx_S1;</div><div class="line"><a name="l02855"></a><span class="lineno"> 2855</span>&#160;          std::cout &lt;&lt; std::endl; </div><div class="line"><a name="l02856"></a><span class="lineno"> 2856</span>&#160;        }</div><div class="line"><a name="l02857"></a><span class="lineno"> 2857</span>&#160;        --geiinparam_verbose;</div><div class="line"><a name="l02858"></a><span class="lineno"> 2858</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l02859"></a><span class="lineno"> 2859</span>&#160;        </div><div class="line"><a name="l02860"></a><span class="lineno"> 2860</span>&#160;      } <span class="comment">/* END *2.2.1 Randomly choose an object s1 \in Cs;</span></div><div class="line"><a name="l02861"></a><span class="lineno"> 2861</span>&#160;<span class="comment">         */</span></div><div class="line"><a name="l02862"></a><span class="lineno"> 2862</span>&#160;          </div><div class="line"><a name="l02863"></a><span class="lineno"> 2863</span>&#160;      <span class="comment">/*2.2.2 Determine the farthest object s2 \in Cs from </span></div><div class="line"><a name="l02864"></a><span class="lineno"> 2864</span>&#160;<span class="comment">        s1;</span></div><div class="line"><a name="l02865"></a><span class="lineno"> 2865</span>&#160;<span class="comment">      */</span></div><div class="line"><a name="l02866"></a><span class="lineno"> 2866</span>&#160;      <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a> luintidx_S2 = </div><div class="line"><a name="l02867"></a><span class="lineno"> 2867</span>&#160;        <a class="code" href="namespacenearest.html#a23db35c89871abd7e5d41a36bc779064">nearest::farthestInstanceFromS1</a></div><div class="line"><a name="l02868"></a><span class="lineno"> 2868</span>&#160;        (luintidx_S1,      </div><div class="line"><a name="l02869"></a><span class="lineno"> 2869</span>&#160;         aochromfeac_toMutate.getString(),</div><div class="line"><a name="l02870"></a><span class="lineno"> 2870</span>&#160;         aiiterator_instfirst,</div><div class="line"><a name="l02871"></a><span class="lineno"> 2871</span>&#160;         aiiterator_instlast,</div><div class="line"><a name="l02872"></a><span class="lineno"> 2872</span>&#160;         aifunc2p_dist</div><div class="line"><a name="l02873"></a><span class="lineno"> 2873</span>&#160;         );</div><div class="line"><a name="l02874"></a><span class="lineno"> 2874</span>&#160;      </div><div class="line"><a name="l02875"></a><span class="lineno"> 2875</span>&#160;      <span class="comment">/*2.2.3 Generate two new clusters Cs’ and Cs’’,</span></div><div class="line"><a name="l02876"></a><span class="lineno"> 2876</span>&#160;<span class="comment">        placing the object(s) of Cs closer to s1 into</span></div><div class="line"><a name="l02877"></a><span class="lineno"> 2877</span>&#160;<span class="comment">        Cs’ and the object(s) closer to s2 into Cs’’;</span></div><div class="line"><a name="l02878"></a><span class="lineno"> 2878</span>&#160;<span class="comment">      */</span></div><div class="line"><a name="l02879"></a><span class="lineno"> 2879</span>&#160;      <a class="code" href="classmat_1_1_matrix_row.html">mat::MatrixRow&lt;T_FEATURE&gt;</a>  lmatrixrowt_centroidsNewS</div><div class="line"><a name="l02880"></a><span class="lineno"> 2880</span>&#160;        (2,<a class="code" href="classdata_1_1_instance.html">data::Instance&lt;T_FEATURE&gt;::getNumDimensions</a>());  <span class="comment">/*New centroids*/</span></div><div class="line"><a name="l02881"></a><span class="lineno"> 2881</span>&#160;</div><div class="line"><a name="l02882"></a><span class="lineno"> 2882</span>&#160;      <a class="code" href="classmat_1_1_matrix_row.html">mat::MatrixRow&lt;T_FEATURE_SUM&gt;</a>       </div><div class="line"><a name="l02883"></a><span class="lineno"> 2883</span>&#160;        llmatrixrowt_sumInstancesCluster</div><div class="line"><a name="l02884"></a><span class="lineno"> 2884</span>&#160;        (2,<a class="code" href="classdata_1_1_instance.html">data::Instance&lt;T_FEATURE&gt;::getNumDimensions</a>());</div><div class="line"><a name="l02885"></a><span class="lineno"> 2885</span>&#160;        </div><div class="line"><a name="l02886"></a><span class="lineno"> 2886</span>&#160;      </div><div class="line"><a name="l02887"></a><span class="lineno"> 2887</span>&#160;      lmatrixrowt_centroidsNewS.copyRow</div><div class="line"><a name="l02888"></a><span class="lineno"> 2888</span>&#160;        ((<a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>) 0,</div><div class="line"><a name="l02889"></a><span class="lineno"> 2889</span>&#160;         (*std::next(aiiterator_instfirst,luintidx_S1))-&gt;getFeatures()</div><div class="line"><a name="l02890"></a><span class="lineno"> 2890</span>&#160;         );</div><div class="line"><a name="l02891"></a><span class="lineno"> 2891</span>&#160;      lmatrixrowt_centroidsNewS.copyRow</div><div class="line"><a name="l02892"></a><span class="lineno"> 2892</span>&#160;        ((<a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>) 1,</div><div class="line"><a name="l02893"></a><span class="lineno"> 2893</span>&#160;         (*std::next(aiiterator_instfirst,luintidx_S2))-&gt;getFeatures()</div><div class="line"><a name="l02894"></a><span class="lineno"> 2894</span>&#160;         );</div><div class="line"><a name="l02895"></a><span class="lineno"> 2895</span>&#160;</div><div class="line"><a name="l02896"></a><span class="lineno"> 2896</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l02897"></a><span class="lineno"> 2897</span>&#160;      ++geiinparam_verbose;</div><div class="line"><a name="l02898"></a><span class="lineno"> 2898</span>&#160;      <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {      </div><div class="line"><a name="l02899"></a><span class="lineno"> 2899</span>&#160;        std::ostringstream lostrstream_labelSubStep;</div><div class="line"><a name="l02900"></a><span class="lineno"> 2900</span>&#160;        lostrstream_labelSubStep</div><div class="line"><a name="l02901"></a><span class="lineno"> 2901</span>&#160;          &lt;&lt; <span class="stringliteral">&quot;&lt;CENTROIDS:&quot;</span></div><div class="line"><a name="l02902"></a><span class="lineno"> 2902</span>&#160;          &lt;&lt;  geverbosepc_labelstep &lt;&lt; <span class="charliteral">&#39;:&#39;</span> &lt;&lt; lpc_labelFunc </div><div class="line"><a name="l02903"></a><span class="lineno"> 2903</span>&#160;          &lt;&lt; <span class="stringliteral">&quot;:S1_S2[&quot;</span> &lt;&lt; geverboseui_idproc &lt;&lt; <span class="charliteral">&#39;:&#39;</span> &lt;&lt; &amp;aochromfeac_toMutate &lt;&lt; <span class="stringliteral">&quot;]:&quot;</span>;</div><div class="line"><a name="l02904"></a><span class="lineno"> 2904</span>&#160;        lmatrixrowt_centroidsNewS.print</div><div class="line"><a name="l02905"></a><span class="lineno"> 2905</span>&#160;          (std::cout,</div><div class="line"><a name="l02906"></a><span class="lineno"> 2906</span>&#160;           lostrstream_labelSubStep.str().c_str(),</div><div class="line"><a name="l02907"></a><span class="lineno"> 2907</span>&#160;           <span class="charliteral">&#39;,&#39;</span>,</div><div class="line"><a name="l02908"></a><span class="lineno"> 2908</span>&#160;           <span class="charliteral">&#39;;&#39;</span></div><div class="line"><a name="l02909"></a><span class="lineno"> 2909</span>&#160;           );</div><div class="line"><a name="l02910"></a><span class="lineno"> 2910</span>&#160;        std::cout &lt;&lt; std::endl;</div><div class="line"><a name="l02911"></a><span class="lineno"> 2911</span>&#160;      }</div><div class="line"><a name="l02912"></a><span class="lineno"> 2912</span>&#160;      --geiinparam_verbose;</div><div class="line"><a name="l02913"></a><span class="lineno"> 2913</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l02914"></a><span class="lineno"> 2914</span>&#160;                                 </div><div class="line"><a name="l02915"></a><span class="lineno"> 2915</span>&#160; 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        aifunc2p_dist</div><div class="line"><a name="l02941"></a><span class="lineno"> 2941</span>&#160;         );</div><div class="line"><a name="l02942"></a><span class="lineno"> 2942</span>&#160;</div><div class="line"><a name="l02943"></a><span class="lineno"> 2943</span>&#160;      lmatrixwrownull_genotypeCentroids.<a class="code" href="classmat_1_1_matrix_with_row_null.html#a89418b9f4a83a1150e580a2d64b061ff">copyRow</a></div><div class="line"><a name="l02944"></a><span class="lineno"> 2944</span>&#160;        (lcidx_Cs,lmatrixrowt_centroidsNewS.getRow(0));</div><div class="line"><a name="l02945"></a><span class="lineno"> 2945</span>&#160;      lmatrixwrownull_genotypeCentroids.<a class="code" href="classmat_1_1_matrix_with_row_null.html#a27c9e29ca36eddc32682677f676ade26">addRow</a></div><div class="line"><a name="l02946"></a><span class="lineno"> 2946</span>&#160;        (lmatrixrowt_centroidsNewS.getRow(1));</div><div class="line"><a name="l02947"></a><span class="lineno"> 2947</span>&#160;</div><div class="line"><a name="l02948"></a><span class="lineno"> 2948</span>&#160;</div><div class="line"><a name="l02949"></a><span class="lineno"> 2949</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l02950"></a><span class="lineno"> 2950</span>&#160; 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       (aiiterator_instfirst,</div><div class="line"><a name="l02982"></a><span class="lineno"> 2982</span>&#160;         aiiterator_instlast,</div><div class="line"><a name="l02983"></a><span class="lineno"> 2983</span>&#160;         lpartition_clusters,</div><div class="line"><a name="l02984"></a><span class="lineno"> 2984</span>&#160;         [](<span class="keyword">const</span> <a class="code" href="classdata_1_1_instance.html">data::Instance&lt;T_FEATURE&gt;</a>* aiinst_iter )</div><div class="line"><a name="l02985"></a><span class="lineno"> 2985</span>&#160;         -&gt; T_INSTANCES_CLUSTER_K</div><div class="line"><a name="l02986"></a><span class="lineno"> 2986</span>&#160;         {</div><div class="line"><a name="l02987"></a><span class="lineno"> 2987</span>&#160;           <span class="keywordflow">return</span>  T_INSTANCES_CLUSTER_K(1);</div><div class="line"><a name="l02988"></a><span class="lineno"> 2988</span>&#160;         },</div><div class="line"><a name="l02989"></a><span class="lineno"> 2989</span>&#160;         [](<span class="keyword">const</span> <a class="code" href="classdata_1_1_instance.html">data::Instance&lt;T_FEATURE&gt;</a>* aiinst_iter )</div><div class="line"><a name="l02990"></a><span class="lineno"> 2990</span>&#160;         -&gt; T_CLUSTERIDX</div><div class="line"><a name="l02991"></a><span class="lineno"> 2991</span>&#160;         {</div><div class="line"><a name="l02992"></a><span class="lineno"> 2992</span>&#160;           <a class="code" href="classdata_1_1_instance_class.html">data::InstanceClass</a></div><div class="line"><a name="l02993"></a><span class="lineno"> 2993</span>&#160;             &lt;T_FEATURE,</div><div class="line"><a name="l02994"></a><span class="lineno"> 2994</span>&#160;              T_INSTANCES_CLUSTER_K,</div><div class="line"><a name="l02995"></a><span class="lineno"> 2995</span>&#160;              T_CLUSTERIDX&gt;</div><div class="line"><a name="l02996"></a><span class="lineno"> 2996</span>&#160;             *linstclass_iter = </div><div class="line"><a name="l02997"></a><span class="lineno"> 2997</span>&#160;             (<a class="code" href="classdata_1_1_instance_class.html">data::InstanceClass</a></div><div class="line"><a name="l02998"></a><span class="lineno"> 2998</span>&#160;              &lt;T_FEATURE,</div><div class="line"><a name="l02999"></a><span class="lineno"> 2999</span>&#160;              T_INSTANCES_CLUSTER_K,</div><div class="line"><a name="l03000"></a><span class="lineno"> 3000</span>&#160;              T_CLUSTERIDX&gt;*)</div><div class="line"><a name="l03001"></a><span class="lineno"> 3001</span>&#160;             aiinst_iter;</div><div class="line"><a name="l03002"></a><span class="lineno"> 3002</span>&#160;               </div><div class="line"><a name="l03003"></a><span class="lineno"> 3003</span>&#160;           <span class="keywordflow">return</span> linstclass_iter-&gt;getClassIdx();</div><div class="line"><a name="l03004"></a><span class="lineno"> 3004</span>&#160;               </div><div class="line"><a name="l03005"></a><span class="lineno"> 3005</span>&#160;         }</div><div class="line"><a name="l03006"></a><span class="lineno"> 3006</span>&#160;         );</div><div class="line"><a name="l03007"></a><span class="lineno"> 3007</span>&#160;</div><div class="line"><a name="l03008"></a><span class="lineno"> 3008</span>&#160;      std::vector&lt;T_REAL&gt;&amp;&amp;  lvectort_partialFitness =</div><div class="line"><a name="l03009"></a><span class="lineno"> 3009</span>&#160;        sm::partialRandIndex&lt;T_REAL,T_INSTANCES_CLUSTER_K&gt;(lmatchmatrix_confusion);</div><div class="line"><a name="l03010"></a><span class="lineno"> 3010</span>&#160;</div><div class="line"><a name="l03011"></a><span class="lineno"> 3011</span>&#160;<span class="comment">/*#endif __FITNESS_RAND_INDEX__*/</span>      </div><div class="line"><a name="l03012"></a><span class="lineno"> 3012</span>&#160;</div><div class="line"><a name="l03013"></a><span class="lineno"> 3013</span>&#160;<span class="preprocessor">#else </span><span class="comment">/* __FITNESS_SIMPLIFIED_SILHOUETTE__ */</span><span class="preprocessor"></span></div><div class="line"><a name="l03014"></a><span class="lineno"> 3014</span>&#160;      </div><div class="line"><a name="l03015"></a><span class="lineno"> 3015</span>&#160;      <a class="code" href="classpartition_1_1_partition_label.html">partition::PartitionLabel&lt;T_CLUSTERIDX&gt;</a></div><div class="line"><a name="l03016"></a><span class="lineno"> 3016</span>&#160;        lpartition_clustersLabel</div><div class="line"><a name="l03017"></a><span class="lineno"> 3017</span>&#160;        (aochromfeac_toMutate.getString(),</div><div class="line"><a name="l03018"></a><span class="lineno"> 3018</span>&#160;         aochromfeac_toMutate.getStringSize(),</div><div class="line"><a name="l03019"></a><span class="lineno"> 3019</span>&#160;         aochromfeac_toMutate.getNumClusterK()</div><div class="line"><a name="l03020"></a><span class="lineno"> 3020</span>&#160;         );</div><div class="line"><a name="l03021"></a><span class="lineno"> 3021</span>&#160;</div><div class="line"><a name="l03022"></a><span class="lineno"> 3022</span>&#160;      std::vector&lt;T_REAL&gt;&amp;&amp; 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        );</div><div class="line"><a name="l03031"></a><span class="lineno"> 3031</span>&#160;</div><div class="line"><a name="l03032"></a><span class="lineno"> 3032</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__FITNESS_SIMPLIFIED_SILHOUETTE__*/</span><span class="preprocessor"></span></div><div class="line"><a name="l03033"></a><span class="lineno"> 3033</span>&#160;           </div><div class="line"><a name="l03034"></a><span class="lineno"> 3034</span>&#160;      T_REAL lmetrict_partialSilhouette = </div><div class="line"><a name="l03035"></a><span class="lineno"> 3035</span>&#160;        <a class="code" href="namespaceinterfacesse.html#a25f6950d589b92fd5bcf2007fb3fae19">interfacesse::sum</a></div><div class="line"><a name="l03036"></a><span class="lineno"> 3036</span>&#160;        (lvectort_partialFitness.data(),</div><div class="line"><a name="l03037"></a><span class="lineno"> 3037</span>&#160;         (<a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>) lvectort_partialFitness.size()</div><div class="line"><a name="l03038"></a><span class="lineno"> 3038</span>&#160;         );</div><div class="line"><a name="l03039"></a><span class="lineno"> 3039</span>&#160;</div><div class="line"><a name="l03040"></a><span class="lineno"> 3040</span>&#160;      lmetrict_partialSilhouette /= (T_REAL) lvectort_partialFitness.size();</div><div class="line"><a name="l03041"></a><span class="lineno"> 3041</span>&#160;</div><div class="line"><a name="l03042"></a><span class="lineno"> 3042</span>&#160;      aochromfeac_toMutate.setPartialFcC(lvectort_partialFitness);</div><div class="line"><a name="l03043"></a><span class="lineno"> 3043</span>&#160;      aochromfeac_toMutate.setObjetiveFunc(lmetrict_partialSilhouette);</div><div class="line"><a name="l03044"></a><span class="lineno"> 3044</span>&#160;      </div><div class="line"><a name="l03045"></a><span class="lineno"> 3045</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l03046"></a><span class="lineno"> 3046</span>&#160;      <span class="keyword">const</span> <span class="keywordtype">char</span>* lpc_labelFuncStep = <span class="stringliteral">&quot;2. FOR END&quot;</span>;</div><div class="line"><a name="l03047"></a><span class="lineno"> 3047</span>&#160;      ++geiinparam_verbose;</div><div class="line"><a name="l03048"></a><span class="lineno"> 3048</span>&#160;      <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {      </div><div class="line"><a name="l03049"></a><span class="lineno"> 3049</span>&#160;        std::ostringstream lostrstream_labelFunStep;</div><div class="line"><a name="l03050"></a><span class="lineno"> 3050</span>&#160;        lostrstream_labelFunStep &lt;&lt;  geverbosepc_labelstep</div><div class="line"><a name="l03051"></a><span class="lineno"> 3051</span>&#160;                                 &lt;&lt; <span class="charliteral">&#39;:&#39;</span> &lt;&lt; lpc_labelFunc</div><div class="line"><a name="l03052"></a><span class="lineno"> 3052</span>&#160;                                 &lt;&lt; <span class="charliteral">&#39;:&#39;</span> &lt;&lt;  lpc_labelFuncStep; </div><div class="line"><a name="l03053"></a><span class="lineno"> 3053</span>&#160;        aochromfeac_toMutate.<a class="code" href="classpartition_1_1_partition_label.html#a260d6aa7a44d081cd05d8566f90c9405">print</a></div><div class="line"><a name="l03054"></a><span class="lineno"> 3054</span>&#160;          (std::cout,</div><div class="line"><a name="l03055"></a><span class="lineno"> 3055</span>&#160;           lostrstream_labelFunStep.str().c_str(),</div><div class="line"><a name="l03056"></a><span class="lineno"> 3056</span>&#160;           <span class="charliteral">&#39;,&#39;</span>,</div><div class="line"><a name="l03057"></a><span class="lineno"> 3057</span>&#160;           <span class="charliteral">&#39;;&#39;</span></div><div class="line"><a name="l03058"></a><span class="lineno"> 3058</span>&#160;           );</div><div class="line"><a name="l03059"></a><span class="lineno"> 3059</span>&#160;      }</div><div class="line"><a name="l03060"></a><span class="lineno"> 3060</span>&#160;      --geiinparam_verbose;</div><div class="line"><a name="l03061"></a><span class="lineno"> 3061</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"> </span></div><div class="line"><a name="l03062"></a><span class="lineno"> 3062</span>&#160;      </div><div class="line"><a name="l03063"></a><span class="lineno"> 3063</span>&#160;</div><div class="line"><a name="l03064"></a><span class="lineno"> 3064</span>&#160;    } <span class="comment">/*Else do not split Cs.*/</span></div><div class="line"><a name="l03065"></a><span class="lineno"> 3065</span>&#160;</div><div class="line"><a name="l03066"></a><span class="lineno"> 3066</span>&#160; </div><div class="line"><a name="l03067"></a><span class="lineno"> 3067</span>&#160;  } <span class="comment">/*End For*/</span></div><div class="line"><a name="l03068"></a><span class="lineno"> 3068</span>&#160;  </div><div class="line"><a name="l03069"></a><span class="lineno"> 3069</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l03070"></a><span class="lineno"> 3070</span>&#160;  <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l03071"></a><span class="lineno"> 3071</span>&#160;    std::cout &lt;&lt; lpc_labelFunc</div><div class="line"><a name="l03072"></a><span class="lineno"> 3072</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;: OUT(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="charliteral">&#39;)&#39;</span></div><div class="line"><a name="l03073"></a><span class="lineno"> 3073</span>&#160;              &lt;&lt; <span class="stringliteral">&quot; K = &quot;</span> &lt;&lt; aochromfeac_toMutate.getNumClusterK() &lt;&lt; <span class="charliteral">&#39;\n&#39;</span>; </div><div class="line"><a name="l03074"></a><span class="lineno"> 3074</span>&#160;    std::ostringstream lostrstream_labelFunc;</div><div class="line"><a name="l03075"></a><span class="lineno"> 3075</span>&#160;    lostrstream_labelFunc</div><div class="line"><a name="l03076"></a><span class="lineno"> 3076</span>&#160;      &lt;&lt;  geverbosepc_labelstep</div><div class="line"><a name="l03077"></a><span class="lineno"> 3077</span>&#160;      &lt;&lt; <span class="charliteral">&#39;:&#39;</span> &lt;&lt; lpc_labelFunc;</div><div class="line"><a name="l03078"></a><span class="lineno"> 3078</span>&#160;    aochromfeac_toMutate.print(std::cout,lostrstream_labelFunc.str().c_str(),<span class="charliteral">&#39;,&#39;</span>,<span class="charliteral">&#39;;&#39;</span>);</div><div class="line"><a name="l03079"></a><span class="lineno"> 3079</span>&#160;  }</div><div class="line"><a name="l03080"></a><span class="lineno"> 3080</span>&#160;  --geiinparam_verbose;</div><div class="line"><a name="l03081"></a><span class="lineno"> 3081</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l03082"></a><span class="lineno"> 3082</span>&#160;</div><div class="line"><a name="l03083"></a><span class="lineno"> 3083</span>&#160;}</div><div class="line"><a name="l03084"></a><span class="lineno"> 3084</span>&#160;</div><div class="line"><a name="l03085"></a><span class="lineno"> 3085</span>&#160;} <span class="comment">/*END namespace gaclusteringop*/</span></div><div class="line"><a name="l03086"></a><span class="lineno"> 3086</span>&#160;</div><div class="line"><a name="l03087"></a><span class="lineno"> 3087</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__GA_CLUSTERING_OPERATOR_HPP*/</span><span class="preprocessor"></span></div><div class="line"><a name="l03088"></a><span class="lineno"> 3088</span>&#160;</div><div class="line"><a name="l03089"></a><span class="lineno"> 3089</span>&#160;  </div><div class="ttc" id="classpartition_1_1_partition_label_html"><div class="ttname"><a href="classpartition_1_1_partition_label.html">partition::PartitionLabel</a></div><div class="ttdoc">Partition of instances with label string assigned previous.</div><div class="ttdef"><b>Definition:</b> <a href="partition__label_8hpp_source.html#l00036">partition_label.hpp:36</a></div></div>
<div class="ttc" id="bit__array_8hpp_html"><div class="ttname"><a href="bit__array_8hpp.html">bit_array.hpp</a></div><div class="ttdoc">bit array</div></div>
<div class="ttc" id="classgaencode_1_1_chrom_fixed_length_html_aac60dd08cf0d29f08845a6381d84edad"><div class="ttname"><a href="classgaencode_1_1_chrom_fixed_length.html#aac60dd08cf0d29f08845a6381d84edad">gaencode::ChromFixedLength&lt; T_CLUSTERIDX, T_METRIC &gt;::getStringSize</a></div><div class="ttdeci">virtual const uintidx getStringSize() const</div><div class="ttdef"><b>Definition:</b> <a href="chromosome__fixedlength_8hpp_source.html#l00187">chromosome_fixedlength.hpp:187</a></div></div>
<div class="ttc" id="classgaencode_1_1_chromosome_base_html_afc3f7dbd72d88157ba37eb8bea29478e"><div class="ttname"><a href="classgaencode_1_1_chromosome_base.html#afc3f7dbd72d88157ba37eb8bea29478e">gaencode::ChromosomeBase::getObjetiveFunc</a></div><div class="ttdeci">const T_METRIC getObjetiveFunc() const</div><div class="ttdef"><b>Definition:</b> <a href="chromosome__base_8hpp_source.html#l00113">chromosome_base.hpp:113</a></div></div>
<div class="ttc" id="namespacegaclusteringop_html"><div class="ttname"><a href="namespacegaclusteringop.html">gaclusteringop</a></div><div class="ttdoc">Genetic cluster-oriented operators.</div></div>
<div class="ttc" id="classgaencode_1_1_chromosome_base_html_ab136d6f70ea068097d764e5bc34015e1"><div class="ttname"><a href="classgaencode_1_1_chromosome_base.html#ab136d6f70ea068097d764e5bc34015e1">gaencode::ChromosomeBase::setFitness</a></div><div class="ttdeci">void setFitness(T_METRIC ait_fitness)</div><div class="ttdef"><b>Definition:</b> <a href="chromosome__base_8hpp_source.html#l00124">chromosome_base.hpp:124</a></div></div>
<div class="ttc" id="classmat_1_1_matrix_row_html_a1070fba1c0ec0fbaa309f141817be412"><div class="ttname"><a href="classmat_1_1_matrix_row.html#a1070fba1c0ec0fbaa309f141817be412">mat::MatrixRow::initialize</a></div><div class="ttdeci">void initialize(const T_FEATURE ait_value=T_FEATURE(0))</div><div class="ttdef"><b>Definition:</b> <a href="matrix_8hpp_source.html#l00129">matrix.hpp:129</a></div></div>
<div class="ttc" id="classmat_1_1_matrix_base_html_ac500eedd5e203327d3292f8ab22d8f3e"><div class="ttname"><a href="classmat_1_1_matrix_base.html#ac500eedd5e203327d3292f8ab22d8f3e">mat::MatrixBase::getNumRows</a></div><div class="ttdeci">const uintidx getNumRows() const</div><div class="ttdef"><b>Definition:</b> <a href="matrix__base_8hpp_source.html#l00076">matrix_base.hpp:76</a></div></div>
<div class="ttc" id="classgaencode_1_1_chromosome_g_g_a_html"><div class="ttname"><a href="classgaencode_1_1_chromosome_g_g_a.html">gaencode::ChromosomeGGA</a></div><div class="ttdoc">Chromosome encoding two parts.</div><div class="ttdef"><b>Definition:</b> <a href="chromosome__gga_8hpp_source.html#l00041">chromosome_gga.hpp:41</a></div></div>
<div class="ttc" id="classds_1_1_iterator_partition_linked_html"><div class="ttname"><a href="classds_1_1_iterator_partition_linked.html">ds::IteratorPartitionLinked</a></div><div class="ttdoc">An iterator for a PartitionLinked.</div><div class="ttdef"><b>Definition:</b> <a href="partition__linked_8hpp_source.html#l00035">partition_linked.hpp:35</a></div></div>
<div class="ttc" id="namespacegaclusteringop_html_a53fa1eea7173c38da2ce171f83b0d464"><div class="ttname"><a href="namespacegaclusteringop.html#a53fa1eea7173c38da2ce171f83b0d464">gaclusteringop::mergeMutation</a></div><div class="ttdeci">void mergeMutation(gaencode::ChromosomeGGA&lt; T_CLUSTERIDX, T_REAL &gt; &amp;aiochromab_toMutate)</div><div class="ttdef"><b>Definition:</b> <a href="ga__clustering__operator_8hpp_source.html#l01019">ga_clustering_operator.hpp:1019</a></div></div>
<div class="ttc" id="namespacegaselect_html_ae9cfd02b23815a3c1291b4adb0b7658a"><div class="ttname"><a href="namespacegaselect.html#ae9cfd02b23815a3c1291b4adb0b7658a">gaselect::getIdxRouletteWheel</a></div><div class="ttdeci">T_INTIDX getIdxRouletteWheel(const std::vector&lt; T_PROBABILITY &gt; &amp;aivectorrt_probDist, const T_INTIDX aiuintidx_begin)</div><div class="ttdoc">Selection a random index in [IdxBegin,n].</div><div class="ttdef"><b>Definition:</b> <a href="ga__selection_8hpp_source.html#l00063">ga_selection.hpp:63</a></div></div>
<div class="ttc" id="common_8hpp_html_a3f6c33fb604556cdc425e7aa2289d009"><div class="ttname"><a href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a></div><div class="ttdeci">uint32_t uintidx</div><div class="ttdef"><b>Definition:</b> <a href="common_8hpp_source.html#l00020">common.hpp:20</a></div></div>
<div class="ttc" id="classmat_1_1_matrix_with_row_null_html_a8d77f1703911ef50ec18d351e7bf17da"><div class="ttname"><a href="classmat_1_1_matrix_with_row_null.html#a8d77f1703911ef50ec18d351e7bf17da">mat::MatrixWithRowNull&lt; T_GENE &gt;::getNumRowsMax</a></div><div class="ttdeci">const uintidx getNumRowsMax() const</div><div class="ttdef"><b>Definition:</b> <a href="matrix__withrownull_8hpp_source.html#l00187">matrix_withrownull.hpp:187</a></div></div>
<div class="ttc" id="namespacenearest_html_ae11d0bb55d785136c13f44f2505fbe54"><div class="ttname"><a href="namespacenearest.html#ae11d0bb55d785136c13f44f2505fbe54">nearest::findTwoNearestCentroids</a></div><div class="ttdeci">T_CLUSTERIDX findTwoNearestCentroids(T_CLUSTERIDX aicidx_centroidCj, const mat::MatrixBase&lt; T_FEATURE &gt; &amp;aimatrixt_centroids, dist::Dist&lt; T_DIST, T_FEATURE &gt; &amp;aifunc2p_dist)</div><div class="ttdoc">Find the centroid Cjp closest to the centroid Cj.</div><div class="ttdef"><b>Definition:</b> <a href="nearestcentroids__operator_8hpp_source.html#l00046">nearestcentroids_operator.hpp:46</a></div></div>
<div class="ttc" id="classdata_1_1_instance_html_a02d828c30db46d999f1830ea7b4d9c74"><div class="ttname"><a href="classdata_1_1_instance.html#a02d828c30db46d999f1830ea7b4d9c74">data::Instance::getInfiniteFeature</a></div><div class="ttdeci">static T_FEATURE getInfiniteFeature()</div><div class="ttdef"><b>Definition:</b> <a href="instance_8hpp_source.html#l00167">instance.hpp:167</a></div></div>
<div class="ttc" id="namespacegaintegerop_html_ab3fdfa039ef172762476ee93b9b5e4f0"><div class="ttname"><a href="namespacegaintegerop.html#ab3fdfa039ef172762476ee93b9b5e4f0">gaintegerop::oneChangelabel</a></div><div class="ttdeci">void oneChangelabel(gaencode::ChromosomeString&lt; T_INTEGER, T_METRIC &gt; &amp;aochrom_relabel, T_INTEGER aigene_Cs, T_INTEGER aigene_Cj)</div><div class="ttdoc">One change label.</div><div class="ttdef"><b>Definition:</b> <a href="ga__integer__operator_8hpp_source.html#l00130">ga_integer_operator.hpp:130</a></div></div>
<div class="ttc" id="partition__label_8hpp_html"><div class="ttname"><a href="partition__label_8hpp.html">partition_label.hpp</a></div><div class="ttdoc">Partition based on the label of the instances.</div></div>
<div class="ttc" id="classmat_1_1_matrix_with_row_null_html_a27c9e29ca36eddc32682677f676ade26"><div class="ttname"><a href="classmat_1_1_matrix_with_row_null.html#a27c9e29ca36eddc32682677f676ade26">mat::MatrixWithRowNull::addRow</a></div><div class="ttdeci">void addRow(const T *aiT_row)</div><div class="ttdef"><b>Definition:</b> <a href="matrix__withrownull_8hpp_source.html#l00310">matrix_withrownull.hpp:310</a></div></div>
<div class="ttc" id="classgaencode_1_1_chromosome_c_b_g_a_html"><div class="ttname"><a href="classgaencode_1_1_chromosome_c_b_g_a.html">gaencode::ChromosomeCBGA</a></div><div class="ttdoc">A set of centroids stands for a codebook of the application and the partitions .</div><div class="ttdef"><b>Definition:</b> <a href="chromosome__cbga_8hpp_source.html#l00050">chromosome_cbga.hpp:50</a></div></div>
<div class="ttc" id="classgaencode_1_1_chromosome_base_html_a0c0f339b486fb7d097d2afac2539ddc8"><div class="ttname"><a href="classgaencode_1_1_chromosome_base.html#a0c0f339b486fb7d097d2afac2539ddc8">gaencode::ChromosomeBase::setObjetiveFunc</a></div><div class="ttdeci">void setObjetiveFunc(T_METRIC ait_objetiveFunc)</div><div class="ttdef"><b>Definition:</b> <a href="chromosome__base_8hpp_source.html#l00108">chromosome_base.hpp:108</a></div></div>
<div class="ttc" id="namespacegaclusteringop_html_a935f199f5ca932fbaa301198fcc563f9"><div class="ttname"><a href="namespacegaclusteringop.html#a935f199f5ca932fbaa301198fcc563f9">gaclusteringop::splittingMutation</a></div><div class="ttdeci">void splittingMutation(gaencode::ChromosomeGGA&lt; T_CLUSTERIDX, T_REAL &gt; &amp;aiochromab_toMutate)</div><div class="ttdoc">Mutation by cluster splitting .</div><div class="ttdef"><b>Definition:</b> <a href="ga__clustering__operator_8hpp_source.html#l00938">ga_clustering_operator.hpp:938</a></div></div>
<div class="ttc" id="classgaencode_1_1_chrom_fixed_length_html_ab9d0b01b82cd679c6232dcd78c13e9d2"><div class="ttname"><a href="classgaencode_1_1_chrom_fixed_length.html#ab9d0b01b82cd679c6232dcd78c13e9d2">gaencode::ChromFixedLength::getGene</a></div><div class="ttdeci">virtual const T_GENE getGene(const uintidx aiuintidx_idxGene) const</div><div class="ttdef"><b>Definition:</b> <a href="chromosome__fixedlength_8hpp_source.html#l00221">chromosome_fixedlength.hpp:221</a></div></div>
<div class="ttc" id="classds_1_1_iterator_partition_linked_html_ad171cb96653fadaec272389381a4f8b4"><div class="ttname"><a href="classds_1_1_iterator_partition_linked.html#ad171cb96653fadaec272389381a4f8b4">ds::IteratorPartitionLinked::begin</a></div><div class="ttdeci">void begin(T_CLUSTERIDX aicidx_clusterK)</div><div class="ttdef"><b>Definition:</b> <a href="partition__linked_8hpp_source.html#l00372">partition_linked.hpp:372</a></div></div>
<div class="ttc" id="classmat_1_1_matrix_with_row_null_html"><div class="ttname"><a href="classmat_1_1_matrix_with_row_null.html">mat::MatrixWithRowNull&lt; T_FEATURE &gt;</a></div></div>
<div class="ttc" id="classmat_1_1_matrix_with_row_null_html_a89418b9f4a83a1150e580a2d64b061ff"><div class="ttname"><a href="classmat_1_1_matrix_with_row_null.html#a89418b9f4a83a1150e580a2d64b061ff">mat::MatrixWithRowNull::copyRow</a></div><div class="ttdeci">void copyRow(const uintidx aiui_idxRow, const T *aiT_row)</div><div class="ttdef"><b>Definition:</b> <a href="matrix__withrownull_8hpp_source.html#l00181">matrix_withrownull.hpp:181</a></div></div>
<div class="ttc" id="classgaencode_1_1_chrom_fixed_length_html_a4d1d15f6be16c0d0a23824033993aa71"><div class="ttname"><a href="classgaencode_1_1_chrom_fixed_length.html#a4d1d15f6be16c0d0a23824033993aa71">gaencode::ChromFixedLength&lt; T_CLUSTERIDX, T_METRIC &gt;::getString</a></div><div class="ttdeci">virtual T_CLUSTERIDX * getString()</div><div class="ttdef"><b>Definition:</b> <a href="chromosome__fixedlength_8hpp_source.html#l00201">chromosome_fixedlength.hpp:201</a></div></div>
<div class="ttc" id="classgaencode_1_1_chromosome_base_html_ab7a374a062ba8b5c6b4e674bae9a8299"><div class="ttname"><a href="classgaencode_1_1_chromosome_base.html#ab7a374a062ba8b5c6b4e674bae9a8299">gaencode::ChromosomeBase::print</a></div><div class="ttdeci">virtual void print(std::ostream &amp;os=std::cout, const char *aipc_label=&quot;&quot;, const char aic_delimCoef=',', const char aic_delimRow=';') const</div><div class="ttdef"><b>Definition:</b> <a href="chromosome__base_8hpp_source.html#l00131">chromosome_base.hpp:131</a></div></div>
<div class="ttc" id="classds_1_1_partition_linked_html"><div class="ttname"><a href="classds_1_1_partition_linked.html">ds::PartitionLinked</a></div><div class="ttdoc">Data structure to define the instances that belong to a cluster consecutively.</div><div class="ttdef"><b>Definition:</b> <a href="partition__linked_8hpp_source.html#l00042">partition_linked.hpp:42</a></div></div>
<div class="ttc" id="classmat_1_1_bit_array_html"><div class="ttname"><a href="classmat_1_1_bit_array.html">mat::BitArray</a></div><div class="ttdoc">Bit array.</div><div class="ttdef"><b>Definition:</b> <a href="bit__array_8hpp_source.html#l00043">bit_array.hpp:43</a></div></div>
<div class="ttc" id="classds_1_1_partition_linked_stats_html"><div class="ttname"><a href="classds_1_1_partition_linked_stats.html">ds::PartitionLinkedStats</a></div><div class="ttdoc">Partition with an array of membership.</div><div class="ttdef"><b>Definition:</b> <a href="partition__linked__stats_8hpp_source.html#l00044">partition_linked_stats.hpp:44</a></div></div>
<div class="ttc" id="classgaencode_1_1_chrom_fixed_length_html_af29275f1369d5ba7ca30da4831a528db"><div class="ttname"><a href="classgaencode_1_1_chrom_fixed_length.html#af29275f1369d5ba7ca30da4831a528db">gaencode::ChromFixedLength::begin</a></div><div class="ttdeci">T_GENE * begin()</div><div class="ttdef"><b>Definition:</b> <a href="chromosome__fixedlength_8hpp_source.html#l00211">chromosome_fixedlength.hpp:211</a></div></div>
<div class="ttc" id="classgaencode_1_1_chrom_fixed_length_html_a406e67fa48d6cdfc7a01f0c6e04f373b"><div class="ttname"><a href="classgaencode_1_1_chrom_fixed_length.html#a406e67fa48d6cdfc7a01f0c6e04f373b">gaencode::ChromFixedLength::stcgetStringSize</a></div><div class="ttdeci">static const uintidx stcgetStringSize()</div><div class="ttdef"><b>Definition:</b> <a href="chromosome__fixedlength_8hpp_source.html#l00182">chromosome_fixedlength.hpp:182</a></div></div>
<div class="ttc" id="classgaencode_1_1_chrom_fixed_length_html_a62cd9d117ffefb43b4de56cf82bc44bc"><div class="ttname"><a href="classgaencode_1_1_chrom_fixed_length.html#a62cd9d117ffefb43b4de56cf82bc44bc">gaencode::ChromFixedLength::setGene</a></div><div class="ttdeci">virtual void setGene(uintidx aiuintidx_idxGene, T_GENE ait_newGene)</div><div class="ttdef"><b>Definition:</b> <a href="chromosome__fixedlength_8hpp_source.html#l00227">chromosome_fixedlength.hpp:227</a></div></div>
<div class="ttc" id="classmat_1_1_matrix_row_html"><div class="ttname"><a href="classmat_1_1_matrix_row.html">mat::MatrixRow</a></div><div class="ttdoc">Matrix store items for row.</div><div class="ttdef"><b>Definition:</b> <a href="matrix_8hpp_source.html#l00046">matrix.hpp:46</a></div></div>
<div class="ttc" id="vector__utils_8hpp_html"><div class="ttname"><a href="vector__utils_8hpp.html">vector_utils.hpp</a></div><div class="ttdoc">Operations for vector manipulation.</div></div>
<div class="ttc" id="namespaceprob_html_a736bde3100258c3c2d13ebfe2b6746f8"><div class="ttname"><a href="namespaceprob.html#a736bde3100258c3c2d13ebfe2b6746f8">prob::getRandPairUnlikeInOrd</a></div><div class="ttdeci">auto getRandPairUnlikeInOrd(FUNCTION function_generate) -&gt; std::pair&lt; decltype(function_generate()), decltype(function_generate())&gt;</div><div class="ttdoc">Get two random number diferent in order.</div><div class="ttdef"><b>Definition:</b> <a href="probability__selection_8hpp_source.html#l00190">probability_selection.hpp:190</a></div></div>
<div class="ttc" id="classmat_1_1_matrix_resizable_row_html_a7dfaaa9e49857a46c3b3977dd741f5f9"><div class="ttname"><a href="classmat_1_1_matrix_resizable_row.html#a7dfaaa9e49857a46c3b3977dd741f5f9">mat::MatrixResizableRow::merge</a></div><div class="ttdeci">void merge(const MatrixResizableRow&lt; T_FEATURE, T_WEIGHT &gt; &amp;aimatrixresizerow_B, const MatrixResizableRow&lt; T_FEATURE, T_WEIGHT &gt; &amp;aimatrixresizerow_C)</div><div class="ttdef"><b>Definition:</b> <a href="matrix__resizablerow_8hpp_source.html#l00190">matrix_resizablerow.hpp:190</a></div></div>
<div class="ttc" id="namespacevectorutils_html_ae3fd429283cdfa733ff31c56e5c2d629"><div class="ttname"><a href="namespacevectorutils.html#ae3fd429283cdfa733ff31c56e5c2d629">vectorutils::keepItems</a></div><div class="ttdeci">std::vector&lt; T &gt; keepItems(const std::vector&lt; T &gt; &amp;aivector_b, std::vector&lt; uintidx &gt; &amp;aivectorcidx_items)</div><div class="ttdef"><b>Definition:</b> <a href="vector__utils_8hpp_source.html#l00083">vector_utils.hpp:83</a></div></div>
<div class="ttc" id="classds_1_1_iterator_partition_linked_html_a1a031c033d0d2d1c6982ced4e0473831"><div class="ttname"><a href="classds_1_1_iterator_partition_linked.html#a1a031c033d0d2d1c6982ced4e0473831">ds::IteratorPartitionLinked::getValue</a></div><div class="ttdeci">uintidx getValue()</div><div class="ttdef"><b>Definition:</b> <a href="partition__linked_8hpp_source.html#l00389">partition_linked.hpp:389</a></div></div>
<div class="ttc" id="chromosome__withrownull_8hpp_html"><div class="ttname"><a href="chromosome__withrownull_8hpp.html">chromosome_withrownull.hpp</a></div><div class="ttdoc">chromosome with row null</div></div>
<div class="ttc" id="namespaceinterfacesse_html_a144ebf70bf38495c3de1aca2c8365e08"><div class="ttname"><a href="namespaceinterfacesse.html#a144ebf70bf38495c3de1aca2c8365e08">interfacesse::scal</a></div><div class="ttdeci">void scal(T *aoarrayt_x, const T ait_alpha, const uintidx aiui_lengthArray)</div><div class="ttdoc">scal items of the array of type T</div><div class="ttdef"><b>Definition:</b> <a href="interface__level1_8hpp_source.html#l00276">interface_level1.hpp:276</a></div></div>
<div class="ttc" id="classdata_1_1_instance_html_a90d1eaeb66cc1470bbfdb95434fdb761"><div class="ttname"><a href="classdata_1_1_instance.html#a90d1eaeb66cc1470bbfdb95434fdb761">data::Instance::getNumDimensions</a></div><div class="ttdeci">static uintidx getNumDimensions()</div><div class="ttdef"><b>Definition:</b> <a href="instance_8hpp_source.html#l00145">instance.hpp:145</a></div></div>
<div class="ttc" id="namespaceinterfacesse_html_a0569818171fd8f88efe5d7f86e6e0b5d"><div class="ttname"><a href="namespaceinterfacesse.html#a0569818171fd8f88efe5d7f86e6e0b5d">interfacesse::aysxpy</a></div><div class="ttdeci">void aysxpy(T *aoarrayt_y, const T ait_alpha, const T *aiarrayt_x, const uintidx aiui_lengthArray)</div><div class="ttdoc">extension of xAXPY operation for T result</div><div class="ttdef"><b>Definition:</b> <a href="interface__level1_8hpp_source.html#l00420">interface_level1.hpp:420</a></div></div>
<div class="ttc" id="common_8hpp_html"><div class="ttname"><a href="common_8hpp.html">common.hpp</a></div><div class="ttdoc">common</div></div>
<div class="ttc" id="namespacegaclusteringop_html_a68b1581a21d20dc38bb0896acaf380f1"><div class="ttname"><a href="namespacegaclusteringop.html#a68b1581a21d20dc38bb0896acaf380f1">gaclusteringop::rearrangedCluster</a></div><div class="ttdeci">bool rearrangedCluster(gaencode::ChromosomeString&lt; T_CENTROIDS, T_REAL &gt; &amp;aochrom_YRearranged, const mat::MatrixRow&lt; T_CENTROIDS &gt; &amp;aimatrixrowt_XReferenced, const dist::Dist&lt; T_REAL, T_CENTROIDS &gt; &amp;aifunc2p_dist)</div><div class="ttdoc">Rearranged cluster .</div><div class="ttdef"><b>Definition:</b> <a href="ga__clustering__operator_8hpp_source.html#l01459">ga_clustering_operator.hpp:1459</a></div></div>
<div class="ttc" id="classmat_1_1_matrix_base_html_a70200414022ce1479b9ddc16102b12ae"><div class="ttname"><a href="classmat_1_1_matrix_base.html#a70200414022ce1479b9ddc16102b12ae">mat::MatrixBase::getNumColumns</a></div><div class="ttdeci">const uintidx getNumColumns() const</div><div class="ttdef"><b>Definition:</b> <a href="matrix__base_8hpp_source.html#l00081">matrix_base.hpp:81</a></div></div>
<div class="ttc" id="classgaencode_1_1_chromosome_g_g_a_html_acf107792536ef822d20bed243aa89160"><div class="ttname"><a href="classgaencode_1_1_chromosome_g_g_a.html#acf107792536ef822d20bed243aa89160">gaencode::ChromosomeGGA::getElementSize</a></div><div class="ttdeci">static const uintidx getElementSize()</div><div class="ttdef"><b>Definition:</b> <a href="chromosome__gga_8hpp_source.html#l00142">chromosome_gga.hpp:142</a></div></div>
<div class="ttc" id="datatype__instance__integer_8hpp_html_a54011d8dea2721bfe1dfbb12eb861fc8"><div class="ttname"><a href="datatype__instance__integer_8hpp.html#a54011d8dea2721bfe1dfbb12eb861fc8">DATATYPE_REAL</a></div><div class="ttdeci">#define DATATYPE_REAL</div><div class="ttdef"><b>Definition:</b> <a href="datatype__instance__integer_8hpp_source.html#l00040">datatype_instance_integer.hpp:40</a></div></div>
<div class="ttc" id="classmat_1_1_matrix_resizable_row_html_a9dc9ad27ad33933bfa6c0f483e24cc33"><div class="ttname"><a href="classmat_1_1_matrix_resizable_row.html#a9dc9ad27ad33933bfa6c0f483e24cc33">mat::MatrixResizableRow::getRow</a></div><div class="ttdeci">const T_FEATURE * getRow(const uintidx i) const</div><div class="ttdef"><b>Definition:</b> <a href="matrix__resizablerow_8hpp_source.html#l00296">matrix_resizablerow.hpp:296</a></div></div>
<div class="ttc" id="chromosome__cbga_8hpp_html"><div class="ttname"><a href="chromosome__cbga_8hpp.html">chromosome_cbga.hpp</a></div><div class="ttdoc">chromosome CBGA</div></div>
<div class="ttc" id="namespacegaclusteringop_html_a50fa9f176df103b249d767838b5a044c"><div class="ttname"><a href="namespacegaclusteringop.html#a50fa9f176df103b249d767838b5a044c">gaclusteringop::onePointCrossover</a></div><div class="ttdeci">void onePointCrossover(gaencode::ChromosomeMatrixWithRowNull&lt; T_GENE, T_METRIC &gt; &amp;aiochrommwrn_child1, gaencode::ChromosomeMatrixWithRowNull&lt; T_GENE, T_METRIC &gt; &amp;aiochrommwrn_child2)</div><div class="ttdef"><b>Definition:</b> <a href="ga__clustering__operator_8hpp_source.html#l00454">ga_clustering_operator.hpp:454</a></div></div>
<div class="ttc" id="probability__distribution_8hpp_html"><div class="ttname"><a href="probability__distribution_8hpp.html">probability_distribution.hpp</a></div><div class="ttdoc">probability distribution</div></div>
<div class="ttc" id="namespacegaclusteringop_html_a76027f1493ad07ff92bdee8e07d05b15"><div class="ttname"><a href="namespacegaclusteringop.html#a76027f1493ad07ff92bdee8e07d05b15">gaclusteringop::MO1</a></div><div class="ttdeci">void MO1(gaencode::ChromFixedLength&lt; T_CLUSTERIDX, T_REAL &gt; &amp;aiochromfixlen_toMutate, mat::MatrixRow&lt; T_FEATURE &gt; &amp;aomatrixrowt_centroids, mat::MatrixRow&lt; T_FEATURE_SUM &gt; &amp;aomatrixrowt_sumInstCluster, std::vector&lt; T_INSTANCES_CLUSTER_K &gt; &amp;aovectort_numInstClusterK, INPUT_ITERATOR aiiterator_instfirst, const INPUT_ITERATOR aiiterator_instlast, const dist::Dist&lt; T_REAL, T_FEATURE &gt; &amp;aifunc2p_dist)</div><div class="ttdoc">MO1 mutation operator .</div><div class="ttdef"><b>Definition:</b> <a href="ga__clustering__operator_8hpp_source.html#l01898">ga_clustering_operator.hpp:1898</a></div></div>
<div class="ttc" id="namespaceds_html_a3aae03bcc1455a8c5549ef2a03d9c93c"><div class="ttname"><a href="namespaceds.html#a3aae03bcc1455a8c5549ef2a03d9c93c">ds::getPartitionlinked</a></div><div class="ttdeci">PartitionLinked&lt; T_CLUSTERIDX &gt; getPartitionlinked(partition::Partition&lt; T_CLUSTERIDX &gt; &amp;aipartition_clusters)</div><div class="ttdef"><b>Definition:</b> <a href="partition__linked_8hpp_source.html#l00407">partition_linked.hpp:407</a></div></div>
<div class="ttc" id="classds_1_1_bit_container_html_a4aa7926699744916d577dd1f3da39359"><div class="ttname"><a href="classds_1_1_bit_container.html#a4aa7926699744916d577dd1f3da39359">ds::BitContainer::setBit</a></div><div class="ttdeci">void setBit(uintidx i)</div><div class="ttdef"><b>Definition:</b> <a href="bit__container_8hpp_source.html#l00207">bit_container.hpp:207</a></div></div>
<div class="ttc" id="namespaceinout_html_a0c10a45877a347dec0d4ec4e5b05b828"><div class="ttname"><a href="namespaceinout.html#a0c10a45877a347dec0d4ec4e5b05b828">inout::containerprint</a></div><div class="ttdeci">void containerprint(INPUT_ITERATOR iterator_first, INPUT_ITERATOR iterator_last, std::ostream &amp;os=std::cout, const char *aipc_label=&quot;&quot;, const char aic_delimCoef=',')</div><div class="ttdef"><b>Definition:</b> <a href="container__out_8hpp_source.html#l00050">container_out.hpp:50</a></div></div>
<div class="ttc" id="classgaencode_1_1_chrom_variable_length_html_ad2f7938aabc7bb8175344e36b372934d"><div class="ttname"><a href="classgaencode_1_1_chrom_variable_length.html#ad2f7938aabc7bb8175344e36b372934d">gaencode::ChromVariableLength::getString</a></div><div class="ttdeci">virtual T_GENE * getString()</div><div class="ttdef"><b>Definition:</b> <a href="chromosome__variablelength_8hpp_source.html#l00230">chromosome_variablelength.hpp:230</a></div></div>
<div class="ttc" id="chromosome__feac_8hpp_html"><div class="ttname"><a href="chromosome__feac_8hpp.html">chromosome_feac.hpp</a></div><div class="ttdoc">chromosome FEAC  and</div></div>
<div class="ttc" id="namespacesm_html_a201c007d3707ab2ea936402fd091cf1e"><div class="ttname"><a href="namespacesm.html#a201c007d3707ab2ea936402fd091cf1e">sm::getConfusionMatrix</a></div><div class="ttdeci">auto getConfusionMatrix(INPUT_ITERATOR aiiterator_instfirst, const INPUT_ITERATOR aiiterator_instlast, partition::Partition&lt; T_CLUSTERIDX &gt; &amp;aipartition_clusters, const FUNCINSTFREQUENCY func_instfrequency, const FUNCINSTCLASS func_instclass) -&gt; ConfusionMatchingMatrix&lt; decltype(func_instfrequency(*aiiterator_instfirst))&gt;</div><div class="ttdoc">Get confusion matching matrix.</div><div class="ttdef"><b>Definition:</b> <a href="matching__matrix_8hpp_source.html#l00776">matching_matrix.hpp:776</a></div></div>
<div class="ttc" id="classgaencode_1_1_chromosome_f_e_a_c_html"><div class="ttname"><a href="classgaencode_1_1_chromosome_f_e_a_c.html">gaencode::ChromosomeFEAC</a></div><div class="ttdoc">Chromosome encoded integer string and centroids.</div><div class="ttdef"><b>Definition:</b> <a href="chromosome__feac_8hpp_source.html#l00048">chromosome_feac.hpp:48</a></div></div>
<div class="ttc" id="namespacenearest_html_a9508313369f30f2f3334215bcc46b0cd"><div class="ttname"><a href="namespacenearest.html#a9508313369f30f2f3334215bcc46b0cd">nearest::checkNullCentroidsNN</a></div><div class="ttdeci">T_CLUSTERIDX checkNullCentroidsNN(T_DIST &amp;aort_distMinCentInst, const mat::MatrixBase&lt; T_FEATURE &gt; &amp;aimatrixrowt_centroids, const T_FEATURE *aiat_instance, dist::Dist&lt; T_DIST, T_FEATURE &gt; &amp;aifunc2p_dist)</div><div class="ttdoc">Find the centroid closest to an instance and check null centroids.</div><div class="ttdef"><b>Definition:</b> <a href="nearestinstance__operator_8hpp_source.html#l00238">nearestinstance_operator.hpp:238</a></div></div>
<div class="ttc" id="ga__clustering__operator_8hpp_html_acee5944d570f2fb7efdf1d4c801b30fb"><div class="ttname"><a href="ga__clustering__operator_8hpp.html#acee5944d570f2fb7efdf1d4c801b30fb">gmt19937_eng</a></div><div class="ttdeci">StdMT19937 gmt19937_eng</div><div class="ttdef"><b>Definition:</b> <a href="random__ext_8hpp_source.html#l00063">random_ext.hpp:63</a></div></div>
<div class="ttc" id="classgaencode_1_1_chromosome_g_g_a_html_aa8e83da69a7ab90e13da04fe9500103a"><div class="ttname"><a href="classgaencode_1_1_chromosome_g_g_a.html#aa8e83da69a7ab90e13da04fe9500103a">gaencode::ChromosomeGGA::initializeGroupSec</a></div><div class="ttdeci">void initializeGroupSec()</div><div class="ttdef"><b>Definition:</b> <a href="chromosome__gga_8hpp_source.html#l00148">chromosome_gga.hpp:148</a></div></div>
<div class="ttc" id="classpartition_1_1_partition_label_html_a260d6aa7a44d081cd05d8566f90c9405"><div class="ttname"><a href="classpartition_1_1_partition_label.html#a260d6aa7a44d081cd05d8566f90c9405">partition::PartitionLabel::print</a></div><div class="ttdeci">virtual void print(std::ostream &amp;os=std::cout, const char *aipc_label=&quot;&quot;, const char aic_delimCoef=',')</div><div class="ttdef"><b>Definition:</b> <a href="partition__label_8hpp_source.html#l00101">partition_label.hpp:101</a></div></div>
<div class="ttc" id="classgaencode_1_1_chrom_variable_length_html_ad9aade851fa130ddc0fb16a1dd9a15e1"><div class="ttname"><a href="classgaencode_1_1_chrom_variable_length.html#ad9aade851fa130ddc0fb16a1dd9a15e1">gaencode::ChromVariableLength::print</a></div><div class="ttdeci">virtual void print(std::ostream &amp;os=std::cout, const char *aipc_label=&quot;&quot;, const char aic_delimCoef=',', const char aic_delimRow=';') const</div><div class="ttdef"><b>Definition:</b> <a href="chromosome__variablelength_8hpp_source.html#l00263">chromosome_variablelength.hpp:263</a></div></div>
<div class="ttc" id="namespaceclusteringop_html_a3b44507749ee74e3ef4cb30ea4c8ed6f"><div class="ttname"><a href="namespaceclusteringop.html#a3b44507749ee74e3ef4cb30ea4c8ed6f">clusteringop::updateClusterCj</a></div><div class="ttdeci">void updateClusterCj(mat::MatrixRow&lt; T_FEATURE &gt; &amp;aiomatrixt_centroids, mat::MatrixRow&lt; T_FEATURE_SUM &gt; &amp;aiomatrixt_sumInstCluster, std::vector&lt; T_INSTANCES_CLUSTER_K &gt; &amp;aovectorit_numInstClusterK, T_CLUSTERIDX *aioarraycidx_memberShip, T_CLUSTERIDX aicidx_Cj, std::vector&lt; T_CLUSTERIDX &gt; &amp;aivectorcidx_clustersNew, INPUT_ITERATOR aiiterator_instfirst, const INPUT_ITERATOR aiiterator_instlast, dist::Dist&lt; T_DIST, T_FEATURE &gt; &amp;aifunc2p_dist)</div><div class="ttdef"><b>Definition:</b> <a href="clustering__operator__centroids_8hpp_source.html#l01134">clustering_operator_centroids.hpp:1134</a></div></div>
<div class="ttc" id="linear__algebra__level2_8hpp_html"><div class="ttname"><a href="linear__algebra__level2_8hpp.html">linear_algebra_level2.hpp</a></div><div class="ttdoc">linear algebra level 2</div></div>
<div class="ttc" id="classsm_1_1_confusion_matching_matrix_html"><div class="ttname"><a href="classsm_1_1_confusion_matching_matrix.html">sm::ConfusionMatchingMatrix</a></div><div class="ttdoc">Confusion Matching Matrix also known as an error matrix, is a specific table layout that allows visua...</div><div class="ttdef"><b>Definition:</b> <a href="matching__matrix_8hpp_source.html#l00608">matching_matrix.hpp:608</a></div></div>
<div class="ttc" id="classds_1_1_partition_linked_stats_html_acb60261685a91301a4d7a5c046375e31"><div class="ttname"><a href="classds_1_1_partition_linked_stats.html#acb60261685a91301a4d7a5c046375e31">ds::PartitionLinkedStats::getMemberShip</a></div><div class="ttdeci">T_CLUSTERIDX getMemberShip(const uintidx aiui_idxinstanceI) const</div><div class="ttdef"><b>Definition:</b> <a href="partition__linked__stats_8hpp_source.html#l00243">partition_linked_stats.hpp:243</a></div></div>
<div class="ttc" id="clustering__common_8hpp_html_a24b99685a442a97eb2ae902d09fb8f88"><div class="ttname"><a href="clustering__common_8hpp.html#a24b99685a442a97eb2ae902d09fb8f88">UNKNOWN_CLUSTER_IDX</a></div><div class="ttdeci">#define UNKNOWN_CLUSTER_IDX</div><div class="ttdef"><b>Definition:</b> <a href="clustering__common_8hpp_source.html#l00016">clustering_common.hpp:16</a></div></div>
<div class="ttc" id="namespaceprob_html_a15090755bafc59aa295f2d02be64af8c"><div class="ttname"><a href="namespaceprob.html#a15090755bafc59aa295f2d02be64af8c">prob::getWithoutRepeatsSet</a></div><div class="ttdeci">auto getWithoutRepeatsSet(const uintidx aiuintidx_numbersToGenerate, FUNCTION function_generate) -&gt; std::unordered_set&lt; decltype(function_generate())&gt;</div><div class="ttdoc">Get a set of random number diferent.</div><div class="ttdef"><b>Definition:</b> <a href="probability__selection_8hpp_source.html#l00215">probability_selection.hpp:215</a></div></div>
<div class="ttc" id="namespaceinterfacesse_html_aa4b94bf2bf8cb7c437fa3feba8b70ff8"><div class="ttname"><a href="namespaceinterfacesse.html#aa4b94bf2bf8cb7c437fa3feba8b70ff8">interfacesse::copya</a></div><div class="ttdeci">void copya(T *aoarrayt_x, const T ait_alpha, const uintidx aiui_lengthArray)</div><div class="ttdoc">Initializes the array with a constant .</div><div class="ttdef"><b>Definition:</b> <a href="interface__level1_8hpp_source.html#l00046">interface_level1.hpp:46</a></div></div>
<div class="ttc" id="namespacegaclusteringop_html_abc19797156931b073030d9a58175d0c9"><div class="ttname"><a href="namespacegaclusteringop.html#abc19797156931b073030d9a58175d0c9">gaclusteringop::mergeCrossover</a></div><div class="ttdeci">gaencode::ChromosomeGGA&lt; T_CLUSTERIDX, T_METRIC &gt; mergeCrossover(gaencode::ChromosomeGGA&lt; T_CLUSTERIDX, T_METRIC &gt; &amp;aichrom_parent1, gaencode::ChromosomeGGA&lt; T_CLUSTERIDX, T_METRIC &gt; &amp;aichrom_parent2)</div><div class="ttdoc">mergeCrossover</div><div class="ttdef"><b>Definition:</b> <a href="ga__clustering__operator_8hpp_source.html#l00518">ga_clustering_operator.hpp:518</a></div></div>
<div class="ttc" id="linear__algebra__level1_8hpp_html"><div class="ttname"><a href="linear__algebra__level1_8hpp.html">linear_algebra_level1.hpp</a></div><div class="ttdoc">linear algebra level1</div></div>
<div class="ttc" id="namespacegaclusteringop_html_abf115dc68f58f8d8fdb72e7c679766c3"><div class="ttname"><a href="namespacegaclusteringop.html#abf115dc68f58f8d8fdb72e7c679766c3">gaclusteringop::biDirectionHMutation</a></div><div class="ttdeci">void biDirectionHMutation(gaencode::ChromosomeString&lt; T_GENE, T_METRIC &gt; &amp;aiochromstr_toMutate, const T_METRIC airt_minObjetiveFunc, const T_METRIC airt_maxObjetiveFunc, const T_GENE *aiarrayt_minFeatures, const T_GENE *aiarrayt_maxFeatures)</div><div class="ttdoc">biDirectionHMutation</div><div class="ttdef"><b>Definition:</b> <a href="ga__clustering__operator_8hpp_source.html#l01209">ga_clustering_operator.hpp:1209</a></div></div>
<div class="ttc" id="classmat_1_1_matrix_row_html_a5391a205367fbaac82a26ddc377a80af"><div class="ttname"><a href="classmat_1_1_matrix_row.html#a5391a205367fbaac82a26ddc377a80af">mat::MatrixRow::getRow</a></div><div class="ttdeci">const T_FEATURE * getRow(const uintidx i) const</div><div class="ttdef"><b>Definition:</b> <a href="matrix_8hpp_source.html#l00181">matrix.hpp:181</a></div></div>
<div class="ttc" id="nearestinstance__operator_8hpp_html_ac6dfec13abcffd9b8f8abd4ad0cf6f11"><div class="ttname"><a href="nearestinstance__operator_8hpp.html#ac6dfec13abcffd9b8f8abd4ad0cf6f11">NEARESTCENTROID_UNKNOWN</a></div><div class="ttdeci">#define NEARESTCENTROID_UNKNOWN</div><div class="ttdef"><b>Definition:</b> <a href="nearestinstance__operator_8hpp_source.html#l00035">nearestinstance_operator.hpp:35</a></div></div>
<div class="ttc" id="classgaencode_1_1_chrom_fixed_length_html"><div class="ttname"><a href="classgaencode_1_1_chrom_fixed_length.html">gaencode::ChromFixedLength</a></div><div class="ttdoc">Chromosome with fixed length string.</div><div class="ttdef"><b>Definition:</b> <a href="chromosome__fixedlength_8hpp_source.html#l00044">chromosome_fixedlength.hpp:44</a></div></div>
<div class="ttc" id="classgaencode_1_1_chrom_fixed_length_html_a2d0b4e4d46c2f224ce34cf795407b407"><div class="ttname"><a href="classgaencode_1_1_chrom_fixed_length.html#a2d0b4e4d46c2f224ce34cf795407b407">gaencode::ChromFixedLength::print</a></div><div class="ttdeci">virtual void print(std::ostream &amp;os=std::cout, const char *aipc_label=&quot;&quot;, const char aic_delimCoef=',', const char aic_delimRow=';') const</div><div class="ttdef"><b>Definition:</b> <a href="chromosome__fixedlength_8hpp_source.html#l00258">chromosome_fixedlength.hpp:258</a></div></div>
<div class="ttc" id="classgaencode_1_1_chromosome_g_g_a_html_a1b069cf9c5179f7aff064081f72aefb6"><div class="ttname"><a href="classgaencode_1_1_chromosome_g_g_a.html#a1b069cf9c5179f7aff064081f72aefb6">gaencode::ChromosomeGGA::print</a></div><div class="ttdeci">virtual void print(std::ostream &amp;os=std::cout, const char *aipc_label=&quot;&quot;, const char aic_delimCoef=',', const char aic_delimRow=';') const</div><div class="ttdef"><b>Definition:</b> <a href="chromosome__gga_8hpp_source.html#l00358">chromosome_gga.hpp:358</a></div></div>
<div class="ttc" id="probability__selection_8hpp_html"><div class="ttname"><a href="probability__selection_8hpp.html">probability_selection.hpp</a></div><div class="ttdoc">probability selection</div></div>
<div class="ttc" id="namespaceprob_html_a9c4a6edf88cebc3b48d1cdf7d2f23e6e"><div class="ttname"><a href="namespaceprob.html#a9c4a6edf88cebc3b48d1cdf7d2f23e6e">prob::getIdxPairUnlikeRoulette</a></div><div class="ttdeci">std::pair&lt; uintidx, uintidx &gt; getIdxPairUnlikeRoulette(const std::vector&lt; T_PROBABILITY &gt; &amp;aivectorrt_probDist, uintidx aiuintidx_begins)</div><div class="ttdoc">Selection a pair random index in [IdxBegin,n].</div><div class="ttdef"><b>Definition:</b> <a href="probability__selection_8hpp_source.html#l00064">probability_selection.hpp:64</a></div></div>
<div class="ttc" id="namespaceum_html_a1fa2ec9d0840e8dbfa3d2737a5615b11"><div class="ttname"><a href="namespaceum.html#a1fa2ec9d0840e8dbfa3d2737a5615b11">um::simplifiedSilhouette</a></div><div class="ttdeci">std::vector&lt; T_METRIC &gt; simplifiedSilhouette(const mat::MatrixBase&lt; T_FEATURE &gt; &amp;aimatrixt_centroids, INPUT_ITERATOR aiiterator_instfirst, const INPUT_ITERATOR aiiterator_instlast, partition::Partition&lt; T_CLUSTERIDX &gt; &amp;aipartition_clusters, const std::vector&lt; T_INSTANCES_CLUSTER_K &gt; &amp;aivectorit_numInstClusterK, const dist::Dist&lt; T_METRIC, T_FEATURE &gt; &amp;aifunc2p_dist)</div><div class="ttdoc">Simplified Silhouette .</div><div class="ttdef"><b>Definition:</b> <a href="unsupervised__measures_8hpp_source.html#l03145">unsupervised_measures.hpp:3145</a></div></div>
<div class="ttc" id="namespacegaclusteringop_html_a3ecbd55894b1ddbc7bf49a22df7cde00"><div class="ttname"><a href="namespacegaclusteringop.html#a3ecbd55894b1ddbc7bf49a22df7cde00">gaclusteringop::merge</a></div><div class="ttdeci">void merge(gaencode::ChromosomeCBGA&lt; T_FEATURE, T_CLUSTERIDX, T_INSTANCE_FREQUENCY, T_INSTANCES_CLUSTER_K, T_FEATURE_SUM, T_REAL &gt; &amp;aiochromcbga_offspring, gaencode::ChromosomeCBGA&lt; T_FEATURE, T_CLUSTERIDX, T_INSTANCE_FREQUENCY, T_INSTANCES_CLUSTER_K, T_FEATURE_SUM, T_REAL &gt; &amp;aiochromcbga_part1, gaencode::ChromosomeCBGA&lt; T_FEATURE, T_CLUSTERIDX, T_INSTANCE_FREQUENCY, T_INSTANCES_CLUSTER_K, T_FEATURE_SUM, T_REAL &gt; &amp;aiochromcbga_part2, INPUT_ITERATOR aiiterator_instfirst, const INPUT_ITERATOR aiiterator_instlast, const dist::Dist&lt; T_REAL, T_FEATURE &gt; &amp;aifunc2p_dist)</div><div class="ttdoc">Merge two chomosomas.</div><div class="ttdef"><b>Definition:</b> <a href="ga__clustering__operator_8hpp_source.html#l00168">ga_clustering_operator.hpp:168</a></div></div>
<div class="ttc" id="structdist_1_1_dist_html"><div class="ttname"><a href="structdist_1_1_dist.html">dist::Dist</a></div><div class="ttdoc">Generic dist.</div><div class="ttdef"><b>Definition:</b> <a href="dist_8hpp_source.html#l00034">dist.hpp:34</a></div></div>
<div class="ttc" id="namespaceinterfacesse_html_a948123152e5a1224ca48861b25b6dc0e"><div class="ttname"><a href="namespaceinterfacesse.html#a948123152e5a1224ca48861b25b6dc0e">interfacesse::scalInv</a></div><div class="ttdeci">void scalInv(T_INT1 *aoarrayint1_x, const T_INT2 ait_alpha, const uintidx aiui_lengthArray)</div><div class="ttdef"><b>Definition:</b> <a href="interface__level1_8hpp_source.html#l00328">interface_level1.hpp:328</a></div></div>
<div class="ttc" id="namespaceinterfacesse_html_afaa45a2a27710ea2dfa979289cf4961d"><div class="ttname"><a href="namespaceinterfacesse.html#afaa45a2a27710ea2dfa979289cf4961d">interfacesse::swap</a></div><div class="ttdeci">void swap(T *aoarrayt_y, T *aiarrayt_x, const uintidx aiui_lengthArray)</div><div class="ttdoc">swap items of aoarrayt_y to aiarrayt_x</div><div class="ttdef"><b>Definition:</b> <a href="interface__level1_8hpp_source.html#l00091">interface_level1.hpp:91</a></div></div>
<div class="ttc" id="classgaencode_1_1_chromosome_string_html"><div class="ttname"><a href="classgaencode_1_1_chromosome_string.html">gaencode::ChromosomeString</a></div><div class="ttdoc">Chhromosome String define Chromosome encode for an string.</div><div class="ttdef"><b>Definition:</b> <a href="chromosome__string_8hpp_source.html#l00043">chromosome_string.hpp:43</a></div></div>
<div class="ttc" id="namespacegaclusteringop_html_a3c99bd6485c6e3a0daf93aa53a97edb9"><div class="ttname"><a href="namespacegaclusteringop.html#a3c99bd6485c6e3a0daf93aa53a97edb9">gaclusteringop::MO2</a></div><div class="ttdeci">void MO2(gaencode::ChromFixedLength&lt; T_CLUSTERIDX, T_REAL &gt; &amp;aiochromfixlen_toMutate, const INPUT_ITERATOR aiiterator_instfirst, const dist::Dist&lt; T_REAL, T_FEATURE &gt; &amp;aifunc2p_dist)</div><div class="ttdef"><b>Definition:</b> <a href="ga__clustering__operator_8hpp_source.html#l02046">ga_clustering_operator.hpp:2046</a></div></div>
<div class="ttc" id="namespacegaclusteringop_html_a08e44d7c579743d81b7f23d0c09e4414"><div class="ttname"><a href="namespacegaclusteringop.html#a08e44d7c579743d81b7f23d0c09e4414">gaclusteringop::crossPNNnew</a></div><div class="ttdeci">void crossPNNnew(gaencode::ChromosomeCBGA&lt; T_FEATURE, T_CLUSTERIDX, T_INSTANCE_FREQUENCY, T_INSTANCES_CLUSTER_K, T_FEATURE_SUM, T_REAL &gt; &amp;aochromcbga_new, gaencode::ChromosomeCBGA&lt; T_FEATURE, T_CLUSTERIDX, T_INSTANCE_FREQUENCY, T_INSTANCES_CLUSTER_K, T_FEATURE_SUM, T_REAL &gt; &amp;aichromcbga_old1, gaencode::ChromosomeCBGA&lt; T_FEATURE, T_CLUSTERIDX, T_INSTANCE_FREQUENCY, T_INSTANCES_CLUSTER_K, T_FEATURE_SUM, T_REAL &gt; &amp;aichromcbga_old2, INPUT_ITERATOR aiiterator_instfirst, const INPUT_ITERATOR aiiterator_instlast, const T_CLUSTERIDX aicidx_numclusterKToReduce, const dist::Dist&lt; T_REAL, T_FEATURE &gt; &amp;aifunc2p_dist)</div><div class="ttdef"><b>Definition:</b> <a href="ga__clustering__operator_8hpp_source.html#l00339">ga_clustering_operator.hpp:339</a></div></div>
<div class="ttc" id="classdata_1_1_instance_freq_html"><div class="ttname"><a href="classdata_1_1_instance_freq.html">data::InstanceFreq</a></div><div class="ttdoc">Patterns, usually vectors in a multidimensional space, with an attribute to store occurrences of inst...</div><div class="ttdef"><b>Definition:</b> <a href="instance__frequency_8hpp_source.html#l00034">instance_frequency.hpp:34</a></div></div>
<div class="ttc" id="namespaceclusteringop_html_a8dda4c828d8ffde2aff08eb40dc35190"><div class="ttname"><a href="namespaceclusteringop.html#a8dda4c828d8ffde2aff08eb40dc35190">clusteringop::pnnFast</a></div><div class="ttdeci">void pnnFast(ds::PartitionLinkedStats&lt; T_FEATURE, T_CLUSTERIDX, T_INSTANCE_FREQUENCY, T_INSTANCES_CLUSTER_K, T_FEATURE_SUM &gt; &amp;aoipartlinkstats_partition, mat::MatrixResizableRow&lt; T_FEATURE, T_INSTANCES_CLUSTER_K &gt; &amp;aiomatrixresizerow_centroids, INPUT_ITERATOR aiiterator_instfirst, const INPUT_ITERATOR aiiterator_instlast, const T_CLUSTERIDX aicidx_numclusterKToReduce, const dist::Dist&lt; T_DIST, T_FEATURE &gt; &amp;aifunc2p_dist)</div><div class="ttdef"><b>Definition:</b> <a href="clustering__operator__centroids_8hpp_source.html#l02044">clustering_operator_centroids.hpp:2044</a></div></div>
<div class="ttc" id="classgaencode_1_1_chrom_fixed_length_html_a014e2a6eac1f0dc7655e37b2a8355a4e"><div class="ttname"><a href="classgaencode_1_1_chrom_fixed_length.html#a014e2a6eac1f0dc7655e37b2a8355a4e">gaencode::ChromFixedLength::end</a></div><div class="ttdeci">T_GENE * end()</div><div class="ttdef"><b>Definition:</b> <a href="chromosome__fixedlength_8hpp_source.html#l00216">chromosome_fixedlength.hpp:216</a></div></div>
<div class="ttc" id="chromosome__gga_8hpp_html"><div class="ttname"><a href="chromosome__gga_8hpp.html">chromosome_gga.hpp</a></div><div class="ttdoc">chromosome GGA</div></div>
<div class="ttc" id="random__ext_8hpp_html_a096d42d6e488c0b0de08cd7c24ec0099"><div class="ttname"><a href="random__ext_8hpp.html#a096d42d6e488c0b0de08cd7c24ec0099">StdMT19937</a></div><div class="ttdeci">std::mt19937 StdMT19937</div><div class="ttdef"><b>Definition:</b> <a href="random__ext_8hpp_source.html#l00060">random_ext.hpp:60</a></div></div>
<div class="ttc" id="namespaceprob_html_aa737d76e6416a765f004cd211eff712d"><div class="ttname"><a href="namespaceprob.html#aa737d76e6416a765f004cd211eff712d">prob::makeDistRouletteWheel</a></div><div class="ttdeci">auto makeDistRouletteWheel(INPUT_ITERATOR aiiterator_instfirst, INPUT_ITERATOR aiiterator_instlast, const FITNESSOPERATION fitness_func) -&gt; std::vector&lt; decltype(fitness_func(*aiiterator_instfirst))&gt;</div><div class="ttdef"><b>Definition:</b> <a href="probability__distribution_8hpp_source.html#l00071">probability_distribution.hpp:71</a></div></div>
<div class="ttc" id="verbose__global_8hpp_html"><div class="ttname"><a href="verbose__global_8hpp.html">verbose_global.hpp</a></div><div class="ttdoc">verbose global</div></div>
<div class="ttc" id="classgaencode_1_1_chromosome_string_html_a53164831ecb42560c000f529dcccf4c6"><div class="ttname"><a href="classgaencode_1_1_chromosome_string.html#a53164831ecb42560c000f529dcccf4c6">gaencode::ChromosomeString::getStringSize</a></div><div class="ttdeci">virtual const uintidx getStringSize() const =0</div></div>
<div class="ttc" id="namespacegaclusteringop_html_a5c9d8a0cc06ff5663e3fb5c186e852cd"><div class="ttname"><a href="namespacegaclusteringop.html#a5c9d8a0cc06ff5663e3fb5c186e852cd">gaclusteringop::crossoverCGA</a></div><div class="ttdeci">void crossoverCGA(gaencode::ChromFixedLength&lt; T_CLUSTERIDX, T_REAL &gt; &amp;aochrom_childC, gaencode::ChromFixedLength&lt; T_CLUSTERIDX, T_REAL &gt; &amp;aichrom_parentA, gaencode::ChromFixedLength&lt; T_CLUSTERIDX, T_REAL &gt; &amp;aichrom_parentB, mat::MatrixRow&lt; T_FEATURE &gt; &amp;aomatrixrowt_centroids, mat::MatrixRow&lt; T_FEATURE_SUM &gt; &amp;aomatrixrowt_sumInstCluster, std::vector&lt; T_INSTANCES_CLUSTER_K &gt; &amp;aovectort_numInstClusterK, INPUT_ITERATOR aiiterator_instfirst, const INPUT_ITERATOR aiiterator_instlast, const dist::Dist&lt; T_REAL, T_FEATURE &gt; &amp;aifunc2p_dist)</div><div class="ttdef"><b>Definition:</b> <a href="ga__clustering__operator_8hpp_source.html#l00690">ga_clustering_operator.hpp:690</a></div></div>
<div class="ttc" id="classgaencode_1_1_chromosome_g_g_a_html_a1aa4f8c78e0de3afba730450847ac464"><div class="ttname"><a href="classgaencode_1_1_chromosome_g_g_a.html#a1aa4f8c78e0de3afba730450847ac464">gaencode::ChromosomeGGA::increaseGroupSecSize</a></div><div class="ttdeci">void increaseGroupSecSize()</div><div class="ttdef"><b>Definition:</b> <a href="chromosome__gga_8hpp_source.html#l00266">chromosome_gga.hpp:266</a></div></div>
<div class="ttc" id="classgaencode_1_1_chromosome_string_html_a95cc85a28caac393e63c98c6c1f3cde2"><div class="ttname"><a href="classgaencode_1_1_chromosome_string.html#a95cc85a28caac393e63c98c6c1f3cde2">gaencode::ChromosomeString::getString</a></div><div class="ttdeci">virtual T_GENE * getString()=0</div></div>
<div class="ttc" id="chromosome__variablelength_8hpp_html"><div class="ttname"><a href="chromosome__variablelength_8hpp.html">chromosome_variablelength.hpp</a></div><div class="ttdoc">chromosome variable length</div></div>
<div class="ttc" id="classds_1_1_iterator_partition_linked_html_af0e179fae69c0d4f047082ee44783613"><div class="ttname"><a href="classds_1_1_iterator_partition_linked.html#af0e179fae69c0d4f047082ee44783613">ds::IteratorPartitionLinked::end</a></div><div class="ttdeci">bool end()</div><div class="ttdef"><b>Definition:</b> <a href="partition__linked_8hpp_source.html#l00384">partition_linked.hpp:384</a></div></div>
<div class="ttc" id="namespacegaclusteringop_html_a394e5de28006937d308d2659683c2cc6"><div class="ttname"><a href="namespacegaclusteringop.html#a394e5de28006937d308d2659683c2cc6">gaclusteringop::kmeansfeac</a></div><div class="ttdeci">void kmeansfeac(gaencode::ChromosomeFEAC&lt; T_CLUSTERIDX, T_REAL, T_FEATURE, T_FEATURE_SUM, T_INSTANCES_CLUSTER_K &gt; &amp;aochrom_feac, INPUT_ITERATOR aiiterator_instfirst, const INPUT_ITERATOR aiiterator_instlast, T_COMMON_IDOMAIN aiit_kmeansNumMaxIter, T_FEATURE airt_kmeansMaxDiffCent, dist::Dist&lt; T_REAL, T_FEATURE &gt; &amp;aifunc2p_dist)</div><div class="ttdef"><b>Definition:</b> <a href="ga__clustering__operator_8hpp_source.html#l01590">ga_clustering_operator.hpp:1590</a></div></div>
<div class="ttc" id="classmat_1_1_matrix_with_row_null_html_ac74d2b769f581b11e7b125d2a8ab3f06"><div class="ttname"><a href="classmat_1_1_matrix_with_row_null.html#ac74d2b769f581b11e7b125d2a8ab3f06">mat::MatrixWithRowNull::getRow</a></div><div class="ttdeci">T * getRow(uintidx i)</div><div class="ttdef"><b>Definition:</b> <a href="matrix__withrownull_8hpp_source.html#l00171">matrix_withrownull.hpp:171</a></div></div>
<div class="ttc" id="namespacegaclusteringop_html_aaa952213684dbb755ec6d44b3c783f60"><div class="ttname"><a href="namespacegaclusteringop.html#aaa952213684dbb755ec6d44b3c783f60">gaclusteringop::randomMutation</a></div><div class="ttdeci">void randomMutation(gaencode::ChromosomeMatrixWithRowNull&lt; T_FEATURE, T_REAL &gt; &amp;aiochromatrixwrn_toMutate)</div><div class="ttdoc">Random mutation .</div><div class="ttdef"><b>Definition:</b> <a href="ga__clustering__operator_8hpp_source.html#l01120">ga_clustering_operator.hpp:1120</a></div></div>
<div class="ttc" id="classmat_1_1_matrix_resizable_row_html"><div class="ttname"><a href="classmat_1_1_matrix_resizable_row.html">mat::MatrixResizableRow&lt; T_FEATURE, T_INSTANCES_CLUSTER_K &gt;</a></div></div>
<div class="ttc" id="ga__integer__operator_8hpp_html"><div class="ttname"><a href="ga__integer__operator_8hpp.html">ga_integer_operator.hpp</a></div><div class="ttdoc">genetic integer operators</div></div>
<div class="ttc" id="classgaencode_1_1_chromosome_matrix_with_row_null_html"><div class="ttname"><a href="classgaencode_1_1_chromosome_matrix_with_row_null.html">gaencode::ChromosomeMatrixWithRowNull</a></div><div class="ttdoc">Matrix with row null chromosome.</div><div class="ttdef"><b>Definition:</b> <a href="chromosome__withrownull_8hpp_source.html#l00033">chromosome_withrownull.hpp:33</a></div></div>
<div class="ttc" id="classdata_1_1_instance_class_html"><div class="ttname"><a href="classdata_1_1_instance_class.html">data::InstanceClass</a></div><div class="ttdoc">Patterns, usually vectors in a multidimensional space, previamente clasificado.</div><div class="ttdef"><b>Definition:</b> <a href="instance__class_8hpp_source.html#l00035">instance_class.hpp:35</a></div></div>
<div class="ttc" id="namespacegaclusteringop_html_a182c10ea30b952abe8b98ae7e83f6938"><div class="ttname"><a href="namespacegaclusteringop.html#a182c10ea30b952abe8b98ae7e83f6938">gaclusteringop::newChromosome</a></div><div class="ttdeci">gaencode::ChromVariableLength&lt; T_FEATURE, T_REAL &gt; * newChromosome(mat::MatrixRow&lt; T_FEATURE &gt; &amp;aimatrixrowt_minMaxKSegments, T_REAL airt_fitnessInitial, T_REAL airt_objetiveInitial)</div><div class="ttdoc">Create new chromosome .</div><div class="ttdef"><b>Definition:</b> <a href="ga__clustering__operator_8hpp_source.html#l00069">ga_clustering_operator.hpp:69</a></div></div>
<div class="ttc" id="namespacenearest_html_a23db35c89871abd7e5d41a36bc779064"><div class="ttname"><a href="namespacenearest.html#a23db35c89871abd7e5d41a36bc779064">nearest::farthestInstanceFromS1</a></div><div class="ttdeci">uintidx farthestInstanceFromS1(const uintidx aiuintidx_S1, ITERATOR_IDXINST aiiterator_idxInstfirst, ITERATOR_IDXINST aiiterator_idxInstlast, const INPUT_ITERATOR aiiterator_instfirst, const dist::Dist&lt; T_DIST, T_FEATURE &gt; &amp;aifunc2p_dist)</div><div class="ttdef"><b>Definition:</b> <a href="nearestinstance__operator_8hpp_source.html#l00055">nearestinstance_operator.hpp:55</a></div></div>
<div class="ttc" id="classgaencode_1_1_chrom_variable_length_html"><div class="ttname"><a href="classgaencode_1_1_chrom_variable_length.html">gaencode::ChromVariableLength</a></div><div class="ttdoc">Chromosome with variable length string.</div><div class="ttdef"><b>Definition:</b> <a href="chromosome__variablelength_8hpp_source.html#l00042">chromosome_variablelength.hpp:42</a></div></div>
<div class="ttc" id="classmat_1_1_matrix_with_row_null_html_a4e85c7751adcdd38783e163d5592d001"><div class="ttname"><a href="classmat_1_1_matrix_with_row_null.html#a4e85c7751adcdd38783e163d5592d001">mat::MatrixWithRowNull::keepRows</a></div><div class="ttdeci">void keepRows(std::vector&lt; uintidx &gt; &amp;aivectorT_idxRow)</div><div class="ttdef"><b>Definition:</b> <a href="matrix__withrownull_8hpp_source.html#l00255">matrix_withrownull.hpp:255</a></div></div>
<div class="ttc" id="namespacegaintegerop_html_ac5569129f257484a01a32fca9ef280cd"><div class="ttname"><a href="namespacegaintegerop.html#ac5569129f257484a01a32fca9ef280cd">gaintegerop::labelKeep</a></div><div class="ttdeci">void labelKeep(gaencode::ChromosomeString&lt; T_INTEGER, T_METRIC &gt; &amp;aochrom_relabel, std::vector&lt; uintidx &gt; &amp;aivectorcidx_clustersKeep)</div><div class="ttdoc">Label keep.</div><div class="ttdef"><b>Definition:</b> <a href="ga__integer__operator_8hpp_source.html#l00058">ga_integer_operator.hpp:58</a></div></div>
<div class="ttc" id="classdata_1_1_instance_html"><div class="ttname"><a href="classdata_1_1_instance.html">data::Instance</a></div><div class="ttdoc">Patterns, usually vectors in a multidimensional space.</div><div class="ttdef"><b>Definition:</b> <a href="instance_8hpp_source.html#l00037">instance.hpp:37</a></div></div>
<div class="ttc" id="namespaceprob_html_a35475d12404b2fbba2919682ad81f85d"><div class="ttname"><a href="namespaceprob.html#a35475d12404b2fbba2919682ad81f85d">prob::linearNormalization</a></div><div class="ttdeci">void linearNormalization(INPUT_ITERATOR aiiterator_first, const INPUT_ITERATOR aiiterator_last, const FITNESSFUNCTGET fitness_funcGet, const FITNESSFUNCTSET fitness_funcSet, const decltype(fitness_funcGet(*aiiterator_first)) lrt_scale=1.0)</div><div class="ttdoc">Linear normalization.</div><div class="ttdef"><b>Definition:</b> <a href="probability__distribution_8hpp_source.html#l00199">probability_distribution.hpp:199</a></div></div>
<div class="ttc" id="namespaceinterfacesse_html_a25f6950d589b92fd5bcf2007fb3fae19"><div class="ttname"><a href="namespaceinterfacesse.html#a25f6950d589b92fd5bcf2007fb3fae19">interfacesse::sum</a></div><div class="ttdeci">T sum(const T *aoarrayt_y, const uintidx aiui_lengthArray)</div><div class="ttdef"><b>Definition:</b> <a href="interface__level1_8hpp_source.html#l00135">interface_level1.hpp:135</a></div></div>
<div class="ttc" id="namespaceclusteringop_html_ac52fbdbee047ca93bef1426d6493f31f"><div class="ttname"><a href="namespaceclusteringop.html#ac52fbdbee047ca93bef1426d6493f31f">clusteringop::getCentroids</a></div><div class="ttdeci">T_CLUSTERIDX getCentroids(mat::MatrixRow&lt; T_FEATURE &gt; &amp;aomatrixt_centroids, mat::MatrixRow&lt; T_FEATURE_SUM &gt; &amp;aomatrixt_sumInstancesCluster, std::vector&lt; T_INSTANCES_CLUSTER_K &gt; &amp;aovectort_numInstancesInClusterK, partition::Partition&lt; T_CLUSTERIDX &gt; &amp;aipartition_clusters, INPUT_ITERATOR aiiterator_instfirst, const INPUT_ITERATOR aiiterator_instlast)</div><div class="ttdef"><b>Definition:</b> <a href="clustering__operator__centroids_8hpp_source.html#l00608">clustering_operator_centroids.hpp:608</a></div></div>
<div class="ttc" id="classgaencode_1_1_chromosome_g_g_a_html_a846cdec17d362c23f8c7aa71ebc397c2"><div class="ttname"><a href="classgaencode_1_1_chromosome_g_g_a.html#a846cdec17d362c23f8c7aa71ebc397c2">gaencode::ChromosomeGGA::decrementGroupSecSize</a></div><div class="ttdeci">void decrementGroupSecSize(uintidx aiuintidx_decrement)</div><div class="ttdef"><b>Definition:</b> <a href="chromosome__gga_8hpp_source.html#l00281">chromosome_gga.hpp:281</a></div></div>
<div class="ttc" id="namespaceinterfacesse_html_ace6b5b44901bf38644ed492778c620f5"><div class="ttname"><a href="namespaceinterfacesse.html#ace6b5b44901bf38644ed492778c620f5">interfacesse::aasxpa</a></div><div class="ttdeci">void aasxpa(const T ait_alpha, T *aimatrixrowt_a, const uintidx aiui_numRows, const uintidx aiui_numColumns, const T *aoarrayt_x)</div><div class="ttdoc">For a matrix each items change for constant and a vector.</div><div class="ttdef"><b>Definition:</b> <a href="interface__level1_8hpp_source.html#l00386">interface_level1.hpp:386</a></div></div>
<div class="ttc" id="namespacegaclusteringop_html_aefe966c20e6bd3d44f0621349782cb91"><div class="ttname"><a href="namespacegaclusteringop.html#aefe966c20e6bd3d44f0621349782cb91">gaclusteringop::biDirectionMutation</a></div><div class="ttdeci">void biDirectionMutation(gaencode::ChromosomeString&lt; T_FEATURE, T_REAL &gt; &amp;aiochromstr_toMutate, const T_FEATURE *aiarrayt_minFeatures, const T_FEATURE *aiarrayt_maxFeatures)</div><div class="ttdef"><b>Definition:</b> <a href="ga__clustering__operator_8hpp_source.html#l01359">ga_clustering_operator.hpp:1359</a></div></div>
<div class="ttc" id="classgaencode_1_1_chromosome_g_g_a_html_aad4d008731eebf9615ad62aa884cc518"><div class="ttname"><a href="classgaencode_1_1_chromosome_g_g_a.html#aad4d008731eebf9615ad62aa884cc518">gaencode::ChromosomeGGA::getNumClusterK</a></div><div class="ttdeci">const T_CLUSTERIDX getNumClusterK() const</div><div class="ttdef"><b>Definition:</b> <a href="chromosome__gga_8hpp_source.html#l00254">chromosome_gga.hpp:254</a></div></div>
<div class="ttc" id="ga__selection_8hpp_html"><div class="ttname"><a href="ga__selection_8hpp.html">ga_selection.hpp</a></div><div class="ttdoc">chromosome selection method in genetic algorithms</div></div>
<div class="ttc" id="classds_1_1_iterator_partition_linked_html_a83b887be41c97dc0bdfc47a02abbc383"><div class="ttname"><a href="classds_1_1_iterator_partition_linked.html#a83b887be41c97dc0bdfc47a02abbc383">ds::IteratorPartitionLinked::next</a></div><div class="ttdeci">void next()</div><div class="ttdef"><b>Definition:</b> <a href="partition__linked_8hpp_source.html#l00378">partition_linked.hpp:378</a></div></div>
<div class="ttc" id="classgaencode_1_1_chromosome_matrix_with_row_null_html_a6ebc3be8731fb39e14355b05b89767e1"><div class="ttname"><a href="classgaencode_1_1_chromosome_matrix_with_row_null.html#a6ebc3be8731fb39e14355b05b89767e1">gaencode::ChromosomeMatrixWithRowNull::print</a></div><div class="ttdeci">virtual void print(std::ostream &amp;os=std::cout, const char *aipc_label=&quot;&quot;, const char aic_delimCoef=',', const char aic_delimRow=';') const</div><div class="ttdef"><b>Definition:</b> <a href="chromosome__withrownull_8hpp_source.html#l00198">chromosome_withrownull.hpp:198</a></div></div>
<div class="ttc" id="ga__function__objective_8hpp_html"><div class="ttname"><a href="ga__function__objective_8hpp.html">ga_function_objective.hpp</a></div><div class="ttdoc">definition of the abstract class function objective</div></div>
<div class="ttc" id="classmat_1_1_matrix_with_row_null_html_aee081e65142220cb024d5b5ee5e18b40"><div class="ttname"><a href="classmat_1_1_matrix_with_row_null.html#aee081e65142220cb024d5b5ee5e18b40">mat::MatrixWithRowNull&lt; T_GENE &gt;::combination</a></div><div class="ttdeci">void combination(uintidx aiui_numrow, mat::MatrixWithRowNull&lt; T_GENE &gt; &amp;aimatrixwrownull_b)</div><div class="ttdef"><b>Definition:</b> <a href="matrix__withrownull_8hpp_source.html#l00153">matrix_withrownull.hpp:153</a></div></div>
<div class="ttc" id="namespaceinterfacesse_html_a9dd5fb43ad8a83ee5cb2f5ba1bb2085b"><div class="ttname"><a href="namespaceinterfacesse.html#a9dd5fb43ad8a83ee5cb2f5ba1bb2085b">interfacesse::axpy</a></div><div class="ttdeci">void axpy(T_INT1 *aoarrayt_y, const T_INT2 ait_alpha, const T_INT3 *aiarrayt_x, const uintidx aiui_lengthArray)</div><div class="ttdef"><b>Definition:</b> <a href="interface__level1_8hpp_source.html#l00156">interface_level1.hpp:156</a></div></div>
<div class="ttc" id="namespaceclusteringop_html_a4cd166849eef381706813bb06e2029b4"><div class="ttname"><a href="namespaceclusteringop.html#a4cd166849eef381706813bb06e2029b4">clusteringop::setUpCuster</a></div><div class="ttdeci">void setUpCuster(T_CLUSTERIDX *aioarraycidx_memberShip, const mat::MatrixRow&lt; T_FEATURE &gt; &amp;aimatrixt_centroids, INPUT_ITERATOR aiiterator_instfirst, const INPUT_ITERATOR aiiterator_instlast, const dist::Dist&lt; T_DIST, T_FEATURE &gt; &amp;aifunc2p_dist)</div><div class="ttdoc">Set up cluster index.</div><div class="ttdef"><b>Definition:</b> <a href="clustering__operator__centroids_8hpp_source.html#l00511">clustering_operator_centroids.hpp:511</a></div></div>
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